Warning: Permanently added '18.205.191.241' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8411219-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64 Version: 1.2 PID: 10149 Logging PID: 10150 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8411219, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'c6bdf2e7ee6bcecc96277fbc4128850bccd1a608', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/COPASI', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'COPASI', 'package_version': '4.44.295-1', 'project_dirname': 'gcc-15-smoketest-3', 'project_name': 'gcc-15-smoketest-3', 'project_owner': 'dmalcolm', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/dmalcolm/gcc-15-smoketest-3/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'https://fedorapeople.org/~dmalcolm/gcc/gcc-15-mass-prebuild/$basearch', 'id': 'https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch', 'name': 'Additional repo https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch'}], 'sandbox': 'dmalcolm/gcc-15-smoketest-3--dmalcolm', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'dmalcolm', 'tags': [], 'task_id': '8411219-fedora-rawhide-aarch64', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/COPASI /var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/COPASI', '/var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI'... Running: git checkout c6bdf2e7ee6bcecc96277fbc4128850bccd1a608 -- cmd: ['git', 'checkout', 'c6bdf2e7ee6bcecc96277fbc4128850bccd1a608', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI rc: 0 stdout: stderr: Note: switching to 'c6bdf2e7ee6bcecc96277fbc4128850bccd1a608'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at c6bdf2e automatic import of COPASI Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading COPASI-Build-295.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o COPASI-Build-295.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/dmalcolm/gcc-15-smoketest-3/COPASI/COPASI-Build-295.tar.gz/md5/ec5383259bfb17abbc6002ed148fd58e/COPASI-Build-295.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 25.1M 100 25.1M 0 0 17.0M 0 0:00:01 0:00:01 --:--:-- 17.0M INFO: Reading stdout from command: md5sum COPASI-Build-295.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734536648.812070 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.13.0, NVR = mock-5.9-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734536648.812070 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI/COPASI.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734536648.812070/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734536648.812070/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/8f8b70aff0d799367f458aabb0bdb3da39c30b95dc6269fc0d81ea36e054969a/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/8f8b70aff0d799367f458aabb0bdb3da39c30b95dc6269fc0d81ea36e054969a/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1734536648.812070/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 dnf5-5.2.8.1-2.fc42.aarch64 dnf5-plugins-5.2.8.1-2.fc42.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 36.3 MiB/s | 20.9 MiB | 00m01s Copr repository 100% | 559.6 KiB/s | 23.5 KiB | 00m00s Additional repo https_fedorapeople_org 100% | 100.0 KiB/s | 15.9 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.37-1.fc42 fedora 8.2 MiB bzip2 aarch64 1.0.8-19.fc41 fedora 427.6 KiB coreutils aarch64 9.5-11.fc42 fedora 8.1 MiB cpio aarch64 2.15-2.fc41 fedora 1.2 MiB diffutils aarch64 3.10-8.fc41 fedora 2.1 MiB fedora-release-common noarch 42-0.11 fedora 19.8 KiB findutils aarch64 1:4.10.0-4.fc41 fedora 2.1 MiB gawk aarch64 5.3.0-4.fc41 fedora 4.2 MiB glibc-minimal-langpack aarch64 2.40.9000-24.fc42 fedora 0.0 B grep aarch64 3.11-9.fc41 fedora 1.1 MiB gzip aarch64 1.13-2.fc41 fedora 488.9 KiB info aarch64 7.1.1-2.fc42 fedora 613.6 KiB patch aarch64 2.7.6-25.fc41 fedora 390.6 KiB redhat-rpm-config noarch 300-1.no_annobin.0.fc42 copr_base 186.6 KiB rpm-build aarch64 4.20.0-1.fc42 fedora 1.4 MiB sed aarch64 4.9-3.fc41 fedora 1.0 MiB shadow-utils aarch64 2:4.17.0~rc1-1.fc42 fedora 4.5 MiB tar aarch64 2:1.35-4.fc41 fedora 3.1 MiB unzip aarch64 6.0-65.fc42 fedora 2.3 MiB util-linux aarch64 2.40.2-8.fc42 fedora 16.9 MiB which aarch64 2.21-42.fc41 fedora 248.2 KiB xz aarch64 1:5.6.3-2.fc42 fedora 1.5 MiB Installing dependencies: add-determinism aarch64 0.4.3-1.fc42 fedora 2.1 MiB alternatives aarch64 1.30-1.fc41 fedora 218.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs aarch64 4.0.2-1.fc41 fedora 547.4 KiB authselect aarch64 1.5.0-8.fc42 fedora 309.5 KiB authselect-libs aarch64 1.5.0-8.fc42 fedora 931.9 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils aarch64 2.43.50-9.fc42 fedora 29.4 MiB build-reproducibility-srpm-macros noarch 0.4.3-1.fc42 fedora 735.0 B bzip2-libs aarch64 1.0.8-19.fc41 fedora 200.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-3.fc42 fedora 2.6 MiB coreutils-common aarch64 9.5-11.fc42 fedora 11.2 MiB cracklib aarch64 2.9.11-6.fc41 fedora 935.0 KiB crypto-policies noarch 20241128-1.gitbb7b0b0.fc42 fedora 137.3 KiB curl aarch64 8.11.1-2.fc42 fedora 452.0 KiB cyrus-sasl-lib aarch64 2.1.28-27.fc41 fedora 3.1 MiB debugedit aarch64 5.1-2.fc42 fedora 244.2 KiB dwz aarch64 0.15-8.fc42 fedora 386.8 KiB ed aarch64 1.20.2-2.fc41 fedora 282.8 KiB efi-srpm-macros noarch 5-13.fc42 fedora 40.2 KiB elfutils aarch64 0.192-7.fc42 fedora 3.1 MiB elfutils-debuginfod-client aarch64 0.192-7.fc42 fedora 141.3 KiB elfutils-default-yama-scope noarch 0.192-7.fc42 fedora 1.8 KiB elfutils-libelf aarch64 0.192-7.fc42 fedora 1.2 MiB elfutils-libs aarch64 0.192-7.fc42 fedora 734.9 KiB fedora-gpg-keys noarch 42-0.3 fedora 126.4 KiB fedora-release noarch 42-0.11 fedora 0.0 B fedora-release-identity-basic noarch 42-0.11 fedora 719.0 B fedora-repos noarch 42-0.3 fedora 4.9 KiB fedora-repos-rawhide noarch 42-0.3 fedora 2.2 KiB file aarch64 5.45-8.fc42 fedora 139.5 KiB file-libs aarch64 5.45-8.fc42 fedora 10.0 MiB filesystem aarch64 3.18-29.fc42 fedora 106.0 B filesystem-srpm-macros noarch 3.18-29.fc42 fedora 36.1 KiB fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal aarch64 15.2-4.fc42 fedora 12.7 MiB gdbm aarch64 1:1.23-7.fc41 fedora 928.5 KiB gdbm-libs aarch64 1:1.23-7.fc41 fedora 426.0 KiB ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B glibc aarch64 2.40.9000-24.fc42 fedora 6.2 MiB glibc-common aarch64 2.40.9000-24.fc42 fedora 1.3 MiB glibc-gconv-extra aarch64 2.40.9000-24.fc42 fedora 18.3 MiB gmp aarch64 1:6.3.0-2.fc41 fedora 722.0 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-5.fc42 fedora 60.8 KiB jansson aarch64 2.14-1.fc42 fedora 221.3 KiB json-c aarch64 0.18-1.fc42 fedora 139.2 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs aarch64 1.6.3-4.fc41 fedora 226.4 KiB krb5-libs aarch64 1.21.3-3.fc42 fedora 2.6 MiB libacl aarch64 2.3.2-2.fc41 fedora 196.1 KiB libarchive aarch64 3.7.7-1.fc42 fedora 912.2 KiB libattr aarch64 2.5.2-4.fc41 fedora 196.6 KiB libblkid aarch64 2.40.2-8.fc42 fedora 418.6 KiB libbrotli aarch64 1.1.0-5.fc41 fedora 1.1 MiB libcap aarch64 2.71-1.fc42 fedora 509.8 KiB libcap-ng aarch64 0.8.5-3.fc41 fedora 417.2 KiB libcom_err aarch64 1.47.1-6.fc42 fedora 239.3 KiB libcurl aarch64 8.11.1-2.fc42 fedora 845.2 KiB libeconf aarch64 0.7.5-1.fc42 fedora 78.7 KiB libevent aarch64 2.1.12-14.fc41 fedora 1.5 MiB libfdisk aarch64 2.40.2-8.fc42 fedora 482.9 KiB libffi aarch64 3.4.6-3.fc42 fedora 282.4 KiB libgcc aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 218.8 KiB libgomp aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 501.0 KiB libidn2 aarch64 2.3.7-2.fc41 fedora 457.2 KiB libmount aarch64 2.40.2-8.fc42 fedora 483.9 KiB libnghttp2 aarch64 1.64.0-1.fc42 fedora 262.2 KiB libnsl2 aarch64 2.0.1-2.fc41 fedora 222.0 KiB libpkgconf aarch64 2.3.0-1.fc42 fedora 198.1 KiB libpsl aarch64 0.21.5-4.fc41 fedora 196.6 KiB libpwquality aarch64 1.4.5-11.fc41 fedora 1.1 MiB libselinux aarch64 3.8-0.rc1.2.fc42 fedora 195.6 KiB libsemanage aarch64 3.8-0.rc1.1.fc42 fedora 353.3 KiB libsepol aarch64 3.8-0.rc1.1.fc42 fedora 809.9 KiB libsmartcols aarch64 2.40.2-8.fc42 fedora 288.5 KiB libssh aarch64 0.11.1-1.fc42 fedora 649.6 KiB libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B libstdc++ aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 2.7 MiB libtasn1 aarch64 4.19.0-9.fc41 fedora 283.8 KiB libtirpc aarch64 1.3.6-1.fc42 fedora 212.9 KiB libtool-ltdl aarch64 2.5.4-1.fc42 copr_base 92.1 KiB libunistring aarch64 1.1-8.fc41 fedora 1.8 MiB libuuid aarch64 2.40.2-8.fc42 fedora 197.5 KiB libverto aarch64 0.3.2-9.fc41 fedora 197.5 KiB libxcrypt aarch64 4.4.36-11.fc42 fedora 271.5 KiB libxml2 aarch64 2.12.8-2.fc41 fedora 2.1 MiB libzstd aarch64 1.5.6-2.fc41 fedora 796.0 KiB lua-libs aarch64 5.4.7-1.fc42 fedora 393.1 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs aarch64 1.10.0-1.fc41 fedora 261.6 KiB mpfr aarch64 4.2.1-5.fc41 fedora 818.9 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs aarch64 6.5-2.20240629.fc41 fedora 2.2 MiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap aarch64 2.6.8-6.fc42 fedora 747.0 KiB openssl-libs aarch64 1:3.2.2-8.fc42 fedora 7.2 MiB p11-kit aarch64 0.25.5-4.fc42 fedora 2.6 MiB p11-kit-trust aarch64 0.25.5-4.fc42 fedora 655.7 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam aarch64 1.7.0-3.fc42 fedora 4.3 MiB pam-libs aarch64 1.7.0-3.fc42 fedora 223.4 KiB pcre2 aarch64 10.44-1.fc41.1 fedora 905.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf aarch64 2.3.0-1.fc42 fedora 240.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB pkgconf-pkg-config aarch64 2.3.0-1.fc42 fedora 990.0 B popt aarch64 1.19-7.fc41 fedora 272.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.16.3-1.fc42 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 fedora 500.0 B qt6-srpm-macros noarch 6.8.1-4.fc42 fedora 456.0 B readline aarch64 8.2-11.fc42 fedora 753.3 KiB rpm aarch64 4.20.0-1.fc42 fedora 3.9 MiB rpm-build-libs aarch64 4.20.0-1.fc42 fedora 262.7 KiB rpm-libs aarch64 4.20.0-1.fc42 fedora 797.9 KiB rpm-sequoia aarch64 1.7.0-3.fc42 fedora 2.2 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs aarch64 3.47.2-1.fc42 fedora 1.4 MiB systemd-libs aarch64 257-1.fc42 fedora 2.4 MiB util-linux-core aarch64 2.40.2-8.fc42 fedora 6.2 MiB xxhash-libs aarch64 0.8.2-4.fc42 fedora 212.3 KiB xz-libs aarch64 1:5.6.3-2.fc42 fedora 266.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip aarch64 3.0-42.fc42 fedora 755.7 KiB zlib-ng-compat aarch64 2.2.2-1.fc42 fedora 133.8 KiB zstd aarch64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 155 packages Total size of inbound packages is 51 MiB. Need to download 51 MiB. After this operation, 237 MiB extra will be used (install 237 MiB, remove 0 B). [ 1/155] bzip2-0:1.0.8-19.fc41.aarch64 100% | 3.9 MiB/s | 52.4 KiB | 00m00s [ 2/155] bash-0:5.2.37-1.fc42.aarch64 100% | 99.5 MiB/s | 1.8 MiB | 00m00s [ 3/155] cpio-0:2.15-2.fc41.aarch64 100% | 56.9 MiB/s | 291.3 KiB | 00m00s [ 4/155] diffutils-0:3.10-8.fc41.aarch 100% | 196.7 MiB/s | 402.9 KiB | 00m00s [ 5/155] fedora-release-common-0:42-0. 100% | 11.7 MiB/s | 23.9 KiB | 00m00s [ 6/155] coreutils-0:9.5-11.fc42.aarch 100% | 46.1 MiB/s | 1.1 MiB | 00m00s [ 7/155] findutils-1:4.10.0-4.fc41.aar 100% | 180.4 MiB/s | 554.1 KiB | 00m00s [ 8/155] gawk-0:5.3.0-4.fc41.aarch64 100% | 176.2 MiB/s | 1.1 MiB | 00m00s [ 9/155] glibc-minimal-langpack-0:2.40 100% | 29.8 MiB/s | 121.9 KiB | 00m00s [ 10/155] grep-0:3.11-9.fc41.aarch64 100% | 97.0 MiB/s | 297.9 KiB | 00m00s [ 11/155] gzip-0:1.13-2.fc41.aarch64 100% | 82.6 MiB/s | 169.1 KiB | 00m00s [ 12/155] info-0:7.1.1-2.fc42.aarch64 100% | 88.5 MiB/s | 181.3 KiB | 00m00s [ 13/155] patch-0:2.7.6-25.fc41.aarch64 100% | 62.9 MiB/s | 128.8 KiB | 00m00s [ 14/155] rpm-build-0:4.20.0-1.fc42.aar 100% | 82.1 MiB/s | 84.1 KiB | 00m00s [ 15/155] sed-0:4.9-3.fc41.aarch64 100% | 154.0 MiB/s | 315.4 KiB | 00m00s [ 16/155] shadow-utils-2:4.17.0~rc1-1.f 100% | 320.2 MiB/s | 1.3 MiB | 00m00s [ 17/155] tar-2:1.35-4.fc41.aarch64 100% | 139.1 MiB/s | 854.7 KiB | 00m00s [ 18/155] unzip-0:6.0-65.fc42.aarch64 100% | 30.2 MiB/s | 185.5 KiB | 00m00s [ 19/155] util-linux-0:2.40.2-8.fc42.aa 100% | 195.4 MiB/s | 1.2 MiB | 00m00s [ 20/155] which-0:2.21-42.fc41.aarch64 100% | 13.5 MiB/s | 41.5 KiB | 00m00s [ 21/155] xz-1:5.6.3-2.fc42.aarch64 100% | 116.2 MiB/s | 476.1 KiB | 00m00s [ 22/155] filesystem-0:3.18-29.fc42.aar 100% | 217.4 MiB/s | 1.1 MiB | 00m00s [ 23/155] redhat-rpm-config-0:300-1.no_ 100% | 9.4 MiB/s | 76.6 KiB | 00m00s [ 24/155] glibc-0:2.40.9000-24.fc42.aar 100% | 201.8 MiB/s | 1.8 MiB | 00m00s [ 25/155] bzip2-libs-0:1.0.8-19.fc41.aa 100% | 20.8 MiB/s | 42.7 KiB | 00m00s [ 26/155] ncurses-libs-0:6.5-2.20240629 100% | 53.1 MiB/s | 326.5 KiB | 00m00s [ 27/155] coreutils-common-0:9.5-11.fc4 100% | 303.2 MiB/s | 2.1 MiB | 00m00s [ 28/155] gmp-1:6.3.0-2.fc41.aarch64 100% | 37.7 MiB/s | 270.1 KiB | 00m00s [ 29/155] libacl-0:2.3.2-2.fc41.aarch64 100% | 3.5 MiB/s | 24.9 KiB | 00m00s [ 30/155] libattr-0:2.5.2-4.fc41.aarch6 100% | 17.8 MiB/s | 18.2 KiB | 00m00s [ 31/155] libcap-0:2.71-1.fc42.aarch64 100% | 84.8 MiB/s | 86.8 KiB | 00m00s [ 32/155] libselinux-0:3.8-0.rc1.2.fc42 100% | 88.2 MiB/s | 90.4 KiB | 00m00s [ 33/155] openssl-libs-1:3.2.2-8.fc42.a 100% | 364.6 MiB/s | 2.2 MiB | 00m00s [ 34/155] fedora-repos-0:42-0.3.noarch 100% | 1.8 MiB/s | 9.2 KiB | 00m00s [ 35/155] systemd-libs-0:257-1.fc42.aar 100% | 104.6 MiB/s | 749.6 KiB | 00m00s [ 36/155] mpfr-0:4.2.1-5.fc41.aarch64 100% | 105.7 MiB/s | 324.8 KiB | 00m00s [ 37/155] readline-0:8.2-11.fc42.aarch6 100% | 69.3 MiB/s | 212.7 KiB | 00m00s [ 38/155] glibc-common-0:2.40.9000-24.f 100% | 125.3 MiB/s | 385.0 KiB | 00m00s [ 39/155] pcre2-0:10.44-1.fc41.1.aarch6 100% | 73.9 MiB/s | 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libuuid-0:2.40.2-8.fc42.aarch 100% | 28.8 MiB/s | 29.5 KiB | 00m00s [ 66/155] pam-0:1.7.0-3.fc42.aarch64 100% | 273.1 MiB/s | 559.4 KiB | 00m00s [ 67/155] zlib-ng-compat-0:2.2.2-1.fc42 100% | 32.1 MiB/s | 65.7 KiB | 00m00s [ 68/155] util-linux-core-0:2.40.2-8.fc 100% | 129.9 MiB/s | 532.1 KiB | 00m00s [ 69/155] ansible-srpm-macros-0:1-16.fc 100% | 20.3 MiB/s | 20.8 KiB | 00m00s [ 70/155] xz-libs-1:5.6.3-2.fc42.aarch6 100% | 54.2 MiB/s | 111.1 KiB | 00m00s [ 71/155] build-reproducibility-srpm-ma 100% | 10.9 MiB/s | 11.2 KiB | 00m00s [ 72/155] efi-srpm-macros-0:5-13.fc42.n 100% | 21.9 MiB/s | 22.5 KiB | 00m00s [ 73/155] dwz-0:0.15-8.fc42.aarch64 100% | 67.0 MiB/s | 137.3 KiB | 00m00s [ 74/155] filesystem-srpm-macros-0:3.18 100% | 11.7 MiB/s | 23.9 KiB | 00m00s [ 75/155] fonts-srpm-macros-1:2.0.5-17. 100% | 26.3 MiB/s | 27.0 KiB | 00m00s [ 76/155] forge-srpm-macros-0:0.4.0-1.f 100% | 19.3 MiB/s | 19.8 KiB | 00m00s [ 77/155] fpc-srpm-macros-0:1.3-13.fc41 100% | 0.0 B/s | 8.0 KiB | 00m00s [ 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libpkgconf-0:2.3.0-1.fc42.aar 100% | 37.5 MiB/s | 38.4 KiB | 00m00s [130/155] cracklib-0:2.9.11-6.fc41.aarc 100% | 90.4 MiB/s | 92.6 KiB | 00m00s [131/155] krb5-libs-0:1.21.3-3.fc42.aar 100% | 373.8 MiB/s | 765.5 KiB | 00m00s [132/155] libcom_err-0:1.47.1-6.fc42.aa 100% | 8.8 MiB/s | 26.9 KiB | 00m00s [133/155] libtasn1-0:4.19.0-9.fc41.aarc 100% | 35.6 MiB/s | 73.0 KiB | 00m00s [134/155] keyutils-libs-0:1.6.3-4.fc41. 100% | 31.1 MiB/s | 31.9 KiB | 00m00s [135/155] libverto-0:0.3.2-9.fc41.aarch 100% | 20.5 MiB/s | 20.9 KiB | 00m00s [136/155] libgcc-0:15.0.0-0.2.fc42.aarc 100% | 794.8 KiB/s | 89.8 KiB | 00m00s [137/155] fedora-release-0:42-0.11.noar 100% | 0.0 B/s | 13.0 KiB | 00m00s [138/155] gdb-minimal-0:15.2-4.fc42.aar 100% | 243.4 MiB/s | 3.9 MiB | 00m00s [139/155] xxhash-libs-0:0.8.2-4.fc42.aa 100% | 33.8 MiB/s | 34.6 KiB | 00m00s [140/155] fedora-release-identity-basic 100% | 0.0 B/s | 13.8 KiB | 00m00s [141/155] libgomp-0:15.0.0-0.2.fc42.aar 100% | 2.4 MiB/s | 322.1 KiB | 00m00s [142/155] libcurl-0:8.11.1-2.fc42.aarch 100% | 171.5 MiB/s | 351.2 KiB | 00m00s [143/155] libbrotli-0:1.1.0-5.fc41.aarc 100% | 169.0 MiB/s | 346.2 KiB | 00m00s [144/155] libidn2-0:2.3.7-2.fc41.aarch6 100% | 116.0 MiB/s | 118.8 KiB | 00m00s [145/155] libnghttp2-0:1.64.0-1.fc42.aa 100% | 37.5 MiB/s | 76.8 KiB | 00m00s [146/155] libpsl-0:0.21.5-4.fc41.aarch6 100% | 62.9 MiB/s | 64.4 KiB | 00m00s [147/155] libssh-0:0.11.1-1.fc42.aarch6 100% | 113.8 MiB/s | 233.0 KiB | 00m00s [148/155] openldap-0:2.6.8-6.fc42.aarch 100% | 77.8 MiB/s | 239.0 KiB | 00m00s [149/155] libunistring-0:1.1-8.fc41.aar 100% | 263.6 MiB/s | 539.8 KiB | 00m00s [150/155] publicsuffix-list-dafsa-0:202 100% | 28.5 MiB/s | 58.3 KiB | 00m00s [151/155] libssh-config-0:0.11.1-1.fc42 100% | 0.0 B/s | 9.4 KiB | 00m00s [152/155] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 254.0 MiB/s | 780.2 KiB | 00m00s [153/155] libevent-0:2.1.12-14.fc41.aar 100% | 62.1 MiB/s | 254.6 KiB | 00m00s [154/155] libtool-ltdl-0:2.5.4-1.fc42.a 100% | 16.7 MiB/s | 34.3 KiB | 00m00s [155/155] libstdc++-0:15.0.0-0.2.fc42.a 100% | 4.4 MiB/s | 760.1 KiB | 00m00s -------------------------------------------------------------------------------- [155/155] Total 100% | 83.2 MiB/s | 51.1 MiB | 00m01s Running transaction Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing OpenPGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. [ 1/157] Verify package files 100% | 738.0 B/s | 155.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-29.fc42.aarch64 >>> Finished pre-transaction scriptlet: filesystem-0:3.18-29.fc42.aarch64 >>> [RPM] /var/lib/mock/fedora-rawhide-aarch64-1734536648.812070/root/var/cache/ [ 2/157] Prepare transaction 100% | 2.5 KiB/s | 155.0 B | 00m00s [ 3/157] Installing libgcc-0:15.0.0-0. 100% | 107.7 MiB/s | 220.5 KiB | 00m00s [ 4/157] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/157] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 6/157] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s [ 7/157] Installing fedora-repos-rawhi 100% | 2.4 MiB/s | 2.4 KiB | 00m00s [ 8/157] Installing fedora-gpg-keys-0: 100% | 28.0 MiB/s | 172.2 KiB | 00m00s [ 9/157] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/157] Installing fedora-release-com 100% | 23.6 MiB/s | 24.1 KiB | 00m00s [ 11/157] Installing 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368.7 MiB/s | 18.4 MiB | 00m00s [ 24/157] Installing zlib-ng-compat-0:2 100% | 131.5 MiB/s | 134.6 KiB | 00m00s [ 25/157] Installing bzip2-libs-0:1.0.8 100% | 197.1 MiB/s | 201.9 KiB | 00m00s [ 26/157] Installing xz-libs-1:5.6.3-2. 100% | 261.2 MiB/s | 267.5 KiB | 00m00s [ 27/157] Installing readline-0:8.2-11. 100% | 245.9 MiB/s | 755.5 KiB | 00m00s [ 28/157] Installing popt-0:1.19-7.fc41 100% | 91.0 MiB/s | 279.5 KiB | 00m00s [ 29/157] Installing libuuid-0:2.40.2-8 100% | 194.0 MiB/s | 198.6 KiB | 00m00s [ 30/157] Installing libblkid-0:2.40.2- 100% | 204.9 MiB/s | 419.7 KiB | 00m00s [ 31/157] Installing gmp-1:6.3.0-2.fc41 100% | 235.8 MiB/s | 724.2 KiB | 00m00s [ 32/157] Installing libattr-0:2.5.2-4. 100% | 192.9 MiB/s | 197.5 KiB | 00m00s [ 33/157] Installing libacl-0:2.3.2-2.f 100% | 192.3 MiB/s | 196.9 KiB | 00m00s [ 34/157] Installing libxcrypt-0:4.4.36 100% | 133.9 MiB/s | 274.2 KiB | 00m00s [ 35/157] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.3 KiB | 00m00s [ 36/157] 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Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.3-1.fc42.aarch64 alternatives-1.30-1.fc41.aarch64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.aarch64 authselect-1.5.0-8.fc42.aarch64 authselect-libs-1.5.0-8.fc42.aarch64 basesystem-11-21.fc41.noarch bash-5.2.37-1.fc42.aarch64 binutils-2.43.50-9.fc42.aarch64 build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch bzip2-1.0.8-19.fc41.aarch64 bzip2-libs-1.0.8-19.fc41.aarch64 ca-certificates-2024.2.69_v8.0.401-3.fc42.noarch coreutils-9.5-11.fc42.aarch64 coreutils-common-9.5-11.fc42.aarch64 cpio-2.15-2.fc41.aarch64 cracklib-2.9.11-6.fc41.aarch64 crypto-policies-20241128-1.gitbb7b0b0.fc42.noarch curl-8.11.1-2.fc42.aarch64 cyrus-sasl-lib-2.1.28-27.fc41.aarch64 debugedit-5.1-2.fc42.aarch64 diffutils-3.10-8.fc41.aarch64 dwz-0.15-8.fc42.aarch64 ed-1.20.2-2.fc41.aarch64 efi-srpm-macros-5-13.fc42.noarch elfutils-0.192-7.fc42.aarch64 elfutils-debuginfod-client-0.192-7.fc42.aarch64 elfutils-default-yama-scope-0.192-7.fc42.noarch elfutils-libelf-0.192-7.fc42.aarch64 elfutils-libs-0.192-7.fc42.aarch64 fedora-gpg-keys-42-0.3.noarch fedora-release-42-0.11.noarch fedora-release-common-42-0.11.noarch fedora-release-identity-basic-42-0.11.noarch fedora-repos-42-0.3.noarch fedora-repos-rawhide-42-0.3.noarch file-5.45-8.fc42.aarch64 file-libs-5.45-8.fc42.aarch64 filesystem-3.18-29.fc42.aarch64 filesystem-srpm-macros-3.18-29.fc42.noarch findutils-4.10.0-4.fc41.aarch64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.aarch64 gdb-minimal-15.2-4.fc42.aarch64 gdbm-1.23-7.fc41.aarch64 gdbm-libs-1.23-7.fc41.aarch64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-24.fc42.aarch64 glibc-common-2.40.9000-24.fc42.aarch64 glibc-gconv-extra-2.40.9000-24.fc42.aarch64 glibc-minimal-langpack-2.40.9000-24.fc42.aarch64 gmp-6.3.0-2.fc41.aarch64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-5.fc42.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.aarch64 gzip-1.13-2.fc41.aarch64 info-7.1.1-2.fc42.aarch64 jansson-2.14-1.fc42.aarch64 json-c-0.18-1.fc42.aarch64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.aarch64 krb5-libs-1.21.3-3.fc42.aarch64 libacl-2.3.2-2.fc41.aarch64 libarchive-3.7.7-1.fc42.aarch64 libattr-2.5.2-4.fc41.aarch64 libblkid-2.40.2-8.fc42.aarch64 libbrotli-1.1.0-5.fc41.aarch64 libcap-2.71-1.fc42.aarch64 libcap-ng-0.8.5-3.fc41.aarch64 libcom_err-1.47.1-6.fc42.aarch64 libcurl-8.11.1-2.fc42.aarch64 libeconf-0.7.5-1.fc42.aarch64 libevent-2.1.12-14.fc41.aarch64 libfdisk-2.40.2-8.fc42.aarch64 libffi-3.4.6-3.fc42.aarch64 libgcc-15.0.0-0.2.fc42.aarch64 libgomp-15.0.0-0.2.fc42.aarch64 libidn2-2.3.7-2.fc41.aarch64 libmount-2.40.2-8.fc42.aarch64 libnghttp2-1.64.0-1.fc42.aarch64 libnsl2-2.0.1-2.fc41.aarch64 libpkgconf-2.3.0-1.fc42.aarch64 libpsl-0.21.5-4.fc41.aarch64 libpwquality-1.4.5-11.fc41.aarch64 libselinux-3.8-0.rc1.2.fc42.aarch64 libsemanage-3.8-0.rc1.1.fc42.aarch64 libsepol-3.8-0.rc1.1.fc42.aarch64 libsmartcols-2.40.2-8.fc42.aarch64 libssh-0.11.1-1.fc42.aarch64 libssh-config-0.11.1-1.fc42.noarch libstdc++-15.0.0-0.2.fc42.aarch64 libtasn1-4.19.0-9.fc41.aarch64 libtirpc-1.3.6-1.fc42.aarch64 libtool-ltdl-2.5.4-1.fc42.aarch64 libunistring-1.1-8.fc41.aarch64 libuuid-2.40.2-8.fc42.aarch64 libverto-0.3.2-9.fc41.aarch64 libxcrypt-4.4.36-11.fc42.aarch64 libxml2-2.12.8-2.fc41.aarch64 libzstd-1.5.6-2.fc41.aarch64 lua-libs-5.4.7-1.fc42.aarch64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.aarch64 mpfr-4.2.1-5.fc41.aarch64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.aarch64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-6.fc42.aarch64 openssl-libs-3.2.2-8.fc42.aarch64 p11-kit-0.25.5-4.fc42.aarch64 p11-kit-trust-0.25.5-4.fc42.aarch64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.7.0-3.fc42.aarch64 pam-libs-1.7.0-3.fc42.aarch64 patch-2.7.6-25.fc41.aarch64 pcre2-10.44-1.fc41.1.aarch64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.aarch64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.aarch64 popt-1.19-7.fc41.aarch64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.3-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.1-4.fc42.noarch readline-8.2-11.fc42.aarch64 redhat-rpm-config-300-1.no_annobin.0.fc42.noarch rpm-4.20.0-1.fc42.aarch64 rpm-build-4.20.0-1.fc42.aarch64 rpm-build-libs-4.20.0-1.fc42.aarch64 rpm-libs-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.aarch64 setup-2.15.0-5.fc41.noarch shadow-utils-4.17.0~rc1-1.fc42.aarch64 sqlite-libs-3.47.2-1.fc42.aarch64 systemd-libs-257-1.fc42.aarch64 tar-1.35-4.fc41.aarch64 unzip-6.0-65.fc42.aarch64 util-linux-2.40.2-8.fc42.aarch64 util-linux-core-2.40.2-8.fc42.aarch64 which-2.21-42.fc41.aarch64 xxhash-libs-0.8.2-4.fc42.aarch64 xz-5.6.3-2.fc42.aarch64 xz-libs-5.6.3-2.fc42.aarch64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-42.fc42.aarch64 zlib-ng-compat-2.2.2-1.fc42.aarch64 zstd-1.5.6-2.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6' not found setting SOURCE_DATE_EPOCH=1724198400 Wrote: /builddir/build/SRPMS/COPASI-4.44.295-1.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1734536648.812070/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-ftaqd0ix/COPASI/COPASI.spec) Config(child) 0 minutes 19 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/COPASI-4.44.295-1.fc42.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734536648.812070/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734536648.812070/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1734536648.812070/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 dnf5-5.2.8.1-2.fc42.aarch64 dnf5-plugins-5.2.8.1-2.fc42.aarch64 Finish: chroot init Start: build phase for COPASI-4.44.295-1.fc42.src.rpm Start: build setup for COPASI-4.44.295-1.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6' not found setting SOURCE_DATE_EPOCH=1724198400 Wrote: /builddir/build/SRPMS/COPASI-4.44.295-1.fc42.src.rpm Updating and loading repositories: fedora 100% | 45.0 KiB/s | 11.7 KiB | 00m00s Additional repo https_fedorapeople_org 100% | 21.5 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 117.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "pkgconf-pkg-config-2.3.0-1.fc42.aarch64" is already installed. Package Arch Version Repository Size Installing: ImageMagick aarch64 1:7.1.1.41-1.fc42 fedora 140.4 KiB bison aarch64 3.8.2-9.fc41 fedora 3.6 MiB bzip2-devel aarch64 1.0.8-19.fc41 fedora 309.8 KiB cmake aarch64 3.31.2-1.fc42 fedora 28.8 MiB cppunit-devel aarch64 1.15.1-23.fc41 fedora 211.4 KiB crossguid2-devel aarch64 0.2.2-19.20190529gitca1bf4b.fc41 fedora 13.3 KiB desktop-file-utils aarch64 0.27-2.fc41 fedora 638.4 KiB expat-devel aarch64 2.6.4-1.fc42 fedora 202.8 KiB f2c aarch64 20210928-9.fc41 fedora 839.8 KiB flex aarch64 2.6.4-18.fc41 fedora 881.3 KiB flexiblas-devel aarch64 3.4.4-3.fc41 fedora 5.1 MiB freeglut-devel aarch64 3.6.0-2.fc41 fedora 2.3 MiB gcc aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 97.8 MiB gcc-c++ aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 38.5 MiB google-cpu_features-devel aarch64 0.9.0-2.fc41 fedora 32.5 KiB libCombine-devel aarch64 0.2.20-8.fc41 fedora 352.9 KiB libappstream-glib aarch64 0.8.3-2.fc41 fedora 1.7 MiB libcurl-devel aarch64 8.11.1-2.fc42 fedora 1.3 MiB libmml-qt5-devel aarch64 2.4-21.20210516git7ad58fac.fc41 fedora 4.5 KiB libnuml-devel aarch64 1.1.4-18.fc41 fedora 307.6 KiB libnuml-static aarch64 1.1.4-18.fc41 fedora 649.6 KiB libsbml-devel aarch64 5.20.4-1.fc42 fedora 37.2 MiB libsbw-devel aarch64 2.12.2-16.fc41 fedora 436.6 KiB libsedml-devel aarch64 2:2.0.32-12.fc41 fedora 2.7 MiB libxslt-devel aarch64 1.1.42-2.fc41 fedora 957.2 KiB mesa-libGL-devel aarch64 24.3.1-1.fc42 fedora 80.9 KiB mesa-libGLU-devel aarch64 9.0.3-5.fc41 fedora 17.0 KiB minizip-ng-compat-devel aarch64 4.0.7-1.fc41 fedora 86.5 KiB python3-devel aarch64 3.13.1-2.fc42 fedora 1.8 MiB python3-setuptools noarch 74.1.3-4.fc42 fedora 8.4 MiB qcustomplot-qt5-devel aarch64 2.1.1-10.fc41 fedora 303.3 KiB qt5-qtbase-devel aarch64 5.15.15-3.fc42 fedora 19.2 MiB qt5-qtdatavis3d-devel aarch64 5.15.15-1.fc42 fedora 442.0 KiB qt5-qtwebkit-devel aarch64 5.212.0-0.89alpha4.fc42 fedora 201.6 KiB qwt-qt5-devel aarch64 6.2.0-8.fc41 fedora 666.0 KiB qwtplot3d-qt5-devel aarch64 1:0.3.0-9.20210828gitb265574.fc41 fedora 1.1 MiB swig aarch64 4.3.0-3.fc42 fedora 6.1 MiB zipper-devel aarch64 1.0.3-9.fc41 fedora 70.6 KiB Installing dependencies: ImageMagick-libs aarch64 1:7.1.1.41-1.fc42 fedora 14.1 MiB LibRaw aarch64 0.21.3-1.fc42 fedora 2.4 MiB abattis-cantarell-vf-fonts noarch 0.301-13.fc41 fedora 192.7 KiB adobe-mappings-cmap noarch 20231115-1.fc42 fedora 15.2 MiB adobe-mappings-cmap-deprecated noarch 20231115-1.fc42 fedora 582.1 KiB adobe-mappings-pdf noarch 20190401-8.fc41 fedora 4.4 MiB alsa-lib aarch64 1.2.13-3.fc42 fedora 1.5 MiB annobin-docs noarch 12.79-1.fc42 fedora 98.6 KiB annobin-plugin-gcc aarch64 12.79-1.fc42 fedora 997.2 KiB avahi-libs aarch64 0.8-30.fc42 fedora 614.5 KiB brotli aarch64 1.1.0-5.fc41 fedora 195.8 KiB brotli-devel aarch64 1.1.0-5.fc41 fedora 65.6 KiB cairo aarch64 1.18.2-2.fc42 fedora 1.8 MiB cairo-gobject aarch64 1.18.2-2.fc42 fedora 66.1 KiB cdparanoia-libs aarch64 10.2-45.fc41 fedora 393.8 KiB cmake-data noarch 3.31.2-1.fc42 fedora 8.5 MiB cmake-filesystem aarch64 3.31.2-1.fc42 fedora 0.0 B cmake-rpm-macros noarch 3.31.2-1.fc42 fedora 7.5 KiB cpp aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 35.3 MiB cppunit aarch64 1.15.1-23.fc41 fedora 660.6 KiB crossguid2 aarch64 0.2.2-19.20190529gitca1bf4b.fc41 fedora 203.5 KiB cups-filesystem noarch 1:2.4.11-8.fc42 fedora 0.0 B cups-libs aarch64 1:2.4.11-8.fc42 fedora 721.8 KiB dbus-libs aarch64 1:1.16.0-1.fc42 fedora 387.6 KiB default-fonts-core-sans noarch 4.2-2.fc42 fedora 11.9 KiB double-conversion aarch64 3.3.0-4.fc41 fedora 204.5 KiB duktape aarch64 2.7.0-8.fc41 fedora 928.3 KiB emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B expat aarch64 2.6.4-1.fc42 fedora 349.3 KiB f2c-libs aarch64 20210928-9.fc41 fedora 280.7 KiB fftw-libs-double aarch64 3.3.10-13.fc41 fedora 2.3 MiB flexiblas aarch64 3.4.4-3.fc41 fedora 48.5 KiB flexiblas-netlib aarch64 3.4.4-3.fc41 fedora 9.8 MiB flexiblas-netlib64 aarch64 3.4.4-3.fc41 fedora 9.7 MiB flexiblas-openblas-openmp aarch64 3.4.4-3.fc41 fedora 195.4 KiB flexiblas-openblas-openmp64 aarch64 3.4.4-3.fc41 fedora 195.5 KiB fontconfig aarch64 2.15.0-8.fc41 fedora 2.4 MiB fonts-filesystem noarch 1:2.0.5-17.fc41 fedora 0.0 B freeglut aarch64 3.6.0-2.fc41 fedora 523.5 KiB freetype aarch64 2.13.3-1.fc42 fedora 943.0 KiB fribidi aarch64 1.0.16-1.fc42 fedora 502.6 KiB gcc-plugin-annobin aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 67.5 KiB gdk-pixbuf2 aarch64 2.42.12-6.fc41 fedora 2.9 MiB giflib aarch64 5.2.2-2.fc41 fedora 260.3 KiB gl2ps aarch64 1.4.2-11.fc41 fedora 223.2 KiB glib2 aarch64 2.83.0-3.fc42 fedora 15.3 MiB glibc-devel aarch64 2.40.9000-24.fc42 fedora 2.2 MiB glx-utils aarch64 9.0.0-8.fc41 fedora 847.1 KiB gnutls aarch64 3.8.8-1.fc42 fedora 3.4 MiB google-cpu_features aarch64 0.9.0-2.fc41 fedora 420.7 KiB google-droid-sans-fonts noarch 20200215-21.fc41 fedora 6.3 MiB google-noto-fonts-common noarch 20240901-1.fc42 fedora 17.5 KiB google-noto-sans-vf-fonts noarch 20240901-1.fc42 fedora 1.2 MiB graphene aarch64 1.10.6-9.fc41 fedora 242.7 KiB graphite2 aarch64 1.3.14-16.fc41 fedora 495.9 KiB graphviz-libs aarch64 12.2.1-1.fc42 fedora 1.3 MiB groff-base aarch64 1.23.0-7.fc41 fedora 5.2 MiB gstreamer1 aarch64 1.24.10-1.fc42 fedora 5.7 MiB gstreamer1-plugins-base aarch64 1.24.10-1.fc42 fedora 8.1 MiB harfbuzz aarch64 10.1.0-2.fc42 fedora 2.5 MiB highway aarch64 1.2.0-3.fc41 fedora 4.8 MiB hwdata noarch 0.390-1.fc42 fedora 9.3 MiB hyphen aarch64 2.8.8-25.fc41 fedora 219.6 KiB imath aarch64 3.1.12-1.fc42 fedora 515.9 KiB iso-codes noarch 4.17.0-1.fc42 fedora 20.3 MiB jasper-libs aarch64 4.2.3-2.fc41 fedora 460.9 KiB jbig2dec-libs aarch64 0.20-5.fc41 fedora 301.1 KiB jbigkit-libs aarch64 2.1-30.fc41 fedora 437.7 KiB json-glib aarch64 1.10.6-1.fc42 fedora 606.6 KiB jsoncpp aarch64 1.9.5-8.fc41 fedora 335.7 KiB kernel-headers aarch64 6.13.0-0.rc3.29.fc42 fedora 6.4 MiB keyutils-libs-devel aarch64 1.6.3-4.fc41 fedora 48.2 KiB krb5-devel aarch64 1.21.3-3.fc42 fedora 705.9 KiB lcms2 aarch64 2.16-4.fc41 fedora 484.9 KiB libCombine aarch64 0.2.20-8.fc41 fedora 525.6 KiB libICE aarch64 1.1.2-1.fc42 fedora 220.0 KiB libSM aarch64 1.2.5-1.fc42 fedora 127.5 KiB libX11 aarch64 1.8.10-2.fc42 fedora 1.3 MiB libX11-common noarch 1.8.10-2.fc42 fedora 1.1 MiB libX11-devel aarch64 1.8.10-2.fc42 fedora 1.0 MiB libX11-xcb aarch64 1.8.10-2.fc42 fedora 195.1 KiB libXau aarch64 1.0.12-1.fc42 fedora 119.8 KiB libXau-devel aarch64 1.0.12-1.fc42 fedora 7.5 KiB libXext aarch64 1.3.6-2.fc41 fedora 210.0 KiB libXft aarch64 2.3.8-7.fc41 fedora 256.5 KiB libXi aarch64 1.8.2-1.fc42 fedora 200.7 KiB libXrender aarch64 0.9.12-1.fc42 fedora 68.7 KiB libXt aarch64 1.3.1-1.fc42 fedora 480.5 KiB libXv aarch64 1.0.13-1.fc42 fedora 68.6 KiB libXxf86vm aarch64 1.1.6-1.fc42 fedora 68.2 KiB libaom aarch64 3.9.0-3.fc41 fedora 3.7 MiB libasan aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 1.5 MiB libatomic aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 66.1 KiB libb2 aarch64 0.98.1-12.fc41 fedora 202.2 KiB libcom_err-devel aarch64 1.47.1-6.fc42 fedora 16.7 KiB libdatrie aarch64 0.2.13-10.fc41 fedora 222.0 KiB libdav1d aarch64 1.5.0-1.fc42 fedora 921.0 KiB libdeflate aarch64 1.23-1.fc42 fedora 161.2 KiB libdrm aarch64 2.4.124-1.fc42 fedora 744.4 KiB libdrm-devel aarch64 2.4.124-1.fc42 fedora 755.9 KiB libedit aarch64 3.1-53.20240808cvs.fc41 fedora 344.2 KiB libevdev aarch64 1.13.3-1.fc42 fedora 198.2 KiB libgfortran aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 1.7 MiB libglvnd aarch64 1:1.7.0-5.fc41 fedora 1.5 MiB libglvnd-core-devel aarch64 1:1.7.0-5.fc41 fedora 40.3 KiB libglvnd-devel aarch64 1:1.7.0-5.fc41 fedora 2.1 MiB libglvnd-egl aarch64 1:1.7.0-5.fc41 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libxcb-devel aarch64 1.17.0-3.fc42 fedora 2.7 MiB libxcrypt-devel aarch64 4.4.36-11.fc42 fedora 30.5 KiB libxkbcommon aarch64 1.7.0-4.fc41 fedora 596.6 KiB libxkbcommon-x11 aarch64 1.7.0-4.fc41 fedora 195.7 KiB libxml2-devel aarch64 2.12.8-2.fc41 fedora 3.4 MiB libxshmfence aarch64 1.3.2-5.fc42 fedora 68.8 KiB libxslt aarch64 1.1.42-2.fc41 fedora 867.2 KiB libzip aarch64 1.11.2-1.fc42 fedora 136.1 KiB llvm-libs aarch64 19.1.5-1.fc42 fedora 113.7 MiB lm_sensors-libs aarch64 3.6.0-20.fc41 fedora 221.9 KiB m4 aarch64 1.4.19-10.fc41 fedora 668.7 KiB make aarch64 1:4.4.1-9.fc42 fedora 1.8 MiB mesa-dri-drivers aarch64 24.3.1-1.fc42 fedora 102.4 MiB mesa-filesystem aarch64 24.3.1-1.fc42 fedora 3.6 KiB mesa-libEGL aarch64 24.3.1-1.fc42 fedora 387.7 KiB mesa-libEGL-devel aarch64 24.3.1-1.fc42 fedora 21.5 KiB mesa-libGL aarch64 24.3.1-1.fc42 fedora 579.0 KiB mesa-libGLU aarch64 9.0.3-5.fc41 fedora 393.6 KiB mesa-libgbm aarch64 24.3.1-1.fc42 fedora 132.7 KiB mesa-libglapi aarch64 24.3.1-1.fc42 fedora 322.3 KiB minizip-ng-compat aarch64 4.0.7-1.fc41 fedora 262.7 KiB mpdecimal aarch64 2.5.1-16.fc41 fedora 328.9 KiB mtdev aarch64 1.1.6-9.fc41 fedora 197.4 KiB ncurses aarch64 6.5-2.20240629.fc41 fedora 1.7 MiB nettle aarch64 3.10-3.fc41 fedora 956.7 KiB noopenh264 aarch64 0.1.0~openh264_2.4.1-2.fc41 fedora 223.0 KiB openblas aarch64 0.3.28-2.fc42 fedora 106.6 KiB openblas-openmp aarch64 0.3.28-2.fc42 fedora 20.6 MiB openblas-openmp64 aarch64 0.3.28-2.fc42 fedora 20.4 MiB openexr-libs aarch64 3.2.4-3.fc41 fedora 6.9 MiB openjpeg aarch64 2.5.2-4.fc42 fedora 537.7 KiB openssl-devel aarch64 1:3.2.2-8.fc42 fedora 4.3 MiB opus aarch64 1.5.2-1.fc42 fedora 519.9 KiB orc aarch64 0.4.39-1.fc41 fedora 1.2 MiB pango aarch64 1.54.0-2.fc41 fedora 1.9 MiB pcre2-devel aarch64 10.44-1.fc41.1 fedora 2.0 MiB pcre2-utf16 aarch64 10.44-1.fc41.1 fedora 645.9 KiB pcre2-utf32 aarch64 10.44-1.fc41.1 fedora 645.8 KiB perl-AutoLoader noarch 5.74-512.fc42 fedora 20.5 KiB perl-B aarch64 1.89-512.fc42 fedora 606.1 KiB perl-Carp noarch 1.54-511.fc41 fedora 46.6 KiB perl-Class-Struct noarch 0.68-512.fc42 fedora 25.4 KiB perl-Data-Dumper aarch64 2.189-512.fc41 fedora 263.8 KiB perl-Digest noarch 1.20-511.fc41 fedora 35.3 KiB perl-Digest-MD5 aarch64 2.59-5.fc41 fedora 231.9 KiB perl-DynaLoader aarch64 1.56-512.fc42 fedora 32.1 KiB perl-Encode aarch64 4:3.21-511.fc41 fedora 5.9 MiB perl-English noarch 1.11-512.fc42 fedora 6.2 KiB perl-Errno aarch64 1.38-512.fc42 fedora 8.4 KiB perl-Exporter noarch 5.78-511.fc41 fedora 54.3 KiB perl-Fcntl aarch64 1.18-512.fc42 fedora 221.1 KiB perl-File-Basename noarch 2.86-512.fc42 fedora 14.0 KiB perl-File-Find noarch 1.44-512.fc42 fedora 41.9 KiB perl-File-Path noarch 2.18-511.fc41 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.100-511.fc41 fedora 162.3 KiB perl-File-stat noarch 1.14-512.fc42 fedora 12.5 KiB perl-FileHandle noarch 2.05-512.fc42 fedora 9.3 KiB perl-Getopt-Long noarch 1:2.58-2.fc41 fedora 144.5 KiB perl-Getopt-Std noarch 1.14-512.fc42 fedora 11.2 KiB perl-HTTP-Tiny noarch 0.090-1.fc42 fedora 154.4 KiB perl-IO aarch64 1.55-512.fc42 fedora 319.2 KiB perl-IO-Socket-IP noarch 0.43-1.fc42 fedora 100.3 KiB perl-IO-Socket-SSL noarch 2.089-1.fc42 fedora 703.3 KiB perl-IPC-Open3 noarch 1.22-512.fc42 fedora 22.5 KiB perl-MIME-Base32 noarch 1.303-21.fc41 fedora 30.7 KiB perl-MIME-Base64 aarch64 3.16-511.fc41 fedora 222.2 KiB perl-Net-SSLeay aarch64 1.94-7.fc41 fedora 1.4 MiB perl-POSIX aarch64 2.20-512.fc42 fedora 327.3 KiB perl-PathTools aarch64 3.91-511.fc41 fedora 352.1 KiB perl-Pod-Escapes noarch 1:1.07-511.fc41 fedora 24.9 KiB perl-Pod-Perldoc noarch 3.28.01-512.fc41 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.45-511.fc41 fedora 560.9 KiB perl-Pod-Usage noarch 4:2.03-511.fc41 fedora 84.8 KiB perl-Scalar-List-Utils aarch64 5:1.68-1.fc42 fedora 281.0 KiB perl-SelectSaver noarch 1.02-512.fc42 fedora 2.2 KiB perl-Socket aarch64 4:2.038-511.fc41 fedora 272.1 KiB perl-Storable aarch64 1:3.32-511.fc41 fedora 372.5 KiB perl-Symbol noarch 1.09-512.fc42 fedora 6.8 KiB perl-Term-ANSIColor noarch 5.01-512.fc41 fedora 97.5 KiB perl-Term-Cap noarch 1.18-511.fc41 fedora 29.3 KiB perl-Text-ParseWords noarch 3.31-511.fc41 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 2024.001-511.fc41 fedora 22.6 KiB perl-Time-Local noarch 2:1.350-511.fc41 fedora 69.0 KiB perl-URI noarch 5.31-1.fc42 fedora 257.0 KiB perl-base noarch 2.27-512.fc42 fedora 12.5 KiB perl-constant noarch 1.33-512.fc41 fedora 26.2 KiB perl-if noarch 0.61.000-512.fc42 fedora 5.8 KiB perl-interpreter aarch64 4:5.40.0-512.fc42 fedora 302.3 KiB perl-libnet noarch 3.15-512.fc41 fedora 289.4 KiB perl-libs aarch64 4:5.40.0-512.fc42 fedora 10.9 MiB perl-locale noarch 1.12-512.fc42 fedora 6.5 KiB perl-mro aarch64 1.29-512.fc42 fedora 209.7 KiB perl-overload noarch 1.37-512.fc42 fedora 71.5 KiB perl-overloading noarch 0.02-512.fc42 fedora 4.8 KiB perl-parent noarch 1:0.244-1.fc42 fedora 10.3 KiB perl-podlators noarch 1:6.0.2-2.fc41 fedora 317.5 KiB perl-vars noarch 1.05-512.fc42 fedora 3.9 KiB pixman aarch64 0.44.2-1.fc42 fedora 644.4 KiB publicsuffix-list noarch 20240107-4.fc41 fedora 318.0 KiB pyproject-rpm-macros noarch 1.16.3-1.fc42 fedora 113.7 KiB python-pip-wheel noarch 24.3.1-1.fc42 fedora 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB python3 aarch64 3.13.1-2.fc42 fedora 82.5 KiB python3-libs aarch64 3.13.1-2.fc42 fedora 41.7 MiB python3-packaging noarch 24.2-2.fc42 fedora 555.7 KiB python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB qcustomplot-qt5 aarch64 2.1.1-10.fc41 fedora 1.5 MiB qt-settings noarch 41.2-1.fc42 fedora 1.1 KiB qt5-filesystem aarch64 5.15.15-1.fc42 fedora 0.0 B qt5-qtbase aarch64 5.15.15-3.fc42 fedora 10.3 MiB qt5-qtbase-common noarch 5.15.15-3.fc42 fedora 78.0 B qt5-qtbase-gui aarch64 5.15.15-3.fc42 fedora 20.7 MiB qt5-qtdatavis3d aarch64 5.15.15-1.fc42 fedora 2.2 MiB qt5-qtdeclarative aarch64 5.15.15-1.fc42 fedora 19.3 MiB qt5-qtdeclarative-devel aarch64 5.15.15-1.fc42 fedora 10.6 MiB qt5-qtlocation aarch64 5.15.15-1.fc42 fedora 11.9 MiB qt5-qtsensors aarch64 5.15.15-1.fc42 fedora 2.1 MiB qt5-qtsvg aarch64 5.15.15-1.fc42 fedora 1.0 MiB qt5-qtsvg-devel aarch64 5.15.15-1.fc42 fedora 83.5 KiB qt5-qtwebchannel aarch64 5.15.15-1.fc42 fedora 579.2 KiB qt5-qtwebkit aarch64 5.212.0-0.89alpha4.fc42 fedora 42.1 MiB qt5-rpm-macros noarch 5.15.15-1.fc42 fedora 1.6 KiB qwt-qt5 aarch64 6.2.0-8.fc41 fedora 1.8 MiB qwtplot3d-qt5 aarch64 1:0.3.0-9.20210828gitb265574.fc41 fedora 328.7 KiB rav1e-libs aarch64 0.7.1-4.fc42 fedora 2.1 MiB rhash aarch64 1.4.5-1.fc42 fedora 587.1 KiB rsvg-pixbuf-loader aarch64 2.59.2-1.fc42 fedora 336.6 KiB shared-mime-info aarch64 2.3-6.fc41 fedora 5.3 MiB spirv-tools-libs aarch64 2024.3-4.fc42 fedora 5.3 MiB svt-av1-libs aarch64 2.1.0-2.fc41 fedora 4.2 MiB tzdata noarch 2024b-1.fc42 fedora 1.6 MiB urw-base35-bookman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-c059-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 20200910-23.fc41 fedora 84.3 KiB urw-base35-fonts noarch 20200910-23.fc41 fedora 5.3 KiB urw-base35-fonts-common noarch 20200910-23.fc41 fedora 37.4 KiB urw-base35-gothic-fonts noarch 20200910-23.fc41 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 20200910-23.fc41 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 20200910-23.fc41 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 20200910-23.fc41 fedora 2.4 MiB urw-base35-p052-fonts noarch 20200910-23.fc41 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 20200910-23.fc41 fedora 64.9 KiB urw-base35-z003-fonts noarch 20200910-23.fc41 fedora 390.8 KiB vim-filesystem noarch 2:9.1.919-1.fc42 fedora 40.0 B vulkan-headers noarch 1.3.296.0-1.fc42 fedora 26.9 MiB vulkan-loader aarch64 1.3.296.0-1.fc42 fedora 676.1 KiB vulkan-loader-devel aarch64 1.3.296.0-1.fc42 fedora 7.8 KiB woff2 aarch64 1.0.2-20.fc41 fedora 589.4 KiB xcb-util aarch64 0.4.1-6.fc41 fedora 198.5 KiB xcb-util-image aarch64 0.4.1-6.fc41 fedora 198.3 KiB xcb-util-keysyms aarch64 0.4.1-6.fc41 fedora 196.8 KiB xcb-util-renderutil aarch64 0.3.10-6.fc41 fedora 200.5 KiB xcb-util-wm aarch64 0.4.2-6.fc41 fedora 393.6 KiB xkeyboard-config noarch 2.43-1.fc42 fedora 6.6 MiB xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB xorg-x11-proto-devel noarch 2024.1-3.fc41 fedora 1.7 MiB xz-devel aarch64 1:5.6.3-2.fc42 fedora 255.6 KiB zipper aarch64 1.0.3-9.fc41 fedora 271.2 KiB zlib-ng-compat-devel aarch64 2.2.2-1.fc42 fedora 106.8 KiB Transaction Summary: Installing: 362 packages Total size of inbound packages is 300 MiB. Need to download 300 MiB. After this operation, 1 GiB extra will be used (install 1 GiB, remove 0 B). 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KiB | 00m00s [358/362] python3-rpm-macros-0:3.13-3.f 100% | 0.0 B/s | 12.4 KiB | 00m00s [359/362] cmake-rpm-macros-0:3.31.2-1.f 100% | 16.5 MiB/s | 16.9 KiB | 00m00s [360/362] libgfortran-0:15.0.0-0.2.fc42 100% | 22.6 MiB/s | 440.5 KiB | 00m00s [361/362] python3-packaging-0:24.2-2.fc 100% | 75.1 MiB/s | 153.8 KiB | 00m00s [362/362] gcc-plugin-annobin-0:15.0.0-0 100% | 1.4 MiB/s | 30.8 KiB | 00m00s -------------------------------------------------------------------------------- [362/362] Total 100% | 199.0 MiB/s | 300.2 MiB | 00m02s Running transaction [ 1/364] Verify package files 100% | 341.0 B/s | 362.0 B | 00m01s [ 2/364] Prepare transaction 100% | 1.4 KiB/s | 362.0 B | 00m00s [ 3/364] Installing cmake-filesystem-0 100% | 3.7 MiB/s | 7.6 KiB | 00m00s [ 4/364] Installing libjpeg-turbo-0:3. 100% | 259.9 MiB/s | 798.5 KiB | 00m00s [ 5/364] Installing libpng-2:1.6.44-1. 100% | 327.3 MiB/s | 335.2 KiB | 00m00s [ 6/364] Installing expat-0:2.6.4-1.fc 100% | 171.6 MiB/s | 351.4 KiB | 00m00s 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199.4 KiB | 00m00s [ 20/364] Installing openjpeg-0:2.5.2-4 100% | 263.5 MiB/s | 539.7 KiB | 00m00s [ 21/364] Installing lcms2-0:2.16-4.fc4 100% | 237.6 MiB/s | 486.5 KiB | 00m00s [ 22/364] Installing libmpc-0:1.3.1-6.f 100% | 275.7 MiB/s | 282.3 KiB | 00m00s [ 23/364] Installing python3-rpm-macros 100% | 0.0 B/s | 6.7 KiB | 00m00s [ 24/364] Installing mesa-libGLU-0:9.0. 100% | 192.6 MiB/s | 394.4 KiB | 00m00s [ 25/364] Installing openblas-0:0.3.28- 100% | 105.8 MiB/s | 108.3 KiB | 00m00s [ 26/364] Installing libevdev-0:1.13.3- 100% | 194.6 MiB/s | 199.3 KiB | 00m00s [ 27/364] Installing libwayland-server- 100% | 195.2 MiB/s | 199.9 KiB | 00m00s [ 28/364] Installing libXau-0:1.0.12-1. 100% | 118.5 MiB/s | 121.3 KiB | 00m00s [ 29/364] Installing libxcb-0:1.17.0-3. 100% | 420.5 MiB/s | 5.0 MiB | 00m00s [ 30/364] Installing xorg-x11-proto-dev 100% | 178.3 MiB/s | 1.8 MiB | 00m00s [ 31/364] Installing fribidi-0:1.0.16-1 100% | 246.6 MiB/s | 505.1 KiB | 00m00s [ 32/364] Installing adobe-mappings-cma 100% | 281.3 MiB/s | 15.2 MiB | 00m00s [ 33/364] Installing xml-common-0:0.6.3 100% | 39.6 MiB/s | 81.1 KiB | 00m00s [ 34/364] Installing libicu74-0:74.2-1. 100% | 340.8 MiB/s | 35.1 MiB | 00m00s [ 35/364] Installing pcre2-utf16-0:10.4 100% | 315.8 MiB/s | 646.7 KiB | 00m00s [ 36/364] Installing dbus-libs-1:1.16.0 100% | 94.9 MiB/s | 388.7 KiB | 00m00s [ 37/364] Installing kernel-headers-0:6 100% | 155.5 MiB/s | 6.5 MiB | 00m00s [ 38/364] Installing libxcrypt-devel-0: 100% | 10.7 MiB/s | 32.9 KiB | 00m00s [ 39/364] Installing glibc-devel-0:2.40 100% | 120.6 MiB/s | 2.3 MiB | 00m00s [ 40/364] Installing jbigkit-libs-0:2.1 100% | 214.7 MiB/s | 439.7 KiB | 00m00s [ 41/364] Installing imath-0:3.1.12-1.f 100% | 252.9 MiB/s | 518.0 KiB | 00m00s [ 42/364] Installing zipper-0:1.0.3-9.f 100% | 133.2 MiB/s | 272.7 KiB | 00m00s [ 43/364] Installing minizip-ng-compat- 100% | 257.3 MiB/s | 263.5 KiB | 00m00s [ 44/364] Installing libsbml-0:5.20.4-1 100% | 399.7 MiB/s | 9.6 MiB | 00m00s [ 45/364] Installing libnuml-0:1.1.4-18 100% | 161.0 MiB/s | 329.8 KiB | 00m00s [ 46/364] Installing libxslt-0:1.1.42-2 100% | 283.3 MiB/s | 870.3 KiB | 00m00s [ 47/364] Installing emacs-filesystem-1 100% | 0.0 B/s | 544.0 B | 00m00s [ 48/364] Installing make-1:4.4.1-9.fc4 100% | 231.4 MiB/s | 1.9 MiB | 00m00s [ 49/364] Installing m4-0:1.4.19-10.fc4 100% | 164.8 MiB/s | 675.0 KiB | 00m00s [ 50/364] Installing libsedml-2:2.0.32- 100% | 367.9 MiB/s | 2.2 MiB | 00m00s [ 51/364] Installing libCombine-0:0.2.2 100% | 257.4 MiB/s | 527.1 KiB | 00m00s [ 52/364] Installing avahi-libs-0:0.8-3 100% | 150.7 MiB/s | 617.1 KiB | 00m00s [ 53/364] Installing iso-codes-0:4.17.0 100% | 240.9 MiB/s | 20.5 MiB | 00m00s [ 54/364] Installing adobe-mappings-cma 100% | 190.5 MiB/s | 585.2 KiB | 00m00s [ 55/364] Installing libXau-devel-0:1.0 100% | 1.5 MiB/s | 9.4 KiB | 00m00s [ 56/364] Installing libxcb-devel-0:1.1 100% | 50.3 MiB/s | 3.1 MiB | 00m00s [ 57/364] Installing xcb-util-keysyms-0 100% | 193.3 MiB/s | 197.9 KiB | 00m00s [ 58/364] Installing xcb-util-renderuti 100% | 197.2 MiB/s | 202.0 KiB | 00m00s [ 59/364] Installing xcb-util-wm-0:0.4. 100% | 193.2 MiB/s | 395.6 KiB | 00m00s [ 60/364] Installing xcb-util-0:0.4.1-6 100% | 195.2 MiB/s | 199.9 KiB | 00m00s [ 61/364] Installing xcb-util-image-0:0 100% | 195.0 MiB/s | 199.7 KiB | 00m00s [ 62/364] Installing openblas-openmp-0: 100% | 428.5 MiB/s | 20.6 MiB | 00m00s [ 63/364] Installing flexiblas-netlib-0 100% | 339.2 MiB/s | 9.8 MiB | 00m00s [ 64/364] Installing flexiblas-0:3.4.4- 100% | 48.5 MiB/s | 49.7 KiB | 00m00s [ 65/364] Installing flexiblas-openblas 100% | 191.7 MiB/s | 196.3 KiB | 00m00s [ 66/364] Installing openblas-openmp64- 100% | 425.9 MiB/s | 20.4 MiB | 00m00s [ 67/364] Installing flexiblas-netlib64 100% | 346.8 MiB/s | 9.7 MiB | 00m00s [ 68/364] Installing flexiblas-openblas 100% | 191.7 MiB/s | 196.3 KiB | 00m00s [ 69/364] Installing pyproject-rpm-macr 100% | 113.0 MiB/s | 115.7 KiB | 00m00s [ 70/364] Installing cpp-0:15.0.0-0.2.f 100% | 321.0 MiB/s | 35.3 MiB | 00m00s [ 71/364] Installing libwayland-cursor- 100% | 205.7 MiB/s | 210.6 KiB | 00m00s [ 72/364] Installing libtheora-1:1.1.1- 100% | 417.8 MiB/s | 855.6 KiB | 00m00s [ 73/364] Installing libvorbis-1:1.3.7- 100% | 401.2 MiB/s | 1.2 MiB | 00m00s [ 74/364] Installing urw-base35-bookman 100% | 105.0 MiB/s | 1.4 MiB | 00m00s [ 75/364] Installing urw-base35-c059-fo 100% | 126.8 MiB/s | 1.4 MiB | 00m00s [ 76/364] Installing urw-base35-d050000 100% | 10.4 MiB/s | 85.4 KiB | 00m00s [ 77/364] Installing urw-base35-gothic- 100% | 116.3 MiB/s | 1.2 MiB | 00m00s [ 78/364] Installing urw-base35-nimbus- 100% | 105.2 MiB/s | 1.1 MiB | 00m00s [ 79/364] Installing urw-base35-nimbus- 100% | 124.2 MiB/s | 1.4 MiB | 00m00s [ 80/364] Installing urw-base35-nimbus- 100% | 171.0 MiB/s | 2.4 MiB | 00m00s [ 81/364] Installing urw-base35-p052-fo 100% | 135.2 MiB/s | 1.5 MiB | 00m00s [ 82/364] Installing urw-base35-standar 100% | 8.1 MiB/s | 66.0 KiB | 00m00s [ 83/364] Installing urw-base35-z003-fo 100% | 47.8 MiB/s | 391.8 KiB | 00m00s [ 84/364] Installing urw-base35-fonts-0 100% | 5.5 MiB/s | 5.6 KiB | 00m00s [ 85/364] Installing google-droid-sans- 100% | 284.5 MiB/s | 6.3 MiB | 00m00s [ 86/364] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB | 00m00s [ 87/364] Installing graphviz-libs-0:12 100% | 262.0 MiB/s | 1.3 MiB | 00m00s [ 88/364] Installing jasper-libs-0:4.2. 100% | 225.8 MiB/s | 462.5 KiB | 00m00s [ 89/364] Installing LibRaw-0:0.21.3-1. 100% | 407.1 MiB/s | 2.4 MiB | 00m00s [ 90/364] Installing libssh-devel-0:0.1 100% | 176.1 MiB/s | 180.3 KiB | 00m00s [ 91/364] Installing annobin-docs-0:12. 100% | 97.4 MiB/s | 99.7 KiB | 00m00s [ 92/364] Installing libubsan-0:15.0.0- 100% | 225.3 MiB/s | 461.4 KiB | 00m00s [ 93/364] Installing libatomic-0:15.0.0 100% | 0.0 B/s | 66.9 KiB | 00m00s [ 94/364] Installing libasan-0:15.0.0-0 100% | 302.6 MiB/s | 1.5 MiB | 00m00s [ 95/364] Installing gcc-0:15.0.0-0.2.f 100% | 343.2 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perl-libnet-0:3.15 100% | 143.9 MiB/s | 294.7 KiB | 00m00s [109/364] Installing perl-IO-Socket-IP- 100% | 99.8 MiB/s | 102.2 KiB | 00m00s [110/364] Installing perl-AutoLoader-0: 100% | 20.5 MiB/s | 20.9 KiB | 00m00s [111/364] Installing perl-URI-0:5.31-1. 100% | 65.8 MiB/s | 269.6 KiB | 00m00s [112/364] Installing perl-File-Path-0:2 100% | 63.0 MiB/s | 64.5 KiB | 00m00s [113/364] Installing perl-Time-Local-2: 100% | 68.9 MiB/s | 70.6 KiB | 00m00s [114/364] Installing perl-Pod-Escapes-1 100% | 25.3 MiB/s | 25.9 KiB | 00m00s [115/364] Installing perl-Text-Tabs+Wra 100% | 23.3 MiB/s | 23.9 KiB | 00m00s [116/364] Installing perl-if-0:0.61.000 100% | 0.0 B/s | 6.2 KiB | 00m00s [117/364] Installing perl-locale-0:1.12 100% | 6.7 MiB/s | 6.9 KiB | 00m00s [118/364] Installing perl-Net-SSLeay-0: 100% | 179.1 MiB/s | 1.4 MiB | 00m00s [119/364] Installing perl-IO-Socket-SSL 100% | 230.3 MiB/s | 707.4 KiB | 00m00s [120/364] Installing perl-Class-Struct- 100% | 0.0 B/s | 25.9 KiB | 00m00s [121/364] Installing perl-Term-ANSIColo 100% | 96.9 MiB/s | 99.2 KiB | 00m00s [122/364] Installing perl-Term-Cap-0:1. 100% | 29.9 MiB/s | 30.6 KiB | 00m00s [123/364] Installing perl-File-Temp-1:0 100% | 160.2 MiB/s | 164.1 KiB | 00m00s [124/364] Installing perl-IPC-Open3-0:1 100% | 0.0 B/s | 23.3 KiB | 00m00s [125/364] Installing perl-POSIX-0:2.20- 100% | 160.4 MiB/s | 328.5 KiB | 00m00s [126/364] Installing perl-Pod-Simple-1: 100% | 185.7 MiB/s | 570.5 KiB | 00m00s [127/364] Installing perl-HTTP-Tiny-0:0 100% | 152.8 MiB/s | 156.4 KiB | 00m00s [128/364] Installing perl-Socket-4:2.03 100% | 133.9 MiB/s | 274.1 KiB | 00m00s [129/364] Installing perl-SelectSaver-0 100% | 0.0 B/s | 2.6 KiB | 00m00s [130/364] Installing perl-Symbol-0:1.09 100% | 0.0 B/s | 7.2 KiB | 00m00s [131/364] Installing perl-File-stat-0:1 100% | 0.0 B/s | 13.1 KiB | 00m00s [132/364] Installing perl-podlators-1:6 100% | 157.0 MiB/s | 321.4 KiB | 00m00s [133/364] Installing perl-Pod-Perldoc-0 100% | 82.6 MiB/s | 169.3 KiB | 00m00s [134/364] Installing perl-Text-ParseWor 100% | 0.0 B/s | 14.6 KiB | 00m00s [135/364] Installing perl-base-0:2.27-5 100% | 0.0 B/s | 12.9 KiB | 00m00s [136/364] Installing perl-Fcntl-0:1.18- 100% | 217.0 MiB/s | 222.2 KiB | 00m00s [137/364] Installing perl-mro-0:1.29-51 100% | 205.9 MiB/s | 210.8 KiB | 00m00s [138/364] Installing perl-overloading-0 100% | 5.4 MiB/s | 5.5 KiB | 00m00s [139/364] Installing perl-IO-0:1.55-512 100% | 157.9 MiB/s | 323.4 KiB | 00m00s [140/364] Installing perl-Pod-Usage-4:2 100% | 84.3 MiB/s | 86.3 KiB | 00m00s [141/364] Installing perl-vars-0:1.05-5 100% | 0.0 B/s | 4.3 KiB | 00m00s [142/364] Installing perl-constant-0:1. 100% | 26.7 MiB/s | 27.4 KiB | 00m00s [143/364] Installing perl-Errno-0:1.38- 100% | 0.0 B/s | 8.8 KiB | 00m00s [144/364] Installing perl-Scalar-List-U 100% | 139.0 MiB/s | 284.7 KiB | 00m00s [145/364] Installing perl-overload-0:1. 100% | 0.0 B/s | 71.9 KiB | 00m00s [146/364] Installing perl-Getopt-Std-0: 100% | 0.0 B/s | 11.7 KiB | 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python3-setuptools 100% | 167.8 MiB/s | 8.6 MiB | 00m00s [350/364] Installing libappstream-glib- 100% | 217.5 MiB/s | 1.7 MiB | 00m00s [351/364] Installing desktop-file-utils 100% | 209.0 MiB/s | 642.1 KiB | 00m00s [352/364] Installing annobin-plugin-gcc 100% | 57.4 MiB/s | 998.9 KiB | 00m00s [353/364] Installing gcc-plugin-annobin 100% | 4.2 MiB/s | 69.0 KiB | 00m00s [354/364] Installing flexiblas-devel-0: 100% | 464.8 MiB/s | 5.1 MiB | 00m00s [355/364] Installing libsedml-devel-2:2 100% | 338.6 MiB/s | 2.7 MiB | 00m00s [356/364] Installing bison-0:3.8.2-9.fc 100% | 257.7 MiB/s | 3.6 MiB | 00m00s [357/364] Installing flex-0:2.6.4-18.fc 100% | 173.3 MiB/s | 887.4 KiB | 00m00s [358/364] Installing libnuml-devel-0:1. 100% | 153.1 MiB/s | 313.6 KiB | 00m00s [359/364] Installing minizip-ng-compat- 100% | 88.4 MiB/s | 90.5 KiB | 00m00s [360/364] Installing zipper-devel-0:1.0 100% | 71.6 MiB/s | 73.3 KiB | 00m00s [361/364] Installing expat-devel-0:2.6. 100% | 66.9 MiB/s | 205.4 KiB | 00m00s 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Finish: build setup for COPASI-4.44.295-1.fc42.src.rpm Start: rpmbuild COPASI-4.44.295-1.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1724198400 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.MMYL33 + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + test -d /builddir/build/BUILD/COPASI-4.44.295-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/COPASI-4.44.295-build + /usr/bin/rm -rf /builddir/build/BUILD/COPASI-4.44.295-build + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-4.44.295-build + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-4.44.295-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.vK94nr + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + cd /builddir/build/BUILD/COPASI-4.44.295-build + rm -rf COPASI-Build-295 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/COPASI-Build-295.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd COPASI-Build-295 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -f license.txt ++ find copasi -type f '(' -name '*.cpp' ')' + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + touch -r copasi/ABiochem/1d.cpp copasi/ABiochem/1d.cpp.new + mv copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + touch -r copasi/ABiochem/CGene.cpp copasi/ABiochem/CGene.cpp.new + mv copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + touch -r copasi/ABiochem/Erdos.cpp copasi/ABiochem/Erdos.cpp.new + mv copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + touch -r copasi/ABiochem/ab.cpp copasi/ABiochem/ab.cpp.new + mv copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + touch -r copasi/ABiochem/abiochem.cpp copasi/ABiochem/abiochem.cpp.new + mv copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + touch -r copasi/ABiochem/clo.cpp copasi/ABiochem/clo.cpp.new + mv copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + touch -r copasi/ABiochem/wattstrog.cpp copasi/ABiochem/wattstrog.cpp.new + mv copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + touch -r copasi/CopasiDataModel/CDataModel.cpp copasi/CopasiDataModel/CDataModel.cpp.new + mv copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + touch -r copasi/CopasiDataModel/CInfo.cpp copasi/CopasiDataModel/CInfo.cpp.new + mv copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + touch -r copasi/CopasiSBW/SBWTranslator.cpp copasi/CopasiSBW/SBWTranslator.cpp.new + mv copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + touch -r copasi/CopasiSE/CopasiSE.cpp copasi/CopasiSE/CopasiSE.cpp.new + mv copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + touch -r copasi/CopasiUI/main.cpp copasi/CopasiUI/main.cpp.new + mv copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + touch -r copasi/MIRIAM/CBiologicalDescription.cpp copasi/MIRIAM/CBiologicalDescription.cpp.new + mv copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + touch -r copasi/MIRIAM/CConstants.cpp copasi/MIRIAM/CConstants.cpp.new + mv copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + touch -r copasi/MIRIAM/CCreator.cpp copasi/MIRIAM/CCreator.cpp.new + mv copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + touch -r copasi/MIRIAM/CMIRIAMResource.cpp copasi/MIRIAM/CMIRIAMResource.cpp.new + mv copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + touch -r copasi/MIRIAM/CModelMIRIAMInfo.cpp copasi/MIRIAM/CModelMIRIAMInfo.cpp.new + mv copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + touch -r copasi/MIRIAM/CModified.cpp copasi/MIRIAM/CModified.cpp.new + mv copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + touch -r copasi/MIRIAM/CRDFGraph.cpp copasi/MIRIAM/CRDFGraph.cpp.new + mv copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + touch -r copasi/MIRIAM/CRDFGraphConverter.cpp copasi/MIRIAM/CRDFGraphConverter.cpp.new + mv copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + touch -r copasi/MIRIAM/CRDFLiteral.cpp copasi/MIRIAM/CRDFLiteral.cpp.new + mv copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + touch -r copasi/MIRIAM/CRDFNode.cpp copasi/MIRIAM/CRDFNode.cpp.new + mv copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + touch -r copasi/MIRIAM/CRDFObject.cpp copasi/MIRIAM/CRDFObject.cpp.new + mv copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + touch -r copasi/MIRIAM/CRDFParser.cpp copasi/MIRIAM/CRDFParser.cpp.new + mv copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + touch -r copasi/MIRIAM/CRDFPredicate.cpp copasi/MIRIAM/CRDFPredicate.cpp.new + mv copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + touch -r copasi/MIRIAM/CRDFSubject.cpp copasi/MIRIAM/CRDFSubject.cpp.new + mv copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + touch -r copasi/MIRIAM/CRDFTriplet.cpp copasi/MIRIAM/CRDFTriplet.cpp.new + mv copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + touch -r copasi/MIRIAM/CRDFUtilities.cpp copasi/MIRIAM/CRDFUtilities.cpp.new + mv copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + touch -r copasi/MIRIAM/CRDFWriter.cpp copasi/MIRIAM/CRDFWriter.cpp.new + mv copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + touch -r copasi/MIRIAM/CRaptorInit.cpp copasi/MIRIAM/CRaptorInit.cpp.new + mv copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + touch -r copasi/MIRIAM/CReference.cpp copasi/MIRIAM/CReference.cpp.new + mv copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + touch -r copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new + mv copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + touch -r copasi/MIRIAMUI/CQCreatorDM.cpp copasi/MIRIAMUI/CQCreatorDM.cpp.new + mv copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + touch -r copasi/MIRIAMUI/CQMiriamWidget.cpp copasi/MIRIAMUI/CQMiriamWidget.cpp.new + mv copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + touch -r copasi/MIRIAMUI/CQModifiedDM.cpp copasi/MIRIAMUI/CQModifiedDM.cpp.new + mv copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeView.cpp copasi/MIRIAMUI/CQRDFTreeView.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeViewItem.cpp copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + touch -r copasi/MIRIAMUI/CQReferenceDM.cpp copasi/MIRIAMUI/CQReferenceDM.cpp.new + mv copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + touch -r copasi/OpenMP/CContext.cpp copasi/OpenMP/CContext.cpp.new + mv copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + touch -r copasi/OpenMP/CMathContext.cpp copasi/OpenMP/CMathContext.cpp.new + mv copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + touch -r copasi/OpenMP/CRandomContext.cpp copasi/OpenMP/CRandomContext.cpp.new + mv copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + touch -r copasi/Provenance/CProvenanceXMLWriter.cpp copasi/Provenance/CProvenanceXMLWriter.cpp.new + mv copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + touch -r copasi/UI/AboutDialog.cpp copasi/UI/AboutDialog.cpp.new + mv copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + touch -r copasi/UI/CColorScale.cpp copasi/UI/CColorScale.cpp.new + mv copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlot2YSelectionDialog.cpp copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlotSelectionDialog.cpp copasi/UI/CCopasiPlotSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + touch -r copasi/UI/CCopasiSelectionDialog.cpp copasi/UI/CCopasiSelectionDialog.cpp.new + mv copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + touch -r copasi/UI/CCopasiSelectionWidget.cpp copasi/UI/CCopasiSelectionWidget.cpp.new + mv copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + touch -r copasi/UI/CEntityProvenanceDialog.cpp copasi/UI/CEntityProvenanceDialog.cpp.new + mv copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + touch -r copasi/UI/CLNAResultSubwidget.cpp copasi/UI/CLNAResultSubwidget.cpp.new + mv copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + touch -r copasi/UI/CLNAResultWidget.cpp copasi/UI/CLNAResultWidget.cpp.new + mv copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + touch -r copasi/UI/CMCAResultSubwidget.cpp copasi/UI/CMCAResultSubwidget.cpp.new + mv copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + touch -r copasi/UI/CMCAResultWidget.cpp copasi/UI/CMCAResultWidget.cpp.new + mv copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + touch -r copasi/UI/CProgressBar.cpp copasi/UI/CProgressBar.cpp.new + mv copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + touch -r copasi/UI/CProvenanceDialog.cpp copasi/UI/CProvenanceDialog.cpp.new + mv copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + touch -r copasi/UI/CQAnalyticsWidget.cpp copasi/UI/CQAnalyticsWidget.cpp.new + mv copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + touch -r copasi/UI/CQArrayAnnotationsWidget.cpp copasi/UI/CQArrayAnnotationsWidget.cpp.new + mv copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + touch -r copasi/UI/CQArrayAnnotationsWidgetDM.cpp copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new + mv copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + touch -r copasi/UI/CQBaseDataModel.cpp copasi/UI/CQBaseDataModel.cpp.new + mv copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + touch -r copasi/UI/CQBaseTreeDataModel.cpp copasi/UI/CQBaseTreeDataModel.cpp.new + mv copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + touch -r copasi/UI/CQBrowserPane.cpp copasi/UI/CQBrowserPane.cpp.new + mv copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + touch -r copasi/UI/CQBrowserPaneDM.cpp copasi/UI/CQBrowserPaneDM.cpp.new + mv copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + touch -r copasi/UI/CQCheckModelWindow.cpp copasi/UI/CQCheckModelWindow.cpp.new + mv copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + touch -r copasi/UI/CQComboDelegate.cpp copasi/UI/CQComboDelegate.cpp.new + mv copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + touch -r copasi/UI/CQCompartment.cpp copasi/UI/CQCompartment.cpp.new + mv copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + touch -r copasi/UI/CQCompartmentCopyOptions.cpp copasi/UI/CQCompartmentCopyOptions.cpp.new + mv copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + touch -r copasi/UI/CQCompartmentDM.cpp copasi/UI/CQCompartmentDM.cpp.new + mv copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + touch -r copasi/UI/CQCompartmentsWidget.cpp copasi/UI/CQCompartmentsWidget.cpp.new + mv copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + touch -r copasi/UI/CQCopasiApplication.cpp copasi/UI/CQCopasiApplication.cpp.new + mv copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + touch -r copasi/UI/CQCrossSectionTaskWidget.cpp copasi/UI/CQCrossSectionTaskWidget.cpp.new + mv copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + touch -r copasi/UI/CQDateTimeEditDelegate.cpp copasi/UI/CQDateTimeEditDelegate.cpp.new + mv copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + touch -r copasi/UI/CQDependenciesWidget.cpp copasi/UI/CQDependenciesWidget.cpp.new + mv copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + touch -r copasi/UI/CQDependencyDialog.cpp copasi/UI/CQDependencyDialog.cpp.new + mv copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + touch -r copasi/UI/CQDependencyWidget.cpp copasi/UI/CQDependencyWidget.cpp.new + mv copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + touch -r copasi/UI/CQDifferentialEquations.cpp copasi/UI/CQDifferentialEquations.cpp.new + mv copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + touch -r copasi/UI/CQEFMListWidget.cpp copasi/UI/CQEFMListWidget.cpp.new + mv copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + touch -r copasi/UI/CQEFMNetReactionDM.cpp copasi/UI/CQEFMNetReactionDM.cpp.new + mv copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + touch -r copasi/UI/CQEFMReactionDM.cpp copasi/UI/CQEFMReactionDM.cpp.new + mv copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + touch -r copasi/UI/CQEFMResultWidget.cpp copasi/UI/CQEFMResultWidget.cpp.new + mv copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + touch -r copasi/UI/CQEFMSpeciesDM.cpp copasi/UI/CQEFMSpeciesDM.cpp.new + mv copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + touch -r copasi/UI/CQEFMWidget.cpp copasi/UI/CQEFMWidget.cpp.new + mv copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + touch -r copasi/UI/CQEventDM.cpp copasi/UI/CQEventDM.cpp.new + mv copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + touch -r copasi/UI/CQEventWidget1.cpp copasi/UI/CQEventWidget1.cpp.new + mv copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + touch -r copasi/UI/CQEventsWidget.cpp copasi/UI/CQEventsWidget.cpp.new + mv copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + touch -r copasi/UI/CQExpandModelData.cpp copasi/UI/CQExpandModelData.cpp.new + mv copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + touch -r copasi/UI/CQExperimentData.cpp copasi/UI/CQExperimentData.cpp.new + mv copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + touch -r copasi/UI/CQExperimentSelection.cpp copasi/UI/CQExperimentSelection.cpp.new + mv copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + touch -r copasi/UI/CQExpressionMmlStackedWidget.cpp copasi/UI/CQExpressionMmlStackedWidget.cpp.new + mv copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + touch -r copasi/UI/CQExpressionWidget.cpp copasi/UI/CQExpressionWidget.cpp.new + mv copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + touch -r copasi/UI/CQFittingItemWidget.cpp copasi/UI/CQFittingItemWidget.cpp.new + mv copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + touch -r copasi/UI/CQFittingResult.cpp copasi/UI/CQFittingResult.cpp.new + mv copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + touch -r copasi/UI/CQFittingResultTab1.cpp copasi/UI/CQFittingResultTab1.cpp.new + mv copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + touch -r copasi/UI/CQFittingWidget.cpp copasi/UI/CQFittingWidget.cpp.new + mv copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + touch -r copasi/UI/CQFluxModeDM.cpp copasi/UI/CQFluxModeDM.cpp.new + mv copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + touch -r copasi/UI/CQFunctionDM.cpp copasi/UI/CQFunctionDM.cpp.new + mv copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + touch -r copasi/UI/CQFunctionsWidget.cpp copasi/UI/CQFunctionsWidget.cpp.new + mv copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + touch -r copasi/UI/CQGlobalQuantitiesWidget.cpp copasi/UI/CQGlobalQuantitiesWidget.cpp.new + mv copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + touch -r copasi/UI/CQGlobalQuantityDM.cpp copasi/UI/CQGlobalQuantityDM.cpp.new + mv copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + touch -r copasi/UI/CQLNAWidget.cpp copasi/UI/CQLNAWidget.cpp.new + mv copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + touch -r copasi/UI/CQLayoutsDM.cpp copasi/UI/CQLayoutsDM.cpp.new + mv copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + touch -r copasi/UI/CQLayoutsWidget.cpp copasi/UI/CQLayoutsWidget.cpp.new + mv copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + touch -r copasi/UI/CQLyapResultWidget.cpp copasi/UI/CQLyapResultWidget.cpp.new + mv copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + touch -r copasi/UI/CQLyapWidget.cpp copasi/UI/CQLyapWidget.cpp.new + mv copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + touch -r copasi/UI/CQMCAWidget.cpp copasi/UI/CQMCAWidget.cpp.new + mv copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + touch -r copasi/UI/CQMathMatrixWidget.cpp copasi/UI/CQMathMatrixWidget.cpp.new + mv copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + touch -r copasi/UI/CQMatrixDialog.cpp copasi/UI/CQMatrixDialog.cpp.new + mv copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + touch -r copasi/UI/CQMergingData.cpp copasi/UI/CQMergingData.cpp.new + mv copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + touch -r copasi/UI/CQMessageBox.cpp copasi/UI/CQMessageBox.cpp.new + mv copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + touch -r copasi/UI/CQMmlScrollView.cpp copasi/UI/CQMmlScrollView.cpp.new + mv copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + touch -r copasi/UI/CQModelValue.cpp copasi/UI/CQModelValue.cpp.new + mv copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + touch -r copasi/UI/CQModelWidget.cpp copasi/UI/CQModelWidget.cpp.new + mv copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + touch -r copasi/UI/CQMoietiesTaskResult.cpp copasi/UI/CQMoietiesTaskResult.cpp.new + mv copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + touch -r copasi/UI/CQMoietiesTaskWidget.cpp copasi/UI/CQMoietiesTaskWidget.cpp.new + mv copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + touch -r copasi/UI/CQMultipleSelectionDialog.cpp copasi/UI/CQMultipleSelectionDialog.cpp.new + mv copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + touch -r copasi/UI/CQNameSelectionDialog.cpp copasi/UI/CQNameSelectionDialog.cpp.new + mv copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + touch -r copasi/UI/CQNotes.cpp copasi/UI/CQNotes.cpp.new + mv copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + touch -r copasi/UI/CQOptPopulation.cpp copasi/UI/CQOptPopulation.cpp.new + mv copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + touch -r copasi/UI/CQOptimizationResult.cpp copasi/UI/CQOptimizationResult.cpp.new + mv copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + touch -r copasi/UI/CQOptimizationWidget.cpp copasi/UI/CQOptimizationWidget.cpp.new + mv copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + touch -r copasi/UI/CQOscillationTaskWidget.cpp copasi/UI/CQOscillationTaskWidget.cpp.new + mv copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + touch -r copasi/UI/CQParameterEstimationResult.cpp copasi/UI/CQParameterEstimationResult.cpp.new + mv copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + touch -r copasi/UI/CQParameterGroupDM.cpp copasi/UI/CQParameterGroupDM.cpp.new + mv copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + touch -r copasi/UI/CQParameterGroupView.cpp copasi/UI/CQParameterGroupView.cpp.new + mv copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + touch -r copasi/UI/CQParameterOverviewDM.cpp copasi/UI/CQParameterOverviewDM.cpp.new + mv copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + touch -r copasi/UI/CQParameterOverviewWidget.cpp copasi/UI/CQParameterOverviewWidget.cpp.new + mv copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + touch -r copasi/UI/CQParameterResultItemModel.cpp copasi/UI/CQParameterResultItemModel.cpp.new + mv copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + touch -r copasi/UI/CQParameterSetsDM.cpp copasi/UI/CQParameterSetsDM.cpp.new + mv copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + touch -r copasi/UI/CQParameterSetsWidget.cpp copasi/UI/CQParameterSetsWidget.cpp.new + mv copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + touch -r copasi/UI/CQPlotDM.cpp copasi/UI/CQPlotDM.cpp.new + mv copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + touch -r copasi/UI/CQPlotsWidget.cpp copasi/UI/CQPlotsWidget.cpp.new + mv copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + touch -r copasi/UI/CQPreferenceDialog.cpp copasi/UI/CQPreferenceDialog.cpp.new + mv copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + touch -r copasi/UI/CQProgressDialog.cpp copasi/UI/CQProgressDialog.cpp.new + mv copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + touch -r copasi/UI/CQProgressItem.cpp copasi/UI/CQProgressItem.cpp.new + mv copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + touch -r copasi/UI/CQProgressItemBar.cpp copasi/UI/CQProgressItemBar.cpp.new + mv copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + touch -r copasi/UI/CQProgressItemText.cpp copasi/UI/CQProgressItemText.cpp.new + mv copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + touch -r copasi/UI/CQPushButtonDelegate.cpp copasi/UI/CQPushButtonDelegate.cpp.new + mv copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + touch -r copasi/UI/CQReactionDM.cpp copasi/UI/CQReactionDM.cpp.new + mv copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + touch -r copasi/UI/CQReactionsWidget.cpp copasi/UI/CQReactionsWidget.cpp.new + mv copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + touch -r copasi/UI/CQReportDM.cpp copasi/UI/CQReportDM.cpp.new + mv copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + touch -r copasi/UI/CQReportDefinition.cpp copasi/UI/CQReportDefinition.cpp.new + mv copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + touch -r copasi/UI/CQReportDefinitionSelect.cpp copasi/UI/CQReportDefinitionSelect.cpp.new + mv copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + touch -r copasi/UI/CQReportListItem.cpp copasi/UI/CQReportListItem.cpp.new + mv copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + touch -r copasi/UI/CQReportsWidget.cpp copasi/UI/CQReportsWidget.cpp.new + mv copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + touch -r copasi/UI/CQSBMLFileDialog.cpp copasi/UI/CQSBMLFileDialog.cpp.new + mv copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + touch -r copasi/UI/CQSEDMLFileDialog.cpp copasi/UI/CQSEDMLFileDialog.cpp.new + mv copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + touch -r copasi/UI/CQSEDMLImportDialog.cpp copasi/UI/CQSEDMLImportDialog.cpp.new + mv copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + touch -r copasi/UI/CQScanWidgetParameterSet.cpp copasi/UI/CQScanWidgetParameterSet.cpp.new + mv copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + touch -r copasi/UI/CQScrolledDependenciesWidget.cpp copasi/UI/CQScrolledDependenciesWidget.cpp.new + mv copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + touch -r copasi/UI/CQSensResultWidget.cpp copasi/UI/CQSensResultWidget.cpp.new + mv copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + touch -r copasi/UI/CQSimpleSelectionTree.cpp copasi/UI/CQSimpleSelectionTree.cpp.new + mv copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + touch -r copasi/UI/CQSortFilterProxyModel.cpp copasi/UI/CQSortFilterProxyModel.cpp.new + mv copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + touch -r copasi/UI/CQSpecieDM.cpp copasi/UI/CQSpecieDM.cpp.new + mv copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + touch -r copasi/UI/CQSpeciesDetail.cpp copasi/UI/CQSpeciesDetail.cpp.new + mv copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + touch -r copasi/UI/CQSpeciesWidget.cpp copasi/UI/CQSpeciesWidget.cpp.new + mv copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + touch -r copasi/UI/CQSpinBoxDelegate.cpp copasi/UI/CQSpinBoxDelegate.cpp.new + mv copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + touch -r copasi/UI/CQSplashWidget.cpp copasi/UI/CQSplashWidget.cpp.new + mv copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + touch -r copasi/UI/CQStartValueReset.cpp copasi/UI/CQStartValueReset.cpp.new + mv copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + touch -r copasi/UI/CQSteadyStateResult.cpp copasi/UI/CQSteadyStateResult.cpp.new + mv copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + touch -r copasi/UI/CQTSSAResultSubWidget.cpp copasi/UI/CQTSSAResultSubWidget.cpp.new + mv copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + touch -r copasi/UI/CQTSSAResultWidget.cpp copasi/UI/CQTSSAResultWidget.cpp.new + mv copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + touch -r copasi/UI/CQTSSATimeScaleWidget.cpp copasi/UI/CQTSSATimeScaleWidget.cpp.new + mv copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + touch -r copasi/UI/CQTSSAWidget.cpp copasi/UI/CQTSSAWidget.cpp.new + mv copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + touch -r copasi/UI/CQTabWidget.cpp copasi/UI/CQTabWidget.cpp.new + mv copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + touch -r copasi/UI/CQTableView.cpp copasi/UI/CQTableView.cpp.new + mv copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + touch -r copasi/UI/CQTableWidget.cpp copasi/UI/CQTableWidget.cpp.new + mv copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + touch -r copasi/UI/CQTaskBtnWidget.cpp copasi/UI/CQTaskBtnWidget.cpp.new + mv copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + touch -r copasi/UI/CQTaskHeaderWidget.cpp copasi/UI/CQTaskHeaderWidget.cpp.new + mv copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + touch -r copasi/UI/CQTaskMethodWidget.cpp copasi/UI/CQTaskMethodWidget.cpp.new + mv copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + touch -r copasi/UI/CQTaskThread.cpp copasi/UI/CQTaskThread.cpp.new + mv copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + touch -r copasi/UI/CQTextDialog.cpp copasi/UI/CQTextDialog.cpp.new + mv copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + touch -r copasi/UI/CQThread.cpp copasi/UI/CQThread.cpp.new + mv copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + touch -r copasi/UI/CQTimeSensWidget.cpp copasi/UI/CQTimeSensWidget.cpp.new + mv copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + touch -r copasi/UI/CQTimeSeriesDM.cpp copasi/UI/CQTimeSeriesDM.cpp.new + mv copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + touch -r copasi/UI/CQTimeSeriesWidget.cpp copasi/UI/CQTimeSeriesWidget.cpp.new + mv copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + touch -r copasi/UI/CQTrajectoryWidget.cpp copasi/UI/CQTrajectoryWidget.cpp.new + mv copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + touch -r copasi/UI/CQUndoTester.cpp copasi/UI/CQUndoTester.cpp.new + mv copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + touch -r copasi/UI/CQUnitDM.cpp copasi/UI/CQUnitDM.cpp.new + mv copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + touch -r copasi/UI/CQUnitDetail.cpp copasi/UI/CQUnitDetail.cpp.new + mv copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + touch -r copasi/UI/CQUnitsWidget.cpp copasi/UI/CQUnitsWidget.cpp.new + mv copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + touch -r copasi/UI/CQUpdateAvogadro.cpp copasi/UI/CQUpdateAvogadro.cpp.new + mv copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + touch -r copasi/UI/CQUpdatesWidget.cpp copasi/UI/CQUpdatesWidget.cpp.new + mv copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + touch -r copasi/UI/CQValidator.cpp copasi/UI/CQValidator.cpp.new + mv copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + touch -r copasi/UI/CQValidatorUnit.cpp copasi/UI/CQValidatorUnit.cpp.new + mv copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + touch -r copasi/UI/CScanContainerWidget.cpp copasi/UI/CScanContainerWidget.cpp.new + mv copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + touch -r copasi/UI/CScanItemData.cpp copasi/UI/CScanItemData.cpp.new + mv copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + touch -r copasi/UI/CScanWidgetRandom.cpp copasi/UI/CScanWidgetRandom.cpp.new + mv copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + touch -r copasi/UI/CScanWidgetRepeat.cpp copasi/UI/CScanWidgetRepeat.cpp.new + mv copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + touch -r copasi/UI/CScanWidgetScan.cpp copasi/UI/CScanWidgetScan.cpp.new + mv copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + touch -r copasi/UI/CScanWidgetTask.cpp copasi/UI/CScanWidgetTask.cpp.new + mv copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + touch -r copasi/UI/CUpDownSubwidget.cpp copasi/UI/CUpDownSubwidget.cpp.new + mv copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + touch -r copasi/UI/CWindowInterface.cpp copasi/UI/CWindowInterface.cpp.new + mv copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + touch -r copasi/UI/CopasiFileDialog.cpp copasi/UI/CopasiFileDialog.cpp.new + mv copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + touch -r copasi/UI/CopasiSlider.cpp copasi/UI/CopasiSlider.cpp.new + mv copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + touch -r copasi/UI/DataModelGUI.cpp copasi/UI/DataModelGUI.cpp.new + mv copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + touch -r copasi/UI/DefaultplotDialog.cpp copasi/UI/DefaultplotDialog.cpp.new + mv copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + touch -r copasi/UI/FunctionWidget1.cpp copasi/UI/FunctionWidget1.cpp.new + mv copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + touch -r copasi/UI/MyLineEdit.cpp copasi/UI/MyLineEdit.cpp.new + mv copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + touch -r copasi/UI/ObjectBrowserDialog.cpp copasi/UI/ObjectBrowserDialog.cpp.new + mv copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + touch -r copasi/UI/ObjectBrowserItem.cpp copasi/UI/ObjectBrowserItem.cpp.new + mv copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + touch -r copasi/UI/ObjectBrowserWidget.cpp copasi/UI/ObjectBrowserWidget.cpp.new + mv copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + touch -r copasi/UI/ReactionsWidget1.cpp copasi/UI/ReactionsWidget1.cpp.new + mv copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + touch -r copasi/UI/ScanWidget.cpp copasi/UI/ScanWidget.cpp.new + mv copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + touch -r copasi/UI/SensWidgetComboBox.cpp copasi/UI/SensWidgetComboBox.cpp.new + mv copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + touch -r copasi/UI/SensitivitiesWidget.cpp copasi/UI/SensitivitiesWidget.cpp.new + mv copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + touch -r copasi/UI/SliderDialog.cpp copasi/UI/SliderDialog.cpp.new + mv copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + touch -r copasi/UI/SliderSettingsDialog.cpp copasi/UI/SliderSettingsDialog.cpp.new + mv copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + touch -r copasi/UI/StateSubwidget.cpp copasi/UI/StateSubwidget.cpp.new + mv copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + touch -r copasi/UI/SteadyStateWidget.cpp copasi/UI/SteadyStateWidget.cpp.new + mv copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + touch -r copasi/UI/TaskWidget.cpp copasi/UI/TaskWidget.cpp.new + mv copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + touch -r copasi/UI/copasiWidget.cpp copasi/UI/copasiWidget.cpp.new + mv copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + touch -r copasi/UI/copasiui3window.cpp copasi/UI/copasiui3window.cpp.new + mv copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + touch -r copasi/UI/listviews.cpp copasi/UI/listviews.cpp.new + mv copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + touch -r copasi/UI/objectdebug.cpp copasi/UI/objectdebug.cpp.new + mv copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + touch -r copasi/UI/parametertable.cpp copasi/UI/parametertable.cpp.new + mv copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + touch -r copasi/UI/qtUtilities.cpp copasi/UI/qtUtilities.cpp.new + mv copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + touch -r copasi/ViewCurrentUI/arguments.cpp copasi/ViewCurrentUI/arguments.cpp.new + mv copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + touch -r copasi/ViewCurrentUI/main.cpp copasi/ViewCurrentUI/main.cpp.new + mv copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + touch -r copasi/ViewCurrentUI/worker.cpp copasi/ViewCurrentUI/worker.cpp.new + mv copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + touch -r copasi/analytics/CAnalyticsMethod.cpp copasi/analytics/CAnalyticsMethod.cpp.new + mv copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + touch -r copasi/analytics/CAnalyticsProblem.cpp copasi/analytics/CAnalyticsProblem.cpp.new + mv copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + touch -r copasi/analytics/CAnalyticsTask.cpp copasi/analytics/CAnalyticsTask.cpp.new + mv copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + touch -r copasi/analytics/CStatistics.cpp copasi/analytics/CStatistics.cpp.new + mv copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + touch -r copasi/barChart/CQ3DBarsModifier.cpp copasi/barChart/CQ3DBarsModifier.cpp.new + mv copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + touch -r copasi/barChart/CQBaseWidget.cpp copasi/barChart/CQBaseWidget.cpp.new + mv copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + touch -r copasi/barChart/qwt3dBars.cpp copasi/barChart/qwt3dBars.cpp.new + mv copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + touch -r copasi/barChart/qwt3dColor.cpp copasi/barChart/qwt3dColor.cpp.new + mv copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + touch -r copasi/barChart/qwt3dPlot.cpp copasi/barChart/qwt3dPlot.cpp.new + mv copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + touch -r copasi/barChart/qwt3dScale.cpp copasi/barChart/qwt3dScale.cpp.new + mv copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + touch -r copasi/bindings/R/RProcessCallback.cpp copasi/bindings/R/RProcessCallback.cpp.new + mv copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + touch -r copasi/bindings/R/local.cpp copasi/bindings/R/local.cpp.new + mv copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + touch -r copasi/bindings/common/downcast_common.cpp copasi/bindings/common/downcast_common.cpp.new + mv copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + touch -r copasi/bindings/common/local_common.cpp copasi/bindings/common/local_common.cpp.new + mv copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + touch -r copasi/bindings/cpp_examples/assignParameterSet/main.cpp copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new + mv copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + touch -r copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new + mv copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + touch -r copasi/bindings/cpp_examples/changeValues/changeValues.cpp copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new + mv copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + touch -r copasi/bindings/cpp_examples/example1/example1.cpp copasi/bindings/cpp_examples/example1/example1.cpp.new + mv copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + touch -r copasi/bindings/cpp_examples/example10/example10.cpp copasi/bindings/cpp_examples/example10/example10.cpp.new + mv copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + touch -r copasi/bindings/cpp_examples/example2/example2.cpp copasi/bindings/cpp_examples/example2/example2.cpp.new + mv copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + touch -r copasi/bindings/cpp_examples/example3/example3.cpp copasi/bindings/cpp_examples/example3/example3.cpp.new + mv copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + touch -r copasi/bindings/cpp_examples/example4/example4.cpp copasi/bindings/cpp_examples/example4/example4.cpp.new + mv copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + touch -r copasi/bindings/cpp_examples/example5/example5.cpp copasi/bindings/cpp_examples/example5/example5.cpp.new + mv copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + touch -r copasi/bindings/cpp_examples/example6/example6.cpp copasi/bindings/cpp_examples/example6/example6.cpp.new + mv copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + touch -r copasi/bindings/cpp_examples/example7/example7.cpp copasi/bindings/cpp_examples/example7/example7.cpp.new + mv copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + touch -r copasi/bindings/cpp_examples/example8/example8.cpp copasi/bindings/cpp_examples/example8/example8.cpp.new + mv copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + touch -r copasi/bindings/cpp_examples/example9/example9.cpp copasi/bindings/cpp_examples/example9/example9.cpp.new + mv copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + touch -r copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new + mv copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + touch -r copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new + mv copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + touch -r copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new + mv copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + touch -r copasi/bindings/cpp_examples/renameActiveReport/main.cpp copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new + mv copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + touch -r copasi/bindings/cpp_examples/renderLayout/main.cpp copasi/bindings/cpp_examples/renderLayout/main.cpp.new + mv copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + touch -r copasi/bindings/cpp_examples/runScan/runScan.cpp copasi/bindings/cpp_examples/runScan/runScan.cpp.new + mv copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + touch -r copasi/bindings/cpp_examples/runSedML/runSedML.cpp copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new + mv copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + touch -r copasi/bindings/csharp/local.cpp copasi/bindings/csharp/local.cpp.new + mv copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + touch -r copasi/bindings/java/local.cpp copasi/bindings/java/local.cpp.new + mv copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + touch -r copasi/bindings/octave/local.cpp copasi/bindings/octave/local.cpp.new + mv copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + touch -r copasi/bindings/perl/local.cpp copasi/bindings/perl/local.cpp.new + mv copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + touch -r copasi/bindings/python/local.cpp copasi/bindings/python/local.cpp.new + mv copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + touch -r copasi/commandline/CConfigurationFile.cpp copasi/commandline/CConfigurationFile.cpp.new + mv copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + touch -r copasi/commandline/CLocaleString.cpp copasi/commandline/CLocaleString.cpp.new + mv copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + touch -r copasi/commandline/COptionParser.cpp copasi/commandline/COptionParser.cpp.new + mv copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + touch -r copasi/commandline/COptions.cpp copasi/commandline/COptions.cpp.new + mv copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + touch -r copasi/compareExpressions/CEvaluationNodeNormalizer.cpp copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new + mv copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + touch -r copasi/compareExpressions/CNormalBase.cpp copasi/compareExpressions/CNormalBase.cpp.new + mv copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + touch -r copasi/compareExpressions/CNormalCall.cpp copasi/compareExpressions/CNormalCall.cpp.new + mv copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + touch -r copasi/compareExpressions/CNormalChoice.cpp copasi/compareExpressions/CNormalChoice.cpp.new + mv copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + touch -r copasi/compareExpressions/CNormalChoiceLogical.cpp copasi/compareExpressions/CNormalChoiceLogical.cpp.new + mv copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + touch -r copasi/compareExpressions/CNormalFraction.cpp copasi/compareExpressions/CNormalFraction.cpp.new + mv copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + touch -r copasi/compareExpressions/CNormalFunction.cpp copasi/compareExpressions/CNormalFunction.cpp.new + mv copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + touch -r copasi/compareExpressions/CNormalGeneralPower.cpp copasi/compareExpressions/CNormalGeneralPower.cpp.new + mv copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + touch -r copasi/compareExpressions/CNormalItem.cpp copasi/compareExpressions/CNormalItem.cpp.new + mv copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + touch -r copasi/compareExpressions/CNormalItemPower.cpp copasi/compareExpressions/CNormalItemPower.cpp.new + mv copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + touch -r copasi/compareExpressions/CNormalLcm.cpp copasi/compareExpressions/CNormalLcm.cpp.new + mv copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + touch -r copasi/compareExpressions/CNormalLogical.cpp copasi/compareExpressions/CNormalLogical.cpp.new + mv copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + touch -r copasi/compareExpressions/CNormalLogicalItem.cpp copasi/compareExpressions/CNormalLogicalItem.cpp.new + mv copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + touch -r copasi/compareExpressions/CNormalProduct.cpp copasi/compareExpressions/CNormalProduct.cpp.new + mv copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + touch -r copasi/compareExpressions/CNormalSum.cpp copasi/compareExpressions/CNormalSum.cpp.new + mv copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + touch -r copasi/compareExpressions/CNormalTranslation.cpp copasi/compareExpressions/CNormalTranslation.cpp.new + mv copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + touch -r copasi/compareExpressions/ConvertToCEvaluationNode.cpp copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new + mv copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + touch -r copasi/compareExpressions/compare_utilities.cpp copasi/compareExpressions/compare_utilities.cpp.new + mv copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + touch -r copasi/compareExpressions/stresstest/stress_test.cpp copasi/compareExpressions/stresstest/stress_test.cpp.new + mv copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + touch -r copasi/compareExpressions/unittests/test.cpp copasi/compareExpressions/unittests/test.cpp.new + mv copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + touch -r copasi/compareExpressions/unittests/test_biomodels217_expression.cpp copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new + mv copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + touch -r copasi/compareExpressions/unittests/test_cnormallogical.cpp copasi/compareExpressions/unittests/test_cnormallogical.cpp.new + mv copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + touch -r copasi/compareExpressions/unittests/test_compare_utilities.cpp copasi/compareExpressions/unittests/test_compare_utilities.cpp.new + mv copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + touch -r copasi/compareExpressions/unittests/test_depth_first_iterator.cpp copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new + mv copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + touch -r copasi/compareExpressions/unittests/test_expression_comparison.cpp copasi/compareExpressions/unittests/test_expression_comparison.cpp.new + mv copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + touch -r copasi/compareExpressions/unittests/test_node_conversion.cpp copasi/compareExpressions/unittests/test_node_conversion.cpp.new + mv copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + touch -r copasi/compareExpressions/unittests/test_normalform.cpp copasi/compareExpressions/unittests/test_normalform.cpp.new + mv copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + touch -r copasi/compareExpressions/unittests/test_simplify.cpp copasi/compareExpressions/unittests/test_simplify.cpp.new + mv copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArray.cpp.new copasi/core/CArray.cpp + touch -r copasi/core/CArray.cpp copasi/core/CArray.cpp.new + mv copasi/core/CArray.cpp.new copasi/core/CArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + touch -r copasi/core/CArrayElementReference.cpp copasi/core/CArrayElementReference.cpp.new + mv copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + touch -r copasi/core/CCommonName.cpp copasi/core/CCommonName.cpp.new + mv copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCore.cpp.new copasi/core/CCore.cpp + touch -r copasi/core/CCore.cpp copasi/core/CCore.cpp.new + mv copasi/core/CCore.cpp.new copasi/core/CCore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + touch -r copasi/core/CDataArray.cpp copasi/core/CDataArray.cpp.new + mv copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + touch -r copasi/core/CDataContainer.cpp copasi/core/CDataContainer.cpp.new + mv copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + touch -r copasi/core/CDataObject.cpp copasi/core/CDataObject.cpp.new + mv copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + touch -r copasi/core/CDataObjectMap.cpp copasi/core/CDataObjectMap.cpp.new + mv copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + touch -r copasi/core/CDataString.cpp copasi/core/CDataString.cpp.new + mv copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + touch -r copasi/core/CDataTimer.cpp copasi/core/CDataTimer.cpp.new + mv copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + touch -r copasi/core/CObjectInterface.cpp copasi/core/CObjectInterface.cpp.new + mv copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + touch -r copasi/core/CRegisteredCommonName.cpp copasi/core/CRegisteredCommonName.cpp.new + mv copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + touch -r copasi/core/CRootContainer.cpp copasi/core/CRootContainer.cpp.new + mv copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + touch -r copasi/crosssection/CCrossSectionMethod.cpp copasi/crosssection/CCrossSectionMethod.cpp.new + mv copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + touch -r copasi/crosssection/CCrossSectionProblem.cpp copasi/crosssection/CCrossSectionProblem.cpp.new + mv copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + touch -r copasi/crosssection/CCrossSectionTask.cpp copasi/crosssection/CCrossSectionTask.cpp.new + mv copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternMethod.cpp copasi/elementaryFluxModes/CBitPatternMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTree.cpp copasi/elementaryFluxModes/CBitPatternTree.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeNode.cpp copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + touch -r copasi/elementaryFluxModes/CEFMAlgorithm.cpp copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new + mv copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + touch -r copasi/elementaryFluxModes/CEFMMethod.cpp copasi/elementaryFluxModes/CEFMMethod.cpp.new + mv copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + touch -r copasi/elementaryFluxModes/CEFMProblem.cpp copasi/elementaryFluxModes/CEFMProblem.cpp.new + mv copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + touch -r copasi/elementaryFluxModes/CEFMTask.cpp copasi/elementaryFluxModes/CEFMTask.cpp.new + mv copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + touch -r copasi/elementaryFluxModes/CFluxMode.cpp copasi/elementaryFluxModes/CFluxMode.cpp.new + mv copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + touch -r copasi/elementaryFluxModes/CFluxScore.cpp copasi/elementaryFluxModes/CFluxScore.cpp.new + mv copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + touch -r copasi/elementaryFluxModes/CSSAMethod.cpp copasi/elementaryFluxModes/CSSAMethod.cpp.new + mv copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + touch -r copasi/elementaryFluxModes/CStepMatrix.cpp copasi/elementaryFluxModes/CStepMatrix.cpp.new + mv copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + touch -r copasi/elementaryFluxModes/CStepMatrixColumn.cpp copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new + mv copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + touch -r copasi/elementaryFluxModes/CTableauLine.cpp copasi/elementaryFluxModes/CTableauLine.cpp.new + mv copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + touch -r copasi/elementaryFluxModes/CTableauMatrix.cpp copasi/elementaryFluxModes/CTableauMatrix.cpp.new + mv copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + touch -r copasi/elementaryFluxModes/CZeroSet.cpp copasi/elementaryFluxModes/CZeroSet.cpp.new + mv copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + touch -r copasi/function/CCallParameters.cpp copasi/function/CCallParameters.cpp.new + mv copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + touch -r copasi/function/CDerive.cpp copasi/function/CDerive.cpp.new + mv copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + touch -r copasi/function/CEvaluationLexer_lex.cpp copasi/function/CEvaluationLexer_lex.cpp.new + mv copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + touch -r copasi/function/CEvaluationNode.cpp copasi/function/CEvaluationNode.cpp.new + mv copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + touch -r copasi/function/CEvaluationNodeCall.cpp copasi/function/CEvaluationNodeCall.cpp.new + mv copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + touch -r copasi/function/CEvaluationNodeChoice.cpp copasi/function/CEvaluationNodeChoice.cpp.new + mv copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + touch -r copasi/function/CEvaluationNodeConstant.cpp copasi/function/CEvaluationNodeConstant.cpp.new + mv copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + touch -r copasi/function/CEvaluationNodeDelay.cpp copasi/function/CEvaluationNodeDelay.cpp.new + mv copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + touch -r copasi/function/CEvaluationNodeFunction.cpp copasi/function/CEvaluationNodeFunction.cpp.new + mv copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + touch -r copasi/function/CEvaluationNodeLogical.cpp copasi/function/CEvaluationNodeLogical.cpp.new + mv copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + touch -r copasi/function/CEvaluationNodeNumber.cpp copasi/function/CEvaluationNodeNumber.cpp.new + mv copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + touch -r copasi/function/CEvaluationNodeObject.cpp copasi/function/CEvaluationNodeObject.cpp.new + mv copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + touch -r copasi/function/CEvaluationNodeOperator.cpp copasi/function/CEvaluationNodeOperator.cpp.new + mv copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + touch -r copasi/function/CEvaluationNodeStructure.cpp copasi/function/CEvaluationNodeStructure.cpp.new + mv copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + touch -r copasi/function/CEvaluationNodeUnit.cpp copasi/function/CEvaluationNodeUnit.cpp.new + mv copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + touch -r copasi/function/CEvaluationNodeVariable.cpp copasi/function/CEvaluationNodeVariable.cpp.new + mv copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + touch -r copasi/function/CEvaluationNodeVector.cpp copasi/function/CEvaluationNodeVector.cpp.new + mv copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + touch -r copasi/function/CEvaluationNodeWhiteSpace.cpp copasi/function/CEvaluationNodeWhiteSpace.cpp.new + mv copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + touch -r copasi/function/CEvaluationParser_yacc.cpp copasi/function/CEvaluationParser_yacc.cpp.new + mv copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + touch -r copasi/function/CEvaluationTree.cpp copasi/function/CEvaluationTree.cpp.new + mv copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + touch -r copasi/function/CExpression.cpp copasi/function/CExpression.cpp.new + mv copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + touch -r copasi/function/CFunction.cpp copasi/function/CFunction.cpp.new + mv copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + touch -r copasi/function/CFunctionAnalyzer.cpp copasi/function/CFunctionAnalyzer.cpp.new + mv copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + touch -r copasi/function/CFunctionDB.cpp copasi/function/CFunctionDB.cpp.new + mv copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + touch -r copasi/function/CFunctionParameter.cpp copasi/function/CFunctionParameter.cpp.new + mv copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + touch -r copasi/function/CFunctionParameters.cpp copasi/function/CFunctionParameters.cpp.new + mv copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + touch -r copasi/function/CKinFunction.cpp copasi/function/CKinFunction.cpp.new + mv copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + touch -r copasi/function/CMassAction.cpp copasi/function/CMassAction.cpp.new + mv copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + touch -r copasi/function/CNodeK.cpp copasi/function/CNodeK.cpp.new + mv copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + touch -r copasi/layout/CAbstractLayoutInterface.cpp copasi/layout/CAbstractLayoutInterface.cpp.new + mv copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + touch -r copasi/layout/CCopasiSpringLayout.cpp copasi/layout/CCopasiSpringLayout.cpp.new + mv copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + touch -r copasi/layout/CLBase.cpp copasi/layout/CLBase.cpp.new + mv copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + touch -r copasi/layout/CLColorDefinition.cpp copasi/layout/CLColorDefinition.cpp.new + mv copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + touch -r copasi/layout/CLCurve.cpp copasi/layout/CLCurve.cpp.new + mv copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + touch -r copasi/layout/CLDefaultStyles.cpp copasi/layout/CLDefaultStyles.cpp.new + mv copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + touch -r copasi/layout/CLEllipse.cpp copasi/layout/CLEllipse.cpp.new + mv copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + touch -r copasi/layout/CLGlobalRenderInformation.cpp copasi/layout/CLGlobalRenderInformation.cpp.new + mv copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + touch -r copasi/layout/CLGlobalStyle.cpp copasi/layout/CLGlobalStyle.cpp.new + mv copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + touch -r copasi/layout/CLGlyphs.cpp copasi/layout/CLGlyphs.cpp.new + mv copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + touch -r copasi/layout/CLGradientBase.cpp copasi/layout/CLGradientBase.cpp.new + mv copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + touch -r copasi/layout/CLGradientStop.cpp copasi/layout/CLGradientStop.cpp.new + mv copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + touch -r copasi/layout/CLGradientStops.cpp copasi/layout/CLGradientStops.cpp.new + mv copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + touch -r copasi/layout/CLGraphicalObject.cpp copasi/layout/CLGraphicalObject.cpp.new + mv copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + touch -r copasi/layout/CLGraphicalPrimitive1D.cpp copasi/layout/CLGraphicalPrimitive1D.cpp.new + mv copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + touch -r copasi/layout/CLGraphicalPrimitive2D.cpp copasi/layout/CLGraphicalPrimitive2D.cpp.new + mv copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + touch -r copasi/layout/CLGroup.cpp copasi/layout/CLGroup.cpp.new + mv copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + touch -r copasi/layout/CLImage.cpp copasi/layout/CLImage.cpp.new + mv copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + touch -r copasi/layout/CLImageTexturizer.cpp copasi/layout/CLImageTexturizer.cpp.new + mv copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + touch -r copasi/layout/CLLayoutRenderer.cpp copasi/layout/CLLayoutRenderer.cpp.new + mv copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + touch -r copasi/layout/CLLineEnding.cpp copasi/layout/CLLineEnding.cpp.new + mv copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + touch -r copasi/layout/CLLinearGradient.cpp copasi/layout/CLLinearGradient.cpp.new + mv copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + touch -r copasi/layout/CLLocalRenderInformation.cpp copasi/layout/CLLocalRenderInformation.cpp.new + mv copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + touch -r copasi/layout/CLLocalStyle.cpp copasi/layout/CLLocalStyle.cpp.new + mv copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + touch -r copasi/layout/CLPolygon.cpp copasi/layout/CLPolygon.cpp.new + mv copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + touch -r copasi/layout/CLRadialGradient.cpp copasi/layout/CLRadialGradient.cpp.new + mv copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + touch -r copasi/layout/CLReactionGlyph.cpp copasi/layout/CLReactionGlyph.cpp.new + mv copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + touch -r copasi/layout/CLRectangle.cpp copasi/layout/CLRectangle.cpp.new + mv copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + touch -r copasi/layout/CLRelAbsVector.cpp copasi/layout/CLRelAbsVector.cpp.new + mv copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + touch -r copasi/layout/CLRenderCubicBezier.cpp copasi/layout/CLRenderCubicBezier.cpp.new + mv copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + touch -r copasi/layout/CLRenderCurve.cpp copasi/layout/CLRenderCurve.cpp.new + mv copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + touch -r copasi/layout/CLRenderFlattener.cpp copasi/layout/CLRenderFlattener.cpp.new + mv copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + touch -r copasi/layout/CLRenderInformationBase.cpp copasi/layout/CLRenderInformationBase.cpp.new + mv copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + touch -r copasi/layout/CLRenderPoint.cpp copasi/layout/CLRenderPoint.cpp.new + mv copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + touch -r copasi/layout/CLRenderResolver.cpp copasi/layout/CLRenderResolver.cpp.new + mv copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + touch -r copasi/layout/CLSimpleImageTexturizer.cpp copasi/layout/CLSimpleImageTexturizer.cpp.new + mv copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + touch -r copasi/layout/CLStyle.cpp copasi/layout/CLStyle.cpp.new + mv copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + touch -r copasi/layout/CLText.cpp copasi/layout/CLText.cpp.new + mv copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + touch -r copasi/layout/CLTransformation.cpp copasi/layout/CLTransformation.cpp.new + mv copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + touch -r copasi/layout/CLTransformation2D.cpp copasi/layout/CLTransformation2D.cpp.new + mv copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + touch -r copasi/layout/CLUnresolvedReferenceException.cpp copasi/layout/CLUnresolvedReferenceException.cpp.new + mv copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + touch -r copasi/layout/CLayout.cpp copasi/layout/CLayout.cpp.new + mv copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + touch -r copasi/layout/CLayoutEngine.cpp copasi/layout/CLayoutEngine.cpp.new + mv copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + touch -r copasi/layout/CLayoutInitializer.cpp copasi/layout/CLayoutInitializer.cpp.new + mv copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + touch -r copasi/layout/CLayoutState.cpp copasi/layout/CLayoutState.cpp.new + mv copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + touch -r copasi/layout/CListOfLayouts.cpp copasi/layout/CListOfLayouts.cpp.new + mv copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + touch -r copasi/layout/SBMLDocumentLoader.cpp copasi/layout/SBMLDocumentLoader.cpp.new + mv copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + touch -r copasi/layout/utility_classes.cpp copasi/layout/utility_classes.cpp.new + mv copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + touch -r copasi/layoutUI/BezierCurve.cpp copasi/layoutUI/BezierCurve.cpp.new + mv copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + touch -r copasi/layoutUI/CArrow.cpp copasi/layoutUI/CArrow.cpp.new + mv copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + touch -r copasi/layoutUI/CCompartmentGraphNode.cpp copasi/layoutUI/CCompartmentGraphNode.cpp.new + mv copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + touch -r copasi/layoutUI/CDataEntity.cpp copasi/layoutUI/CDataEntity.cpp.new + mv copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + touch -r copasi/layoutUI/CGraphCurve.cpp copasi/layoutUI/CGraphCurve.cpp.new + mv copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + touch -r copasi/layoutUI/CGraphNode.cpp copasi/layoutUI/CGraphNode.cpp.new + mv copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + touch -r copasi/layoutUI/CLabel.cpp copasi/layoutUI/CLabel.cpp.new + mv copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + touch -r copasi/layoutUI/CQAutolayoutWizard.cpp copasi/layoutUI/CQAutolayoutWizard.cpp.new + mv copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + touch -r copasi/layoutUI/CQCurrentValueTable.cpp copasi/layoutUI/CQCurrentValueTable.cpp.new + mv copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + touch -r copasi/layoutUI/CQFontRenderer.cpp copasi/layoutUI/CQFontRenderer.cpp.new + mv copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + touch -r copasi/layoutUI/CQGLLayoutPainter.cpp copasi/layoutUI/CQGLLayoutPainter.cpp.new + mv copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + touch -r copasi/layoutUI/CQGLLayoutViewer.cpp copasi/layoutUI/CQGLLayoutViewer.cpp.new + mv copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + touch -r copasi/layoutUI/CQGLNetworkPainter.cpp copasi/layoutUI/CQGLNetworkPainter.cpp.new + mv copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + touch -r copasi/layoutUI/CQGLViewport.cpp copasi/layoutUI/CQGLViewport.cpp.new + mv copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + touch -r copasi/layoutUI/CQLayoutMainWindow.cpp copasi/layoutUI/CQLayoutMainWindow.cpp.new + mv copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + touch -r copasi/layoutUI/CQLayoutThread.cpp copasi/layoutUI/CQLayoutThread.cpp.new + mv copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + touch -r copasi/layoutUI/CQNewMainWindow.cpp copasi/layoutUI/CQNewMainWindow.cpp.new + mv copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + touch -r copasi/layoutUI/CQPlayerControlWidget.cpp copasi/layoutUI/CQPlayerControlWidget.cpp.new + mv copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + touch -r copasi/layoutUI/CQQtImageTexturizer.cpp copasi/layoutUI/CQQtImageTexturizer.cpp.new + mv copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + touch -r copasi/layoutUI/CQScreenshotOptionsDialog.cpp copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new + mv copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + touch -r copasi/layoutUI/CQSpringLayoutParameterWindow.cpp copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new + mv copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + touch -r copasi/layoutUI/CSimSummaryInfo.cpp copasi/layoutUI/CSimSummaryInfo.cpp.new + mv copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + touch -r copasi/layoutUI/CVisParameters.cpp copasi/layoutUI/CVisParameters.cpp.new + mv copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + touch -r copasi/layoutUI/FontChooser.cpp copasi/layoutUI/FontChooser.cpp.new + mv copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + touch -r copasi/layoutUI/NodeSizePanel.cpp copasi/layoutUI/NodeSizePanel.cpp.new + mv copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + touch -r copasi/layoutUI/ParaPanel.cpp copasi/layoutUI/ParaPanel.cpp.new + mv copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + touch -r copasi/layoutUI/RGTextureSpec.cpp copasi/layoutUI/RGTextureSpec.cpp.new + mv copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + touch -r copasi/lna/CLNAMethod.cpp copasi/lna/CLNAMethod.cpp.new + mv copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + touch -r copasi/lna/CLNAProblem.cpp copasi/lna/CLNAProblem.cpp.new + mv copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + touch -r copasi/lna/CLNATask.cpp copasi/lna/CLNATask.cpp.new + mv copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + touch -r copasi/lyap/CLyapMethod.cpp copasi/lyap/CLyapMethod.cpp.new + mv copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + touch -r copasi/lyap/CLyapProblem.cpp copasi/lyap/CLyapProblem.cpp.new + mv copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + touch -r copasi/lyap/CLyapTask.cpp copasi/lyap/CLyapTask.cpp.new + mv copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + touch -r copasi/lyap/CLyapWolfMethod.cpp copasi/lyap/CLyapWolfMethod.cpp.new + mv copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + touch -r copasi/math/CJitCompiler.cpp copasi/math/CJitCompiler.cpp.new + mv copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + touch -r copasi/math/CJitCompilerImplementation.cpp copasi/math/CJitCompilerImplementation.cpp.new + mv copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + touch -r copasi/math/CJitExpression.cpp copasi/math/CJitExpression.cpp.new + mv copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + touch -r copasi/math/CMathContainer.cpp copasi/math/CMathContainer.cpp.new + mv copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + touch -r copasi/math/CMathDelay.cpp copasi/math/CMathDelay.cpp.new + mv copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + touch -r copasi/math/CMathDependencyGraph.cpp copasi/math/CMathDependencyGraph.cpp.new + mv copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + touch -r copasi/math/CMathDependencyNode.cpp copasi/math/CMathDependencyNode.cpp.new + mv copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + touch -r copasi/math/CMathDependencyNodeIterator.cpp copasi/math/CMathDependencyNodeIterator.cpp.new + mv copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + touch -r copasi/math/CMathDerive.cpp copasi/math/CMathDerive.cpp.new + mv copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + touch -r copasi/math/CMathEnum.cpp copasi/math/CMathEnum.cpp.new + mv copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + touch -r copasi/math/CMathEvent.cpp copasi/math/CMathEvent.cpp.new + mv copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + touch -r copasi/math/CMathEventQueue.cpp copasi/math/CMathEventQueue.cpp.new + mv copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + touch -r copasi/math/CMathExpression.cpp copasi/math/CMathExpression.cpp.new + mv copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + touch -r copasi/math/CMathHistory.cpp copasi/math/CMathHistory.cpp.new + mv copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + touch -r copasi/math/CMathObject.cpp copasi/math/CMathObject.cpp.new + mv copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + touch -r copasi/math/CMathReaction.cpp copasi/math/CMathReaction.cpp.new + mv copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + touch -r copasi/math/CMathUpdateSequence.cpp copasi/math/CMathUpdateSequence.cpp.new + mv copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + touch -r copasi/miase/CMiaseBase.cpp copasi/miase/CMiaseBase.cpp.new + mv copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + touch -r copasi/miase/CMiaseML.cpp copasi/miase/CMiaseML.cpp.new + mv copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + touch -r copasi/miase/CMiaseModel.cpp copasi/miase/CMiaseModel.cpp.new + mv copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + touch -r copasi/miase/CMiaseOutput.cpp copasi/miase/CMiaseOutput.cpp.new + mv copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + touch -r copasi/miase/CMiaseParser.cpp copasi/miase/CMiaseParser.cpp.new + mv copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + touch -r copasi/miase/CMiaseSimulation.cpp copasi/miase/CMiaseSimulation.cpp.new + mv copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + touch -r copasi/miase/CMiaseTask.cpp copasi/miase/CMiaseTask.cpp.new + mv copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + touch -r copasi/model/CAnnotation.cpp copasi/model/CAnnotation.cpp.new + mv copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + touch -r copasi/model/CChemEq.cpp copasi/model/CChemEq.cpp.new + mv copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + touch -r copasi/model/CChemEqElement.cpp copasi/model/CChemEqElement.cpp.new + mv copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + touch -r copasi/model/CChemEqInterface.cpp copasi/model/CChemEqInterface.cpp.new + mv copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + touch -r copasi/model/CChemEqParser.cpp copasi/model/CChemEqParser.cpp.new + mv copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + touch -r copasi/model/CChemEqParser_lex.cpp copasi/model/CChemEqParser_lex.cpp.new + mv copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + touch -r copasi/model/CChemEqParser_yacc.cpp copasi/model/CChemEqParser_yacc.cpp.new + mv copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + touch -r copasi/model/CCompartment.cpp copasi/model/CCompartment.cpp.new + mv copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + touch -r copasi/model/CEvent.cpp copasi/model/CEvent.cpp.new + mv copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + touch -r copasi/model/CMMLOutput.cpp copasi/model/CMMLOutput.cpp.new + mv copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + touch -r copasi/model/CMetab.cpp copasi/model/CMetab.cpp.new + mv copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + touch -r copasi/model/CMetabNameInterface.cpp copasi/model/CMetabNameInterface.cpp.new + mv copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModel.cpp.new copasi/model/CModel.cpp + touch -r copasi/model/CModel.cpp copasi/model/CModel.cpp.new + mv copasi/model/CModel.cpp.new copasi/model/CModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + touch -r copasi/model/CModelAnalyzer.cpp copasi/model/CModelAnalyzer.cpp.new + mv copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + touch -r copasi/model/CModelExpansion.cpp copasi/model/CModelExpansion.cpp.new + mv copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + touch -r copasi/model/CModelMerging.cpp copasi/model/CModelMerging.cpp.new + mv copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + touch -r copasi/model/CModelParameter.cpp copasi/model/CModelParameter.cpp.new + mv copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + touch -r copasi/model/CModelParameterGroup.cpp copasi/model/CModelParameterGroup.cpp.new + mv copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + touch -r copasi/model/CModelParameterSet.cpp copasi/model/CModelParameterSet.cpp.new + mv copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + touch -r copasi/model/CModelValue.cpp copasi/model/CModelValue.cpp.new + mv copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + touch -r copasi/model/CMoiety.cpp copasi/model/CMoiety.cpp.new + mv copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + touch -r copasi/model/CObjectLists.cpp copasi/model/CObjectLists.cpp.new + mv copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + touch -r copasi/model/CReaction.cpp copasi/model/CReaction.cpp.new + mv copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + touch -r copasi/model/CReactionInterface.cpp copasi/model/CReactionInterface.cpp.new + mv copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CState.cpp.new copasi/model/CState.cpp + touch -r copasi/model/CState.cpp copasi/model/CState.cpp.new + mv copasi/model/CState.cpp.new copasi/model/CState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + touch -r copasi/moieties/CMoietiesMethod.cpp copasi/moieties/CMoietiesMethod.cpp.new + mv copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + touch -r copasi/moieties/CMoietiesProblem.cpp copasi/moieties/CMoietiesProblem.cpp.new + mv copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + touch -r copasi/moieties/CMoietiesTask.cpp copasi/moieties/CMoietiesTask.cpp.new + mv copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + touch -r copasi/odepack++/CInternalSolver.cpp copasi/odepack++/CInternalSolver.cpp.new + mv copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + touch -r copasi/odepack++/CLSODA.cpp copasi/odepack++/CLSODA.cpp.new + mv copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + touch -r copasi/odepack++/CLSODAR.cpp copasi/odepack++/CLSODAR.cpp.new + mv copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + touch -r copasi/odepack++/CRadau5.cpp copasi/odepack++/CRadau5.cpp.new + mv copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + touch -r copasi/odepack++/Cxerrwd.cpp copasi/odepack++/Cxerrwd.cpp.new + mv copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + touch -r copasi/odepack++/common.cpp copasi/odepack++/common.cpp.new + mv copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + touch -r copasi/odepack++/dbnorm.cpp copasi/odepack++/dbnorm.cpp.new + mv copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + touch -r copasi/odepack++/dc_decsol.cpp copasi/odepack++/dc_decsol.cpp.new + mv copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + touch -r copasi/odepack++/dcfode.cpp copasi/odepack++/dcfode.cpp.new + mv copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + touch -r copasi/odepack++/decsol.cpp copasi/odepack++/decsol.cpp.new + mv copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + touch -r copasi/odepack++/dewset.cpp copasi/odepack++/dewset.cpp.new + mv copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + touch -r copasi/odepack++/dfnorm.cpp copasi/odepack++/dfnorm.cpp.new + mv copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + touch -r copasi/odepack++/dintdy.cpp copasi/odepack++/dintdy.cpp.new + mv copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + touch -r copasi/odepack++/dmnorm.cpp copasi/odepack++/dmnorm.cpp.new + mv copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + touch -r copasi/odepack++/dprja.cpp copasi/odepack++/dprja.cpp.new + mv copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + touch -r copasi/odepack++/drcheck.cpp copasi/odepack++/drcheck.cpp.new + mv copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + touch -r copasi/odepack++/dsolsy.cpp copasi/odepack++/dsolsy.cpp.new + mv copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + touch -r copasi/odepack++/dstoda.cpp copasi/odepack++/dstoda.cpp.new + mv copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + touch -r copasi/optimization/CNL2SOL.cpp copasi/optimization/CNL2SOL.cpp.new + mv copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + touch -r copasi/optimization/COptItem.cpp copasi/optimization/COptItem.cpp.new + mv copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + touch -r copasi/optimization/COptLog.cpp copasi/optimization/COptLog.cpp.new + mv copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + touch -r copasi/optimization/COptLogEntry.cpp copasi/optimization/COptLogEntry.cpp.new + mv copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + touch -r copasi/optimization/COptLogItem.cpp copasi/optimization/COptLogItem.cpp.new + mv copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + touch -r copasi/optimization/COptMethod.cpp copasi/optimization/COptMethod.cpp.new + mv copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + touch -r copasi/optimization/COptMethodCoranaWalk.cpp copasi/optimization/COptMethodCoranaWalk.cpp.new + mv copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + touch -r copasi/optimization/COptMethodDE.cpp copasi/optimization/COptMethodDE.cpp.new + mv copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + touch -r copasi/optimization/COptMethodEP.cpp copasi/optimization/COptMethodEP.cpp.new + mv copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + touch -r copasi/optimization/COptMethodGA.cpp copasi/optimization/COptMethodGA.cpp.new + mv copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + touch -r copasi/optimization/COptMethodGASR.cpp copasi/optimization/COptMethodGASR.cpp.new + mv copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + touch -r copasi/optimization/COptMethodHookeJeeves.cpp copasi/optimization/COptMethodHookeJeeves.cpp.new + mv copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + touch -r copasi/optimization/COptMethodLevenbergMarquardt.cpp copasi/optimization/COptMethodLevenbergMarquardt.cpp.new + mv copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + touch -r copasi/optimization/COptMethodNL2SOL.cpp copasi/optimization/COptMethodNL2SOL.cpp.new + mv copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + touch -r copasi/optimization/COptMethodNelderMead.cpp copasi/optimization/COptMethodNelderMead.cpp.new + mv copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + touch -r copasi/optimization/COptMethodPS.cpp copasi/optimization/COptMethodPS.cpp.new + mv copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + touch -r copasi/optimization/COptMethodPraxis.cpp copasi/optimization/COptMethodPraxis.cpp.new + mv copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + touch -r copasi/optimization/COptMethodSA.cpp copasi/optimization/COptMethodSA.cpp.new + mv copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + touch -r copasi/optimization/COptMethodSRES.cpp copasi/optimization/COptMethodSRES.cpp.new + mv copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + touch -r copasi/optimization/COptMethodSS.cpp copasi/optimization/COptMethodSS.cpp.new + mv copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + touch -r copasi/optimization/COptMethodStatistics.cpp copasi/optimization/COptMethodStatistics.cpp.new + mv copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + touch -r copasi/optimization/COptMethodSteepestDescent.cpp copasi/optimization/COptMethodSteepestDescent.cpp.new + mv copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + touch -r copasi/optimization/COptMethodTruncatedNewton.cpp copasi/optimization/COptMethodTruncatedNewton.cpp.new + mv copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + touch -r copasi/optimization/COptPopulationMethod.cpp copasi/optimization/COptPopulationMethod.cpp.new + mv copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + touch -r copasi/optimization/COptProblem.cpp copasi/optimization/COptProblem.cpp.new + mv copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + touch -r copasi/optimization/COptTask.cpp copasi/optimization/COptTask.cpp.new + mv copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + touch -r copasi/optimization/CPraxis.cpp copasi/optimization/CPraxis.cpp.new + mv copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + touch -r copasi/optimization/CRandomSearch.cpp copasi/optimization/CRandomSearch.cpp.new + mv copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + touch -r copasi/optimization/CRealProblem.cpp copasi/optimization/CRealProblem.cpp.new + mv copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + touch -r copasi/optimization/CTruncatedNewton.cpp copasi/optimization/CTruncatedNewton.cpp.new + mv copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + touch -r copasi/optimization/FminBrent.cpp copasi/optimization/FminBrent.cpp.new + mv copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + touch -r copasi/oscillation/COscillationMethod.cpp copasi/oscillation/COscillationMethod.cpp.new + mv copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + touch -r copasi/oscillation/COscillationMethodIntegrate.cpp copasi/oscillation/COscillationMethodIntegrate.cpp.new + mv copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + touch -r copasi/oscillation/COscillationProblem.cpp copasi/oscillation/COscillationProblem.cpp.new + mv copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + touch -r copasi/oscillation/COscillationTask.cpp copasi/oscillation/COscillationTask.cpp.new + mv copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + touch -r copasi/output/COutputHandler.cpp copasi/output/COutputHandler.cpp.new + mv copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + touch -r copasi/parameterFitting/CExperiment.cpp copasi/parameterFitting/CExperiment.cpp.new + mv copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + touch -r copasi/parameterFitting/CExperimentFileInfo.cpp copasi/parameterFitting/CExperimentFileInfo.cpp.new + mv copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + touch -r copasi/parameterFitting/CExperimentObjectMap.cpp copasi/parameterFitting/CExperimentObjectMap.cpp.new + mv copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + touch -r copasi/parameterFitting/CExperimentSet.cpp copasi/parameterFitting/CExperimentSet.cpp.new + mv copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + touch -r copasi/parameterFitting/CFitItem.cpp copasi/parameterFitting/CFitItem.cpp.new + mv copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + touch -r copasi/parameterFitting/CFitProblem.cpp copasi/parameterFitting/CFitProblem.cpp.new + mv copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + touch -r copasi/parameterFitting/CFitTask.cpp copasi/parameterFitting/CFitTask.cpp.new + mv copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + touch -r copasi/plot/COutputDefinitionVector.cpp copasi/plot/COutputDefinitionVector.cpp.new + mv copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + touch -r copasi/plot/CPlotColors.cpp copasi/plot/CPlotColors.cpp.new + mv copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + touch -r copasi/plot/CPlotItem.cpp copasi/plot/CPlotItem.cpp.new + mv copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + touch -r copasi/plot/CPlotSpecification.cpp copasi/plot/CPlotSpecification.cpp.new + mv copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + touch -r copasi/plotUI/BandedGraphWidget.cpp copasi/plotUI/BandedGraphWidget.cpp.new + mv copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + touch -r copasi/plotUI/C2DCurveData.cpp copasi/plotUI/C2DCurveData.cpp.new + mv copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + touch -r copasi/plotUI/C2DPlotCurve.cpp copasi/plotUI/C2DPlotCurve.cpp.new + mv copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + touch -r copasi/plotUI/CBandedGraphData.cpp copasi/plotUI/CBandedGraphData.cpp.new + mv copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + touch -r copasi/plotUI/CHistoCurveData.cpp copasi/plotUI/CHistoCurveData.cpp.new + mv copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + touch -r copasi/plotUI/CLinearColorMap.cpp copasi/plotUI/CLinearColorMap.cpp.new + mv copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + touch -r copasi/plotUI/COutputHandlerPlot.cpp copasi/plotUI/COutputHandlerPlot.cpp.new + mv copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + touch -r copasi/plotUI/CPlotInterface.cpp copasi/plotUI/CPlotInterface.cpp.new + mv copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + touch -r copasi/plotUI/CPlotSpectogram.cpp copasi/plotUI/CPlotSpectogram.cpp.new + mv copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + touch -r copasi/plotUI/CQAdvancedPlotSettings.cpp copasi/plotUI/CQAdvancedPlotSettings.cpp.new + mv copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + touch -r copasi/plotUI/CQCustomPlot.cpp copasi/plotUI/CQCustomPlot.cpp.new + mv copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + touch -r copasi/plotUI/CQDataVizPlot.cpp copasi/plotUI/CQDataVizPlot.cpp.new + mv copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + touch -r copasi/plotUI/CQExtender.cpp copasi/plotUI/CQExtender.cpp.new + mv copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + touch -r copasi/plotUI/CQMarchingSquares.cpp copasi/plotUI/CQMarchingSquares.cpp.new + mv copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + touch -r copasi/plotUI/CQPlotColors.cpp copasi/plotUI/CQPlotColors.cpp.new + mv copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + touch -r copasi/plotUI/CQPlotEditWidget.cpp copasi/plotUI/CQPlotEditWidget.cpp.new + mv copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + touch -r copasi/plotUI/CQPlotSubwidget.cpp copasi/plotUI/CQPlotSubwidget.cpp.new + mv copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + touch -r copasi/plotUI/CQSpectogramWidget.cpp copasi/plotUI/CQSpectogramWidget.cpp.new + mv copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + touch -r copasi/plotUI/CQtChartsPlot.cpp copasi/plotUI/CQtChartsPlot.cpp.new + mv copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + touch -r copasi/plotUI/CQwtPlot.cpp copasi/plotUI/CQwtPlot.cpp.new + mv copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + touch -r copasi/plotUI/CSpectorgramData.cpp copasi/plotUI/CSpectorgramData.cpp.new + mv copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + touch -r copasi/plotUI/HistoWidget.cpp copasi/plotUI/HistoWidget.cpp.new + mv copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + touch -r copasi/plotUI/curve2dwidget.cpp copasi/plotUI/curve2dwidget.cpp.new + mv copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + touch -r copasi/plotUI/plotwindow.cpp copasi/plotUI/plotwindow.cpp.new + mv copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + touch -r copasi/plotUI/scrollbar.cpp copasi/plotUI/scrollbar.cpp.new + mv copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + touch -r copasi/plotUI/scrollzoomer.cpp copasi/plotUI/scrollzoomer.cpp.new + mv copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + touch -r copasi/pvmtest/pvmtest.cpp copasi/pvmtest/pvmtest.cpp.new + mv copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + touch -r copasi/qlayout/CQAnimationControls.cpp copasi/qlayout/CQAnimationControls.cpp.new + mv copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + touch -r copasi/qlayout/CQAnimationSettingsEditor.cpp copasi/qlayout/CQAnimationSettingsEditor.cpp.new + mv copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + touch -r copasi/qlayout/CQAnimationWindow.cpp copasi/qlayout/CQAnimationWindow.cpp.new + mv copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + touch -r copasi/qlayout/CQConnectionGraphicsItem.cpp copasi/qlayout/CQConnectionGraphicsItem.cpp.new + mv copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + touch -r copasi/qlayout/CQCopasiAnimation.cpp copasi/qlayout/CQCopasiAnimation.cpp.new + mv copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + touch -r copasi/qlayout/CQCopasiEffect.cpp copasi/qlayout/CQCopasiEffect.cpp.new + mv copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + touch -r copasi/qlayout/CQCopasiGraphicsItem.cpp copasi/qlayout/CQCopasiGraphicsItem.cpp.new + mv copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + touch -r copasi/qlayout/CQEffectDescription.cpp copasi/qlayout/CQEffectDescription.cpp.new + mv copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + touch -r copasi/qlayout/CQEffectDescriptionEdit.cpp copasi/qlayout/CQEffectDescriptionEdit.cpp.new + mv copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + touch -r copasi/qlayout/CQElementProperties.cpp copasi/qlayout/CQElementProperties.cpp.new + mv copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + touch -r copasi/qlayout/CQLabelGraphicsItem.cpp copasi/qlayout/CQLabelGraphicsItem.cpp.new + mv copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + touch -r copasi/qlayout/CQLayoutScene.cpp copasi/qlayout/CQLayoutScene.cpp.new + mv copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + touch -r copasi/qlayout/CQLayoutView.cpp copasi/qlayout/CQLayoutView.cpp.new + mv copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + touch -r copasi/qlayout/CQRenderConverter.cpp copasi/qlayout/CQRenderConverter.cpp.new + mv copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + touch -r copasi/qlayout/CQRoundedRect.cpp copasi/qlayout/CQRoundedRect.cpp.new + mv copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + touch -r copasi/qlayout/CQStyledGraphicsItem.cpp copasi/qlayout/CQStyledGraphicsItem.cpp.new + mv copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + touch -r copasi/qlayout/CQZoomableView.cpp copasi/qlayout/CQZoomableView.cpp.new + mv copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + touch -r copasi/randomGenerator/CPermutation.cpp copasi/randomGenerator/CPermutation.cpp.new + mv copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + touch -r copasi/randomGenerator/CRandom.cpp copasi/randomGenerator/CRandom.cpp.new + mv copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + touch -r copasi/randomGenerator/Cmt19937.cpp copasi/randomGenerator/Cmt19937.cpp.new + mv copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + touch -r copasi/randomGenerator/Cr250.cpp copasi/randomGenerator/Cr250.cpp.new + mv copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + touch -r copasi/report/CDataHandler.cpp copasi/report/CDataHandler.cpp.new + mv copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + touch -r copasi/report/CKeyFactory.cpp copasi/report/CKeyFactory.cpp.new + mv copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + touch -r copasi/report/COutputAssistant.cpp copasi/report/COutputAssistant.cpp.new + mv copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReport.cpp.new copasi/report/CReport.cpp + touch -r copasi/report/CReport.cpp copasi/report/CReport.cpp.new + mv copasi/report/CReport.cpp.new copasi/report/CReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + touch -r copasi/report/CReportBody.cpp copasi/report/CReportBody.cpp.new + mv copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + touch -r copasi/report/CReportDefinition.cpp copasi/report/CReportDefinition.cpp.new + mv copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + touch -r copasi/report/CReportDefinitionVector.cpp copasi/report/CReportDefinitionVector.cpp.new + mv copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + touch -r copasi/resourcesUI/CQIconResource.cpp copasi/resourcesUI/CQIconResource.cpp.new + mv copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + touch -r copasi/sbml/CCellDesignerImporter.cpp copasi/sbml/CCellDesignerImporter.cpp.new + mv copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + touch -r copasi/sbml/CSBMLExporter.cpp copasi/sbml/CSBMLExporter.cpp.new + mv copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + touch -r copasi/sbml/ConverterASTNode.cpp copasi/sbml/ConverterASTNode.cpp.new + mv copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + touch -r copasi/sbml/SBMLImporter.cpp copasi/sbml/SBMLImporter.cpp.new + mv copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + touch -r copasi/sbml/SBMLIncompatibility.cpp copasi/sbml/SBMLIncompatibility.cpp.new + mv copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + touch -r copasi/sbml/SBMLReference.cpp copasi/sbml/SBMLReference.cpp.new + mv copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + touch -r copasi/sbml/SBMLUnitSupport.cpp copasi/sbml/SBMLUnitSupport.cpp.new + mv copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + touch -r copasi/sbml/SBMLUtils.cpp copasi/sbml/SBMLUtils.cpp.new + mv copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + touch -r copasi/sbml/StdException.cpp copasi/sbml/StdException.cpp.new + mv copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + touch -r copasi/sbml/unittests/test.cpp copasi/sbml/unittests/test.cpp.new + mv copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + touch -r copasi/sbml/unittests/test000001.cpp copasi/sbml/unittests/test000001.cpp.new + mv copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + touch -r copasi/sbml/unittests/test000002.cpp copasi/sbml/unittests/test000002.cpp.new + mv copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + touch -r copasi/sbml/unittests/test000003.cpp copasi/sbml/unittests/test000003.cpp.new + mv copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + touch -r copasi/sbml/unittests/test000004.cpp copasi/sbml/unittests/test000004.cpp.new + mv copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + touch -r copasi/sbml/unittests/test000005.cpp copasi/sbml/unittests/test000005.cpp.new + mv copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + touch -r copasi/sbml/unittests/test000006.cpp copasi/sbml/unittests/test000006.cpp.new + mv copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + touch -r copasi/sbml/unittests/test000007.cpp copasi/sbml/unittests/test000007.cpp.new + mv copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + touch -r copasi/sbml/unittests/test000008.cpp copasi/sbml/unittests/test000008.cpp.new + mv copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + touch -r copasi/sbml/unittests/test000009.cpp copasi/sbml/unittests/test000009.cpp.new + mv copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + touch -r copasi/sbml/unittests/test000010.cpp copasi/sbml/unittests/test000010.cpp.new + mv copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + touch -r copasi/sbml/unittests/test000011.cpp copasi/sbml/unittests/test000011.cpp.new + mv copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + touch -r copasi/sbml/unittests/test000012.cpp copasi/sbml/unittests/test000012.cpp.new + mv copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + touch -r copasi/sbml/unittests/test000013.cpp copasi/sbml/unittests/test000013.cpp.new + mv copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + touch -r copasi/sbml/unittests/test000014.cpp copasi/sbml/unittests/test000014.cpp.new + mv copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + touch -r copasi/sbml/unittests/test000015.cpp copasi/sbml/unittests/test000015.cpp.new + mv copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + touch -r copasi/sbml/unittests/test000016.cpp copasi/sbml/unittests/test000016.cpp.new + mv copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + touch -r copasi/sbml/unittests/test000017.cpp copasi/sbml/unittests/test000017.cpp.new + mv copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + touch -r copasi/sbml/unittests/test000018.cpp copasi/sbml/unittests/test000018.cpp.new + mv copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + touch -r copasi/sbml/unittests/test000019.cpp copasi/sbml/unittests/test000019.cpp.new + mv copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + touch -r copasi/sbml/unittests/test000020.cpp copasi/sbml/unittests/test000020.cpp.new + mv copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + touch -r copasi/sbml/unittests/test000021.cpp copasi/sbml/unittests/test000021.cpp.new + mv copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + touch -r copasi/sbml/unittests/test000022.cpp copasi/sbml/unittests/test000022.cpp.new + mv copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + touch -r copasi/sbml/unittests/test000023.cpp copasi/sbml/unittests/test000023.cpp.new + mv copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + touch -r copasi/sbml/unittests/test000024.cpp copasi/sbml/unittests/test000024.cpp.new + mv copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + touch -r copasi/sbml/unittests/test000025.cpp copasi/sbml/unittests/test000025.cpp.new + mv copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + touch -r copasi/sbml/unittests/test000026.cpp copasi/sbml/unittests/test000026.cpp.new + mv copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + touch -r copasi/sbml/unittests/test000027.cpp copasi/sbml/unittests/test000027.cpp.new + mv copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + touch -r copasi/sbml/unittests/test000028.cpp copasi/sbml/unittests/test000028.cpp.new + mv copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + touch -r copasi/sbml/unittests/test000029.cpp copasi/sbml/unittests/test000029.cpp.new + mv copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + touch -r copasi/sbml/unittests/test000030.cpp copasi/sbml/unittests/test000030.cpp.new + mv copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + touch -r copasi/sbml/unittests/test000031.cpp copasi/sbml/unittests/test000031.cpp.new + mv copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + touch -r copasi/sbml/unittests/test000032.cpp copasi/sbml/unittests/test000032.cpp.new + mv copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + touch -r copasi/sbml/unittests/test000033.cpp copasi/sbml/unittests/test000033.cpp.new + mv copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + touch -r copasi/sbml/unittests/test000034.cpp copasi/sbml/unittests/test000034.cpp.new + mv copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + touch -r copasi/sbml/unittests/test000035.cpp copasi/sbml/unittests/test000035.cpp.new + mv copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + touch -r copasi/sbml/unittests/test000036.cpp copasi/sbml/unittests/test000036.cpp.new + mv copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + touch -r copasi/sbml/unittests/test000037.cpp copasi/sbml/unittests/test000037.cpp.new + mv copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + touch -r copasi/sbml/unittests/test000038.cpp copasi/sbml/unittests/test000038.cpp.new + mv copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + touch -r copasi/sbml/unittests/test000039.cpp copasi/sbml/unittests/test000039.cpp.new + mv copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + touch -r copasi/sbml/unittests/test000040.cpp copasi/sbml/unittests/test000040.cpp.new + mv copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + touch -r copasi/sbml/unittests/test000041.cpp copasi/sbml/unittests/test000041.cpp.new + mv copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + touch -r copasi/sbml/unittests/test000042.cpp copasi/sbml/unittests/test000042.cpp.new + mv copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + touch -r copasi/sbml/unittests/test000043.cpp copasi/sbml/unittests/test000043.cpp.new + mv copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + touch -r copasi/sbml/unittests/test000044.cpp copasi/sbml/unittests/test000044.cpp.new + mv copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + touch -r copasi/sbml/unittests/test000045.cpp copasi/sbml/unittests/test000045.cpp.new + mv copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + touch -r copasi/sbml/unittests/test000046.cpp copasi/sbml/unittests/test000046.cpp.new + mv copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + touch -r copasi/sbml/unittests/test000047.cpp copasi/sbml/unittests/test000047.cpp.new + mv copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + touch -r copasi/sbml/unittests/test000048.cpp copasi/sbml/unittests/test000048.cpp.new + mv copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + touch -r copasi/sbml/unittests/test000049.cpp copasi/sbml/unittests/test000049.cpp.new + mv copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + touch -r copasi/sbml/unittests/test000050.cpp copasi/sbml/unittests/test000050.cpp.new + mv copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + touch -r copasi/sbml/unittests/test000051.cpp copasi/sbml/unittests/test000051.cpp.new + mv copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + touch -r copasi/sbml/unittests/test000052.cpp copasi/sbml/unittests/test000052.cpp.new + mv copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + touch -r copasi/sbml/unittests/test000053.cpp copasi/sbml/unittests/test000053.cpp.new + mv copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + touch -r copasi/sbml/unittests/test000054.cpp copasi/sbml/unittests/test000054.cpp.new + mv copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + touch -r copasi/sbml/unittests/test000055.cpp copasi/sbml/unittests/test000055.cpp.new + mv copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + touch -r copasi/sbml/unittests/test000056.cpp copasi/sbml/unittests/test000056.cpp.new + mv copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + touch -r copasi/sbml/unittests/test000057.cpp copasi/sbml/unittests/test000057.cpp.new + mv copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + touch -r copasi/sbml/unittests/test000058.cpp copasi/sbml/unittests/test000058.cpp.new + mv copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + touch -r copasi/sbml/unittests/test000059.cpp copasi/sbml/unittests/test000059.cpp.new + mv copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + touch -r copasi/sbml/unittests/test000060.cpp copasi/sbml/unittests/test000060.cpp.new + mv copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + touch -r copasi/sbml/unittests/test000061.cpp copasi/sbml/unittests/test000061.cpp.new + mv copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + touch -r copasi/sbml/unittests/test000062.cpp copasi/sbml/unittests/test000062.cpp.new + mv copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + touch -r copasi/sbml/unittests/test000063.cpp copasi/sbml/unittests/test000063.cpp.new + mv copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + touch -r copasi/sbml/unittests/test000064.cpp copasi/sbml/unittests/test000064.cpp.new + mv copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + touch -r copasi/sbml/unittests/test000065.cpp copasi/sbml/unittests/test000065.cpp.new + mv copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + touch -r copasi/sbml/unittests/test000066.cpp copasi/sbml/unittests/test000066.cpp.new + mv copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + touch -r copasi/sbml/unittests/test000067.cpp copasi/sbml/unittests/test000067.cpp.new + mv copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + touch -r copasi/sbml/unittests/test000068.cpp copasi/sbml/unittests/test000068.cpp.new + mv copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + touch -r copasi/sbml/unittests/test000069.cpp copasi/sbml/unittests/test000069.cpp.new + mv copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + touch -r copasi/sbml/unittests/test000070.cpp copasi/sbml/unittests/test000070.cpp.new + mv copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + touch -r copasi/sbml/unittests/test000071.cpp copasi/sbml/unittests/test000071.cpp.new + mv copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + touch -r copasi/sbml/unittests/test000072.cpp copasi/sbml/unittests/test000072.cpp.new + mv copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + touch -r copasi/sbml/unittests/test000073.cpp copasi/sbml/unittests/test000073.cpp.new + mv copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + touch -r copasi/sbml/unittests/test000074.cpp copasi/sbml/unittests/test000074.cpp.new + mv copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + touch -r copasi/sbml/unittests/test000075.cpp copasi/sbml/unittests/test000075.cpp.new + mv copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + touch -r copasi/sbml/unittests/test000076.cpp copasi/sbml/unittests/test000076.cpp.new + mv copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + touch -r copasi/sbml/unittests/test000077.cpp copasi/sbml/unittests/test000077.cpp.new + mv copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + touch -r copasi/sbml/unittests/test000078.cpp copasi/sbml/unittests/test000078.cpp.new + mv copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + touch -r copasi/sbml/unittests/test000079.cpp copasi/sbml/unittests/test000079.cpp.new + mv copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + touch -r copasi/sbml/unittests/test000080.cpp copasi/sbml/unittests/test000080.cpp.new + mv copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + touch -r copasi/sbml/unittests/test000081.cpp copasi/sbml/unittests/test000081.cpp.new + mv copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + touch -r copasi/sbml/unittests/test000082.cpp copasi/sbml/unittests/test000082.cpp.new + mv copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + touch -r copasi/sbml/unittests/test000083.cpp copasi/sbml/unittests/test000083.cpp.new + mv copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + touch -r copasi/sbml/unittests/test000084.cpp copasi/sbml/unittests/test000084.cpp.new + mv copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + touch -r copasi/sbml/unittests/test000085.cpp copasi/sbml/unittests/test000085.cpp.new + mv copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + touch -r copasi/sbml/unittests/test000086.cpp copasi/sbml/unittests/test000086.cpp.new + mv copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + touch -r copasi/sbml/unittests/test000087.cpp copasi/sbml/unittests/test000087.cpp.new + mv copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + touch -r copasi/sbml/unittests/test000088.cpp copasi/sbml/unittests/test000088.cpp.new + mv copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + touch -r copasi/sbml/unittests/test000089.cpp copasi/sbml/unittests/test000089.cpp.new + mv copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + touch -r copasi/sbml/unittests/test000090.cpp copasi/sbml/unittests/test000090.cpp.new + mv copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + touch -r copasi/sbml/unittests/test000091.cpp copasi/sbml/unittests/test000091.cpp.new + mv copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + touch -r copasi/sbml/unittests/test000092.cpp copasi/sbml/unittests/test000092.cpp.new + mv copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + touch -r copasi/sbml/unittests/test000093.cpp copasi/sbml/unittests/test000093.cpp.new + mv copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + touch -r copasi/sbml/unittests/test000094.cpp copasi/sbml/unittests/test000094.cpp.new + mv copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + touch -r copasi/sbml/unittests/test000095.cpp copasi/sbml/unittests/test000095.cpp.new + mv copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + touch -r copasi/sbml/unittests/test000096.cpp copasi/sbml/unittests/test000096.cpp.new + mv copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + touch -r copasi/sbml/unittests/test000097.cpp copasi/sbml/unittests/test000097.cpp.new + mv copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + touch -r copasi/sbml/unittests/test000098.cpp copasi/sbml/unittests/test000098.cpp.new + mv copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + touch -r copasi/sbml/unittests/test000099.cpp copasi/sbml/unittests/test000099.cpp.new + mv copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + touch -r copasi/sbml/unittests/test000100.cpp copasi/sbml/unittests/test000100.cpp.new + mv copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + touch -r copasi/sbml/unittests/test000101.cpp copasi/sbml/unittests/test000101.cpp.new + mv copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + touch -r copasi/sbml/unittests/test000102.cpp copasi/sbml/unittests/test000102.cpp.new + mv copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + touch -r copasi/sbml/unittests/test000103.cpp copasi/sbml/unittests/test000103.cpp.new + mv copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + touch -r copasi/sbml/unittests/test000104.cpp copasi/sbml/unittests/test000104.cpp.new + mv copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + touch -r copasi/sbml/unittests/utilities.cpp copasi/sbml/unittests/utilities.cpp.new + mv copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + touch -r copasi/sbmlunit/CSBMLunit.cpp copasi/sbmlunit/CSBMLunit.cpp.new + mv copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + touch -r copasi/sbmlunit/CSBMLunitInterface.cpp copasi/sbmlunit/CSBMLunitInterface.cpp.new + mv copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + touch -r copasi/sbmlunit/Expression2PresentationMML.cpp copasi/sbmlunit/Expression2PresentationMML.cpp.new + mv copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + touch -r copasi/sbmlunit/Expression2PresentationMMLUnits.cpp copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new + mv copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + touch -r copasi/scan/CScanMethod.cpp copasi/scan/CScanMethod.cpp.new + mv copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + touch -r copasi/scan/CScanProblem.cpp copasi/scan/CScanProblem.cpp.new + mv copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + touch -r copasi/scan/CScanTask.cpp copasi/scan/CScanTask.cpp.new + mv copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + touch -r copasi/sedml/CSEDMLExporter.cpp copasi/sedml/CSEDMLExporter.cpp.new + mv copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + touch -r copasi/sedml/SEDMLImporter.cpp copasi/sedml/SEDMLImporter.cpp.new + mv copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + touch -r copasi/sedml/SEDMLUtils.cpp copasi/sedml/SEDMLUtils.cpp.new + mv copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + touch -r copasi/sensitivities/CSensMethod.cpp copasi/sensitivities/CSensMethod.cpp.new + mv copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + touch -r copasi/sensitivities/CSensProblem.cpp copasi/sensitivities/CSensProblem.cpp.new + mv copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + touch -r copasi/sensitivities/CSensTask.cpp copasi/sensitivities/CSensTask.cpp.new + mv copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + touch -r copasi/steadystate/CEigen.cpp copasi/steadystate/CEigen.cpp.new + mv copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + touch -r copasi/steadystate/CMCAMethod.cpp copasi/steadystate/CMCAMethod.cpp.new + mv copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + touch -r copasi/steadystate/CMCAProblem.cpp copasi/steadystate/CMCAProblem.cpp.new + mv copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + touch -r copasi/steadystate/CMCATask.cpp copasi/steadystate/CMCATask.cpp.new + mv copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + touch -r copasi/steadystate/CNewtonMethod.cpp copasi/steadystate/CNewtonMethod.cpp.new + mv copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + touch -r copasi/steadystate/CSteadyStateMethod.cpp copasi/steadystate/CSteadyStateMethod.cpp.new + mv copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + touch -r copasi/steadystate/CSteadyStateProblem.cpp copasi/steadystate/CSteadyStateProblem.cpp.new + mv copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + touch -r copasi/steadystate/CSteadyStateTask.cpp copasi/steadystate/CSteadyStateTask.cpp.new + mv copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test/test.cpp.new copasi/test/test.cpp + touch -r copasi/test/test.cpp copasi/test/test.cpp.new + mv copasi/test/test.cpp.new copasi/test/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + touch -r copasi/test2/CNormalFraction.cpp copasi/test2/CNormalFraction.cpp.new + mv copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + touch -r copasi/test2/CNormalItem.cpp copasi/test2/CNormalItem.cpp.new + mv copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + touch -r copasi/test2/CNormalItemPower.cpp copasi/test2/CNormalItemPower.cpp.new + mv copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + touch -r copasi/test2/CNormalLcm.cpp copasi/test2/CNormalLcm.cpp.new + mv copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + touch -r copasi/test2/CNormalProduct.cpp copasi/test2/CNormalProduct.cpp.new + mv copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + touch -r copasi/test2/CNormalSum.cpp copasi/test2/CNormalSum.cpp.new + mv copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + touch -r copasi/test2/CNormalTranslation.cpp copasi/test2/CNormalTranslation.cpp.new + mv copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/test.cpp.new copasi/test2/test.cpp + touch -r copasi/test2/test.cpp copasi/test2/test.cpp.new + mv copasi/test2/test.cpp.new copasi/test2/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + touch -r copasi/tex/CMathMLToTeX.cpp copasi/tex/CMathMLToTeX.cpp.new + mv copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + touch -r copasi/tex/CStructureParser.cpp copasi/tex/CStructureParser.cpp.new + mv copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + touch -r copasi/timesens/CTimeSensLsodaMethod.cpp copasi/timesens/CTimeSensLsodaMethod.cpp.new + mv copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + touch -r copasi/timesens/CTimeSensMethod.cpp copasi/timesens/CTimeSensMethod.cpp.new + mv copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + touch -r copasi/timesens/CTimeSensProblem.cpp copasi/timesens/CTimeSensProblem.cpp.new + mv copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + touch -r copasi/timesens/CTimeSensTask.cpp copasi/timesens/CTimeSensTask.cpp.new + mv copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + touch -r copasi/trajectory/CHybridMethod.cpp copasi/trajectory/CHybridMethod.cpp.new + mv copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + touch -r copasi/trajectory/CHybridMethodODE45.cpp copasi/trajectory/CHybridMethodODE45.cpp.new + mv copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionLSODAMethod.cpp copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionRKMethod.cpp copasi/trajectory/CHybridNextReactionRKMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + touch -r copasi/trajectory/CLsodaMethod.cpp copasi/trajectory/CLsodaMethod.cpp.new + mv copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + touch -r copasi/trajectory/CLsodaMethod2.cpp copasi/trajectory/CLsodaMethod2.cpp.new + mv copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + touch -r copasi/trajectory/CRadau5Method.cpp copasi/trajectory/CRadau5Method.cpp.new + mv copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + touch -r copasi/trajectory/CRootFinder.cpp copasi/trajectory/CRootFinder.cpp.new + mv copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + touch -r copasi/trajectory/CRungeKutta.cpp copasi/trajectory/CRungeKutta.cpp.new + mv copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + touch -r copasi/trajectory/CStochDirectMethod.cpp copasi/trajectory/CStochDirectMethod.cpp.new + mv copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + touch -r copasi/trajectory/CStochMethod.cpp copasi/trajectory/CStochMethod.cpp.new + mv copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + touch -r copasi/trajectory/CStochNextReactionMethod.cpp copasi/trajectory/CStochNextReactionMethod.cpp.new + mv copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + touch -r copasi/trajectory/CStochasticRungeKuttaRI5.cpp copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new + mv copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + touch -r copasi/trajectory/CTauLeapMethod.cpp copasi/trajectory/CTauLeapMethod.cpp.new + mv copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + touch -r copasi/trajectory/CTimeSeries.cpp copasi/trajectory/CTimeSeries.cpp.new + mv copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + touch -r copasi/trajectory/CTrajAdaptiveSA.cpp copasi/trajectory/CTrajAdaptiveSA.cpp.new + mv copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + touch -r copasi/trajectory/CTrajectoryMethod.cpp copasi/trajectory/CTrajectoryMethod.cpp.new + mv copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + touch -r copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new + mv copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + touch -r copasi/trajectory/CTrajectoryProblem.cpp copasi/trajectory/CTrajectoryProblem.cpp.new + mv copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + touch -r copasi/trajectory/CTrajectoryTask.cpp copasi/trajectory/CTrajectoryTask.cpp.new + mv copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + touch -r copasi/tss/CODEExporter.cpp copasi/tss/CODEExporter.cpp.new + mv copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + touch -r copasi/tss/CODEExporterBM.cpp copasi/tss/CODEExporterBM.cpp.new + mv copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + touch -r copasi/tss/CODEExporterC.cpp copasi/tss/CODEExporterC.cpp.new + mv copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + touch -r copasi/tss/CODEExporterXPPAUT.cpp copasi/tss/CODEExporterXPPAUT.cpp.new + mv copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + touch -r copasi/tssanalysis/CCSPMethod.cpp copasi/tssanalysis/CCSPMethod.cpp.new + mv copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + touch -r copasi/tssanalysis/CILDMMethod.cpp copasi/tssanalysis/CILDMMethod.cpp.new + mv copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + touch -r copasi/tssanalysis/CILDMModifiedMethod.cpp copasi/tssanalysis/CILDMModifiedMethod.cpp.new + mv copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + touch -r copasi/tssanalysis/CTSSAMethod.cpp copasi/tssanalysis/CTSSAMethod.cpp.new + mv copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + touch -r copasi/tssanalysis/CTSSAProblem.cpp copasi/tssanalysis/CTSSAProblem.cpp.new + mv copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + touch -r copasi/tssanalysis/CTSSATask.cpp copasi/tssanalysis/CTSSATask.cpp.new + mv copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CData.cpp.new copasi/undo/CData.cpp + touch -r copasi/undo/CData.cpp copasi/undo/CData.cpp.new + mv copasi/undo/CData.cpp.new copasi/undo/CData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + touch -r copasi/undo/CDataValue.cpp copasi/undo/CDataValue.cpp.new + mv copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + touch -r copasi/undo/CUndoData.cpp copasi/undo/CUndoData.cpp.new + mv copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + touch -r copasi/undo/CUndoObjectInterface.cpp copasi/undo/CUndoObjectInterface.cpp.new + mv copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + touch -r copasi/undo/CUndoStack.cpp copasi/undo/CUndoStack.cpp.new + mv copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + touch -r copasi/undoUI/CQUndoDM.cpp copasi/undoUI/CQUndoDM.cpp.new + mv copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + touch -r copasi/undoUI/CQUndoDialog.cpp copasi/undoUI/CQUndoDialog.cpp.new + mv copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + touch -r copasi/utilities/CBaseUnit.cpp copasi/utilities/CBaseUnit.cpp.new + mv copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + touch -r copasi/utilities/CBrent.cpp copasi/utilities/CBrent.cpp.new + mv copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + touch -r copasi/utilities/CCopasiException.cpp copasi/utilities/CCopasiException.cpp.new + mv copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + touch -r copasi/utilities/CCopasiMessage.cpp copasi/utilities/CCopasiMessage.cpp.new + mv copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + touch -r copasi/utilities/CCopasiMethod.cpp copasi/utilities/CCopasiMethod.cpp.new + mv copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + touch -r copasi/utilities/CCopasiParameter.cpp copasi/utilities/CCopasiParameter.cpp.new + mv copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + touch -r copasi/utilities/CCopasiParameterGroup.cpp copasi/utilities/CCopasiParameterGroup.cpp.new + mv copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + touch -r copasi/utilities/CCopasiProblem.cpp copasi/utilities/CCopasiProblem.cpp.new + mv copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + touch -r copasi/utilities/CCopasiTask.cpp copasi/utilities/CCopasiTask.cpp.new + mv copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + touch -r copasi/utilities/CCopasiTaskStatus.cpp copasi/utilities/CCopasiTaskStatus.cpp.new + mv copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + touch -r copasi/utilities/CDependencyGraph.cpp copasi/utilities/CDependencyGraph.cpp.new + mv copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + touch -r copasi/utilities/CDirEntry.cpp copasi/utilities/CDirEntry.cpp.new + mv copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + touch -r copasi/utilities/CExpressionGenerator.cpp copasi/utilities/CExpressionGenerator.cpp.new + mv copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + touch -r copasi/utilities/CIndexedPriorityQueue.cpp copasi/utilities/CIndexedPriorityQueue.cpp.new + mv copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + touch -r copasi/utilities/CLeastSquareSolution.cpp copasi/utilities/CLeastSquareSolution.cpp.new + mv copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + touch -r copasi/utilities/CLinkMatrix.cpp copasi/utilities/CLinkMatrix.cpp.new + mv copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + touch -r copasi/utilities/CMethodFactory.cpp copasi/utilities/CMethodFactory.cpp.new + mv copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + touch -r copasi/utilities/CParameterEstimationUtils.cpp copasi/utilities/CParameterEstimationUtils.cpp.new + mv copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + touch -r copasi/utilities/CProblemFactory.cpp copasi/utilities/CProblemFactory.cpp.new + mv copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + touch -r copasi/utilities/CProcessReport.cpp copasi/utilities/CProcessReport.cpp.new + mv copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + touch -r copasi/utilities/CReadConfig.cpp copasi/utilities/CReadConfig.cpp.new + mv copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + touch -r copasi/utilities/CSlider.cpp copasi/utilities/CSlider.cpp.new + mv copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + touch -r copasi/utilities/CSparseMatrix.cpp copasi/utilities/CSparseMatrix.cpp.new + mv copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + touch -r copasi/utilities/CTableCell.cpp copasi/utilities/CTableCell.cpp.new + mv copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + touch -r copasi/utilities/CTaskEnum.cpp copasi/utilities/CTaskEnum.cpp.new + mv copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + touch -r copasi/utilities/CTaskFactory.cpp copasi/utilities/CTaskFactory.cpp.new + mv copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + touch -r copasi/utilities/CUnit.cpp copasi/utilities/CUnit.cpp.new + mv copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + touch -r copasi/utilities/CUnitComponent.cpp copasi/utilities/CUnitComponent.cpp.new + mv copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + touch -r copasi/utilities/CUnitDefinition.cpp copasi/utilities/CUnitDefinition.cpp.new + mv copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + touch -r copasi/utilities/CUnitDefinitionDB.cpp copasi/utilities/CUnitDefinitionDB.cpp.new + mv copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + touch -r copasi/utilities/CUnitParser.cpp copasi/utilities/CUnitParser.cpp.new + mv copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + touch -r copasi/utilities/CUnitParser_lex.cpp copasi/utilities/CUnitParser_lex.cpp.new + mv copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + touch -r copasi/utilities/CUnitParser_yacc.cpp copasi/utilities/CUnitParser_yacc.cpp.new + mv copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + touch -r copasi/utilities/CUnitValidator.cpp copasi/utilities/CUnitValidator.cpp.new + mv copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + touch -r copasi/utilities/CValidatedUnit.cpp copasi/utilities/CValidatedUnit.cpp.new + mv copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + touch -r copasi/utilities/CValidity.cpp copasi/utilities/CValidity.cpp.new + mv copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + touch -r copasi/utilities/CVersion.cpp copasi/utilities/CVersion.cpp.new + mv copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + touch -r copasi/utilities/CluX.cpp copasi/utilities/CluX.cpp.new + mv copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + touch -r copasi/utilities/Cmd5.cpp copasi/utilities/Cmd5.cpp.new + mv copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + touch -r copasi/utilities/CopasiTime.cpp copasi/utilities/CopasiTime.cpp.new + mv copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + touch -r copasi/utilities/dgemm.cpp copasi/utilities/dgemm.cpp.new + mv copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + touch -r copasi/utilities/utility.cpp copasi/utilities/utility.cpp.new + mv copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + touch -r copasi/versioning/CModelVersion.cpp copasi/versioning/CModelVersion.cpp.new + mv copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + touch -r copasi/versioning/CModelVersionHierarchy.cpp copasi/versioning/CModelVersionHierarchy.cpp.new + mv copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + touch -r copasi/versioning/CVCard.cpp copasi/versioning/CVCard.cpp.new + mv copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + touch -r copasi/versioningUI/CBrowseModelVersionDialog.cpp copasi/versioningUI/CBrowseModelVersionDialog.cpp.new + mv copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + touch -r copasi/versioningUI/CCreateModelVersionDialog.cpp copasi/versioningUI/CCreateModelVersionDialog.cpp.new + mv copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + touch -r copasi/versioningUI/CQModelVersionHierarchyDM.cpp copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new + mv copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + touch -r copasi/wizard/wizard.cpp copasi/wizard/wizard.cpp.new + mv copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + touch -r copasi/xml/CCopasiXML.cpp copasi/xml/CCopasiXML.cpp.new + mv copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + touch -r copasi/xml/CCopasiXMLInterface.cpp copasi/xml/CCopasiXMLInterface.cpp.new + mv copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + touch -r copasi/xml/CExpat.cpp copasi/xml/CExpat.cpp.new + mv copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + touch -r copasi/xml/CFixLocalReactionParameters.cpp copasi/xml/CFixLocalReactionParameters.cpp.new + mv copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + touch -r copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new + mv copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + touch -r copasi/xml/parser/AssignmentHandler.cpp copasi/xml/parser/AssignmentHandler.cpp.new + mv copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + touch -r copasi/xml/parser/BoundingBoxHandler.cpp copasi/xml/parser/BoundingBoxHandler.cpp.new + mv copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + touch -r copasi/xml/parser/COPASIHandler.cpp copasi/xml/parser/COPASIHandler.cpp.new + mv copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + touch -r copasi/xml/parser/CXMLHandler.cpp copasi/xml/parser/CXMLHandler.cpp.new + mv copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + touch -r copasi/xml/parser/CXMLHandlerFactory.cpp copasi/xml/parser/CXMLHandlerFactory.cpp.new + mv copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + touch -r copasi/xml/parser/CXMLParser.cpp copasi/xml/parser/CXMLParser.cpp.new + mv copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + touch -r copasi/xml/parser/CXMLParserData.cpp copasi/xml/parser/CXMLParserData.cpp.new + mv copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + touch -r copasi/xml/parser/CallParameterHandler.cpp copasi/xml/parser/CallParameterHandler.cpp.new + mv copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + touch -r copasi/xml/parser/ChannelSpecHandler.cpp copasi/xml/parser/ChannelSpecHandler.cpp.new + mv copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + touch -r copasi/xml/parser/CharacterDataHandler.cpp copasi/xml/parser/CharacterDataHandler.cpp.new + mv copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + touch -r copasi/xml/parser/ColorDefinitionHandler.cpp copasi/xml/parser/ColorDefinitionHandler.cpp.new + mv copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + touch -r copasi/xml/parser/CommentHandler.cpp copasi/xml/parser/CommentHandler.cpp.new + mv copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + touch -r copasi/xml/parser/CompartmentGlyphHandler.cpp copasi/xml/parser/CompartmentGlyphHandler.cpp.new + mv copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + touch -r copasi/xml/parser/CompartmentHandler.cpp copasi/xml/parser/CompartmentHandler.cpp.new + mv copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + touch -r copasi/xml/parser/ConstantHandler.cpp copasi/xml/parser/ConstantHandler.cpp.new + mv copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + touch -r copasi/xml/parser/CubicBezierHandler.cpp copasi/xml/parser/CubicBezierHandler.cpp.new + mv copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + touch -r copasi/xml/parser/CurveHandler.cpp copasi/xml/parser/CurveHandler.cpp.new + mv copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + touch -r copasi/xml/parser/DimensionsHandler.cpp copasi/xml/parser/DimensionsHandler.cpp.new + mv copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + touch -r copasi/xml/parser/EllipseHandler.cpp copasi/xml/parser/EllipseHandler.cpp.new + mv copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + touch -r copasi/xml/parser/EventHandler.cpp copasi/xml/parser/EventHandler.cpp.new + mv copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + touch -r copasi/xml/parser/FunctionHandler.cpp copasi/xml/parser/FunctionHandler.cpp.new + mv copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + touch -r copasi/xml/parser/GUIHandler.cpp copasi/xml/parser/GUIHandler.cpp.new + mv copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + touch -r copasi/xml/parser/GradientStopHandler.cpp copasi/xml/parser/GradientStopHandler.cpp.new + mv copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + touch -r copasi/xml/parser/GroupHandler.cpp copasi/xml/parser/GroupHandler.cpp.new + mv copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + touch -r copasi/xml/parser/ImageHandler.cpp copasi/xml/parser/ImageHandler.cpp.new + mv copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + touch -r copasi/xml/parser/InitialStateHandler.cpp copasi/xml/parser/InitialStateHandler.cpp.new + mv copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + touch -r copasi/xml/parser/KineticLawHandler.cpp copasi/xml/parser/KineticLawHandler.cpp.new + mv copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + touch -r copasi/xml/parser/LayoutHandler.cpp copasi/xml/parser/LayoutHandler.cpp.new + mv copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + touch -r copasi/xml/parser/LineEndingHandler.cpp copasi/xml/parser/LineEndingHandler.cpp.new + mv copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + touch -r copasi/xml/parser/LineSegmentHandler.cpp copasi/xml/parser/LineSegmentHandler.cpp.new + mv copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + touch -r copasi/xml/parser/LinearGradientHandler.cpp copasi/xml/parser/LinearGradientHandler.cpp.new + mv copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + touch -r copasi/xml/parser/ListOfCurveSegmentsHandler.cpp copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new + mv copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + touch -r copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new + mv copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + touch -r copasi/xml/parser/ListOfHandler.cpp copasi/xml/parser/ListOfHandler.cpp.new + mv copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + touch -r copasi/xml/parser/ListOfLayoutsHandler.cpp copasi/xml/parser/ListOfLayoutsHandler.cpp.new + mv copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + touch -r copasi/xml/parser/MathMLHandler.cpp copasi/xml/parser/MathMLHandler.cpp.new + mv copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteGlyphHandler.cpp copasi/xml/parser/MetaboliteGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + touch -r copasi/xml/parser/MetaboliteHandler.cpp copasi/xml/parser/MetaboliteHandler.cpp.new + mv copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + touch -r copasi/xml/parser/MethodHandler.cpp copasi/xml/parser/MethodHandler.cpp.new + mv copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + touch -r copasi/xml/parser/MiriamAnnotationHandler.cpp copasi/xml/parser/MiriamAnnotationHandler.cpp.new + mv copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + touch -r copasi/xml/parser/ModelHandler.cpp copasi/xml/parser/ModelHandler.cpp.new + mv copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + touch -r copasi/xml/parser/ModelParameterGroupHandler.cpp copasi/xml/parser/ModelParameterGroupHandler.cpp.new + mv copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + touch -r copasi/xml/parser/ModelParameterHandler.cpp copasi/xml/parser/ModelParameterHandler.cpp.new + mv copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + touch -r copasi/xml/parser/ModelParameterSetHandler.cpp copasi/xml/parser/ModelParameterSetHandler.cpp.new + mv copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + touch -r copasi/xml/parser/ModelValueHandler.cpp copasi/xml/parser/ModelValueHandler.cpp.new + mv copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + touch -r copasi/xml/parser/ModifierHandler.cpp copasi/xml/parser/ModifierHandler.cpp.new + mv copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + touch -r copasi/xml/parser/ObjectHandler.cpp copasi/xml/parser/ObjectHandler.cpp.new + mv copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + touch -r copasi/xml/parser/ParameterDescriptionHandler.cpp copasi/xml/parser/ParameterDescriptionHandler.cpp.new + mv copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + touch -r copasi/xml/parser/ParameterGroupHandler.cpp copasi/xml/parser/ParameterGroupHandler.cpp.new + mv copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + touch -r copasi/xml/parser/ParameterHandler.cpp copasi/xml/parser/ParameterHandler.cpp.new + mv copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + touch -r copasi/xml/parser/ParameterTextHandler.cpp copasi/xml/parser/ParameterTextHandler.cpp.new + mv copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + touch -r copasi/xml/parser/PlotItemHandler.cpp copasi/xml/parser/PlotItemHandler.cpp.new + mv copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + touch -r copasi/xml/parser/PlotSpecificationHandler.cpp copasi/xml/parser/PlotSpecificationHandler.cpp.new + mv copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + touch -r copasi/xml/parser/PointHandler.cpp copasi/xml/parser/PointHandler.cpp.new + mv copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + touch -r copasi/xml/parser/PolygonHandler.cpp copasi/xml/parser/PolygonHandler.cpp.new + mv copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + touch -r copasi/xml/parser/ProductHandler.cpp copasi/xml/parser/ProductHandler.cpp.new + mv copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + touch -r copasi/xml/parser/RadialGradientHandler.cpp copasi/xml/parser/RadialGradientHandler.cpp.new + mv copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + touch -r copasi/xml/parser/ReactionGlyphHandler.cpp copasi/xml/parser/ReactionGlyphHandler.cpp.new + mv copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + touch -r copasi/xml/parser/ReactionHandler.cpp copasi/xml/parser/ReactionHandler.cpp.new + mv copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + touch -r copasi/xml/parser/RectangleHandler.cpp copasi/xml/parser/RectangleHandler.cpp.new + mv copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + touch -r copasi/xml/parser/RenderCurveElementHandler.cpp copasi/xml/parser/RenderCurveElementHandler.cpp.new + mv copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + touch -r copasi/xml/parser/RenderCurveHandler.cpp copasi/xml/parser/RenderCurveHandler.cpp.new + mv copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + touch -r copasi/xml/parser/RenderInformationHandler.cpp copasi/xml/parser/RenderInformationHandler.cpp.new + mv copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + touch -r copasi/xml/parser/RenderTextHandler.cpp copasi/xml/parser/RenderTextHandler.cpp.new + mv copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + touch -r copasi/xml/parser/ReportDefinitionHandler.cpp copasi/xml/parser/ReportDefinitionHandler.cpp.new + mv copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + touch -r copasi/xml/parser/ReportSectionHandler.cpp copasi/xml/parser/ReportSectionHandler.cpp.new + mv copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + touch -r copasi/xml/parser/ReportTargetHandler.cpp copasi/xml/parser/ReportTargetHandler.cpp.new + mv copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + touch -r copasi/xml/parser/SBMLMapHandler.cpp copasi/xml/parser/SBMLMapHandler.cpp.new + mv copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + touch -r copasi/xml/parser/SliderHandler.cpp copasi/xml/parser/SliderHandler.cpp.new + mv copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + touch -r copasi/xml/parser/SourceParameterHandler.cpp copasi/xml/parser/SourceParameterHandler.cpp.new + mv copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + touch -r copasi/xml/parser/StateTemplateHandler.cpp copasi/xml/parser/StateTemplateHandler.cpp.new + mv copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + touch -r copasi/xml/parser/StateTemplateVariableHandler.cpp copasi/xml/parser/StateTemplateVariableHandler.cpp.new + mv copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + touch -r copasi/xml/parser/StyleHandler.cpp copasi/xml/parser/StyleHandler.cpp.new + mv copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + touch -r copasi/xml/parser/SubstrateHandler.cpp copasi/xml/parser/SubstrateHandler.cpp.new + mv copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + touch -r copasi/xml/parser/TableHandler.cpp copasi/xml/parser/TableHandler.cpp.new + mv copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + touch -r copasi/xml/parser/TaskHandler.cpp copasi/xml/parser/TaskHandler.cpp.new + mv copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + touch -r copasi/xml/parser/TextGlyphHandler.cpp copasi/xml/parser/TextGlyphHandler.cpp.new + mv copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + touch -r copasi/xml/parser/UNKNOWNHandler.cpp copasi/xml/parser/UNKNOWNHandler.cpp.new + mv copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + touch -r copasi/xml/parser/UnitDefinitionHandler.cpp copasi/xml/parser/UnitDefinitionHandler.cpp.new + mv copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + touch -r copasi/xml/parser/UnsupportedAnnotationHandler.cpp copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new + mv copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + echo 'Patch #0 (COPASI-fix_install_libpaths.patch):' Patch #0 (COPASI-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_install_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 910 (offset 67 lines). patching file copasi/bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 164 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/perl/CMakeLists.txt Hunk #1 succeeded at 158 (offset 5 lines). Hunk #2 succeeded at 175 (offset 5 lines). patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 163 (offset -2 lines). patching file copasi/bindings/java/CMakeLists.txt Hunk #1 succeeded at 159 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/octave/CMakeLists.txt Hunk #1 succeeded at 153 (offset 6 lines). Patch #4 (COPASI-fix_exe_permissions.patch): + echo 'Patch #4 (COPASI-fix_exe_permissions.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_exe_permissions --fuzz=0 patching file copasi/CopasiSE/CMakeLists.txt patching file copasi/CopasiUI/CMakeLists.txt Patch #6 (COPASI-libCombine_paths.patch): + echo 'Patch #6 (COPASI-libCombine_paths.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .libCombine_paths --fuzz=0 patching file CMakeModules/FindLIBCOMBINE.cmake Hunk #3 succeeded at 147 (offset 25 lines). Patch #7 (COPASI-find_crossguid2.patch): + echo 'Patch #7 (COPASI-find_crossguid2.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_crossguid2 --fuzz=0 patching file CMakeModules/FindCROSSGUID.cmake Hunk #2 succeeded at 35 (offset 1 line). Hunk #3 succeeded at 54 (offset 2 lines). Hunk #4 succeeded at 86 (offset 3 lines). Patch #8 (COPASI-use_c++17.patch): + echo 'Patch #8 (COPASI-use_c++17.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .use_c++17 --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 129 (offset 11 lines). Patch #9 (COPASI-find_libsedml.patch): + echo 'Patch #9 (COPASI-find_libsedml.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_libsedml --fuzz=0 patching file CMakeModules/FindLIBSEDML.cmake Hunk #1 succeeded at 66 (offset 2 lines). Hunk #2 succeeded at 90 (offset 3 lines). Hunk #3 succeeded at 117 (offset 4 lines). Patch #10 (COPASI-find_sbw.patch): + echo 'Patch #10 (COPASI-find_sbw.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_sbw --fuzz=0 patching file CMakeModules/FindSBW.cmake Patch #13 (COPASI-qwt62.patch): + echo 'Patch #13 (COPASI-qwt62.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .qwt --fuzz=0 patching file copasi/plotUI/C2DCurveData.h patching file copasi/plotUI/C2DPlotCurve.h patching file copasi/plotUI/CBandedGraphData.h patching file copasi/plotUI/CHistoCurveData.h patching file copasi/plotUI/CLinearColorMap.h patching file copasi/plotUI/CPlotSpectogram.h patching file copasi/plotUI/CQwtPlot.cpp patching file copasi/plotUI/CQwtPlot.h patching file copasi/plotUI/CSpectorgramData.h patching file copasi/plotUI/scrollzoomer.cpp patching file copasi/plotUI/scrollzoomer.h Patch #14 (COPASI-4.41.283-fix_missing_header.patch): + echo 'Patch #14 (COPASI-4.41.283-fix_missing_header.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/plotUI/CQMarchingSquares.cpp Patch #15 (COPASI-find_qcp_libs.patch): + echo 'Patch #15 (COPASI-find_qcp_libs.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file CMakeModules/FindQCP.cmake Patch #11 (COPASI-porting_to_python310.patch): + echo 'Patch #11 (COPASI-porting_to_python310.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .porting_to_python310 --fuzz=0 patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 156 (offset 3 lines). + echo 'Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch):' Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file CMakeModules/FindQWT.cmake Hunk #1 succeeded at 19 (offset -5 lines). Hunk #2 succeeded at 30 (offset -5 lines). patching file CMakeModules/FindMML.cmake + sed -e 's|@@libdir@@|/usr/lib64|g' -i CMakeModules/FindQWT.cmake Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch): + echo 'Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .QWTPLOT3D_QT5 --fuzz=0 patching file CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_includedir@@|/usr/include/qt5/qwtplot3d-qt5|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_libdir@@|/usr/lib64|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@_libmml_includedir@@|/usr/include/qt5/libmml-qt5|g' -i CMakeModules/FindMML.cmake + sed -e 's|@@_libmml_libdir@@|/usr/lib64|g' -i CMakeModules/FindMML.cmake + sed -i.bak '/double sqrt(doublereal);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double pow_dd(doublereal *, doublereal *);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/int s_copy(char *, char *, ftnlen, ftnlen);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double sqrt(doublereal);/d' copasi/odepack++/dc_decsol.cpp + sed -i.bak '/double sqrt(doublereal),/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/double pow_dd(doublereal *,/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/C_FLOAT64 d_lg10(C_FLOAT64 *);/d' copasi/optimization/CPraxis.cpp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Uj2ZhJ + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-295 + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DCOPASI_OVERRIDE_VERSION:STRING=4.44.295 -DENABLE_PYTHON:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.13 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.13.so -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DENABLE_JIT:BOOL=OFF -DSELECT_QT=Qt5 -DCOPASI_USE_RAPTOR:BOOL=OFF -DSITE:STRING=fedora -DF2C_INTEGER=int -DF2C_LOGICAL=long '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG' -DCOPASI_INSTALL_C_API=OFF -DCombine_DIR:PATH=/usr/lib64/cmake '-DCMAKE_SHARED_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' '-DCMAKE_EXE_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' -DQT_QMAKE_EXECUTABLE:FILEPATH=/usr/bin/qmake-qt5 -DQWT_VERSION_STRING:STRING=6.2.0 -DQWT_LIBRARY:FILEPATH=/usr/lib64/libqwt-qt5.so -DQWT_INCLUDE_DIR:PATH=/usr/include/qt5/qwt -DBUILD_GUI:BOOL=ON -DBUILD_COPASISBW:BOOL=ON -DENABLE_MML:BOOL=ON -DENABLE_USE_SBMLUNIT=ON -DMML_INCLUDE_DIR:PATH=/usr/include/qt5/libmml-qt5 -DMML_LIBRARY:FILEPATH=/usr/lib64/libmml.so -DENABLE_SBW_INTEGRATION=ON -DBUILD_CXX_EXAMPLES=OFF -DENABLE_COPASI_BANDED_GRAPH:BOOL=ON -DENABLE_COPASI_SEDML:BOOL=ON -DENABLE_COPASI_NONLIN_DYN_OSCILLATION:BOOL=ON -DENABLE_COPASI_EXTUNIT:BOOL=ON -DCOPASI_OVERWRITE_USE_LAPACK:BOOL=ON -DNO_BLAS_WRAP:BOOL=ON -DBLA_VENDOR=Generic -DBLAS_blas_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DLAPACK_lapack_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DCROSSGUID_INCLUDE_DIR:PATH=/usr/include/crossguid2 -DENABLE_COPASI_PARAMETERFITTING_RESIDUAL_SCALING:BOOL=ON -DENABLE_WITH_MERGEMODEL:BOOL=ON -DENABLE_USE_MATH_CONTAINER:BOOL=ON -DLIBSBML_INCLUDE_DIR:PATH=/usr/include/sbml -DLIBSBML_SHARED:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBNUML_LIBRARY:FILEPATH=/usr/lib64/libnuml.so -DEXTRA_INCLUDE_DIRS:STRING=-I/usr/include/numl -DEXPAT_LIBRARY:FILEPATH=/usr/lib64/libexpat.so -DEXPAT_INCLUDE_DIR:PATH=/usr/include -DF2C_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DENABLE_GPROF:BOOL=OFF -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DENABLE_FLEX_BISON:BOOL=ON -DBISON_EXECUTABLE:FILEPATH=/usr/bin/bison -DPREFER_STATIC:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCOPASI_USE_QCUSTOMPLOT:BOOL=ON CMake Warning: No source or binary directory provided. Both will be assumed to be the same as the current working directory, but note that this warning will become a fatal error in future CMake releases. -- The C compiler identification is GNU 15.0.0 -- The CXX compiler identification is GNU 15.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for strptime -- Looking for strptime - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of void* -- Check size of void* - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of size_t -- Check size of size_t - done -- Performing Test EXPAT_EXPAT_TEST -- Performing Test EXPAT_EXPAT_TEST - Success -- Found EXPAT: /usr/lib64/libexpat.so (found version "2.6.4") -- Found LIBSBML: sbml -- Found LIBSEDML: /lib64/libsedml.so (found version "2.0.32") -- Found LIBCOMBINE: /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat (found version "0.2.20") -- Found FLEX: /usr/bin/flex (found version "2.6.4") -- Found BISON: /usr/bin/bison (found version "3.8.2") -- A library with BLAS API not found. Please specify library location. -- LAPACK requires BLAS -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- Found CLAPACK: /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so -- Found PkgConfig: /usr/bin/pkg-config (found version "2.3.0") -- Found LIBUUID: //usr/lib64/libuuid.so -- Found CROSSGUID: /usr/include/crossguid2 -- Found OpenGL: /usr/lib64/libOpenGL.so -- Found QCP: /usr/lib64/libqcustomplot-qt5.so -- Using Qt5 -- Found QWT: /usr/lib64/libqwt-qt5.so -- Found MML: /usr/lib64/libmml.so -- Found SBW: //usr/lib64/libSBW.so -- Found SWIG: /usr/bin/swig (found version "4.3.0") -- Mocing with options: -DWITH_TIME_SENS=1;-DWITH_QT5_VISUALIZATION=1;-DCOPASI_SBW_INTEGRATION=1;-DCOPASI_BANDED_GRAPH=1;-DCOPASI_NONLIN_DYN_OSCILLATION=1;-DQT_USE_TEXTBROWSER=1;-DCOPASI_USE_QWT=1;-DCOPASI_USE_QCUSTOMPLOT=1;-DQWT_VERSION=0x060200 -- Mocing files for subdir: barChart -- Mocing files for subdir: layoutUI -- Mocing files for subdir: MIRIAMUI -- Mocing files for subdir: plotUI -- Mocing files for subdir: tex -- Mocing files for subdir: UI -- Mocing files for subdir: wizard -- Mocing files for subdir: qlayout -- Mocing files for subdir: undoFramework -- Mocing files for subdir: undoUI -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found ZLIB: /lib64/libz.so (found version "1.3.1.zlib-ng") -- Found PythonInterp: /usr/bin/python3 (found version "3.13.1") -- Found PythonLibs: /usr/lib64/libpython3.13.so (found version "3.13.1") -- Found Python: /usr/bin/python3.13 (found version "3.13.1") found components: Interpreter -- ----------------------------------------------------------- Building COPASI 4.44.295 (Release) Source Dir = /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 Binary Dir = /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 Install Prefix = /usr Dependencies: Vendor = Generic LAPACK Libs = /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so LAPACK LDFLAGS = crossguid Libs = /lib64/libcrossguid2.so;//usr/lib64/libuuid.so cross include = /usr/include/crossguid2 Expat version = 2.6.4 Expat Libs = /usr/lib64/libexpat.so Expat include = /usr/include Raptor version = Raptor Libs = Raptor include = libSBML version = libSBML lib = /usr/lib64/libsbml.so libSBML include = /usr/include/sbml Qt version = 5.15.15 Qt lib = Qt5::Concurrent;Qt5::Core;Qt5::Gui;Qt5::Widgets;Qt5::Network;Qt5::OpenGL;Qt5::PrintSupport;Qt5::Svg;Qt5::Xml;Qt5::DataVisualization Qt include = /usr/include/qt5/;/usr/include/qt5/QtConcurrent;/usr/include/qt5/QtCore;/usr/lib64/qt5//mkspecs/linux-g++;/usr/include/qt5/QtGui;/usr/include/qt5/QtWidgets;/usr/include/qt5/QtNetwork;/usr/include/qt5/QtOpenGL;/usr/include/qt5/QtPrintSupport;/usr/include/qt5/QtSvg;/usr/include/qt5/QtXml;/usr/include/qt5/QtDataVisualization QWT version = 6.2.0 (0x60200) QWT lib = /usr/lib64/libqwt-qt5.so QWT include = /usr/include/qt5/qwt qwtplot3d lib = qwtplot3d include = qtmml lib = /usr/lib64/libmml.so qtmml include = /usr/include/qt5/libmml-qt5 SBW version = SBW lib = //usr/lib64/libSBW.so SBW include = /usr/include libSEDML version = 2.0.32 libSEDML lib = /lib64/libsedml.so libSEDML include = /usr/include Combine version = 0.2.20 Combine lib = /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat Combine include = /usr/include NativeJIT lib = NativeJIT include = NativeJIT CXX Flags = cpu_features lib = cpu_features include = OpenMP Libs = OpenMP CXX Flags = Options: COPASI_EXTUNIT = ON SBW integration = ON Model Merging = ON SEDML support = ON Combine Archive support = ON SDE support = ON GPROF support = OFF UNDO framework = ON Versioning framework = OFF Provenance framework = OFF Analytics Task = OFF Time Sensitivities task = ON JIT Compilation = OFF OpenMP = OFF CXX Flags = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC Additional Defines = Linux;HAVE_F2C_H;LINUX Language Bindings: SWIG = /usr/bin/swig .NET Bindings = OFF Java Bindings = OFF Python Bindings = ON Perl Bindings = OFF Octave Bindings = OFF R Bindings = OFF Building: COPASI SE = ON COPASI UI = ON C++ Examples = OFF SBML TestRunner = OFF Franks TestRunner = OFF Semantic Testsuite = OFF Stochastic Testsuite = OFF Steady State TestRunner = OFF MCA TestRunner = OFF ----------------------------------------------------------- -- Configuring done (4.0s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP COPASI_OVERWRITE_USE_LAPACK CSHARP_COMPILER ENABLE_COPASI_SEDML ENABLE_USE_MATH_CONTAINER ENABLE_USE_SBMLUNIT ENABLE_WITH_MERGEMODEL QT_QMAKE_EXECUTABLE SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 + /usr/bin/cmake --build . -j4 --verbose Change Dir: '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -B/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/CMakeFiles /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/depend /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi 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Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CInfo.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CBiologicalDescription.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CConstants.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CBiologicalDescription.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CBiologicalDescription.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:50: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:451:56: required from here 451 | static_cast< CTrajectoryTask * >(&mData.pTaskList->operator[]("Time-Course"))->load(inbuf); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::openCombineArchive(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2219:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2219 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2246:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2246 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2262:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2262 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2068:8: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 2068 | bool result = true; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::importSEDML(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2389:17: warning: unused variable ‘pSEDMLDocument’ [-Wunused-variable] 2389 | SedDocument * pSEDMLDocument = NULL; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2393:18: warning: unused variable ‘pSBMLDocument’ [-Wunused-variable] 2393 | SBMLDocument * pSBMLDocument = NULL; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2394:20: warning: unused variable ‘pLol’ [-Wunused-variable] 2394 | CListOfLayouts * pLol = NULL; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2395:29: warning: unused variable ‘pLotList’ [-Wunused-variable] 2395 | COutputDefinitionVector * pLotList = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::exportSEDML(const std::string&, bool, int, int, bool, bool, CProcessReport*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.cpp:2587:17: warning: unused variable ‘pOrigSEDMLDocument’ [-Wunused-variable] 2587 | SedDocument * pOrigSEDMLDocument = NULL; | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h:219:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 219 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h:214:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 214 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.cpp:434:1: warning: when initialized here [-Wreorder] 434 | CMIRIAMResource::CMIRIAMResource(const std::string & name, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h:219:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 219 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h:214:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 214 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.cpp:446:1: warning: when initialized here [-Wreorder] 446 | CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource & src, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h:219:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 219 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.h:214:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 214 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CMIRIAMResource.cpp:458:1: warning: when initialized here [-Wreorder] 458 | CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup & group, | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModified.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModified.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModified.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModified.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraphConverter.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp: In function ‘void addXmlNodeToGraph(CRDFGraph&, XMLNode&, CRDFSubject&, const std::string&, const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp:793:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 793 | for (int i = 0; i < current.getNumChildren(); ++i) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp:800:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 800 | for (int i = 0; i < current.getNumChildren(); ++i) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp: In static member function ‘static CRDFGraph* CRDFGraph::fromString(const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp:845:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 845 | for (int i = 0; i < desc.getNumChildren(); ++i) | ~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp: In member function ‘XMLNode* TreeNode::createNode()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFGraph.cpp:910:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const std::__cxx11::basic_string::size_type’ {aka ‘const long unsigned int’} [-Wsign-compare] 910 | if (pos == std::string::npos) | ~~~~^~~~~~~~~~~~~~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFLiteral.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFNode.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFObject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFParser.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFPredicate.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFSubject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFTriplet.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFUtilities.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRDFWriter.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CRaptorInit.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArrayElementReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CCommonName.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CReference.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CReference.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CCore.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObjectMap.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObjectMap.cpp: In member function ‘void CDataObjectMap::objectRenamed(CDataObject*, const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObjectMap.cpp:301:16: warning: unused variable ‘success’ [-Wunused-variable] 301 | bool success = (itMap->second.erase(pObject) > 0); | ^~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataString.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataTimer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CObjectInterface.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRegisteredCommonName.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CObjectInterface.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CObjectInterface.cpp:15: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.cpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CLocaleString.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h: In constructor ‘CRootContainer::CRootContainer(const bool&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h:75:23: warning: ‘CRootContainer::mpUnitDefinitionList’ will be initialized after [-Wreorder] 75 | CUnitDefinitionDB * mpUnitDefinitionList; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h:73:23: warning: ‘CConfigurationFile* CRootContainer::mpConfiguration’ [-Wreorder] 73 | CConfigurationFile* mpConfiguration; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.cpp:43:1: warning: when initialized here [-Wreorder] 43 | CRootContainer::CRootContainer(const bool & withGUI): | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.cpp:114:1: warning: when initialized here [-Wreorder] 114 | CConfigurationFile::CConfigurationFile(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const CConfigurationFile&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/CConfigurationFile.cpp:148:1: warning: when initialized here [-Wreorder] 148 | CConfigurationFile::CConfigurationFile(const CConfigurationFile & src, | ^~~~~~~~~~~~~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/COptionParser.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/COptions.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalBase.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalCall.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalChoice.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CEvaluationNodeNormalizer.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalChoiceLogical.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalFraction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalFunction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalGeneralPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalItem.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalItemPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLcm.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalItem.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets&, TemplateSetOfSets&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.cpp:39:16: required from here 39 | copySetOfSets(src.mChoices, this->mChoices); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets&, TemplateSetOfSets&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.cpp:41:16: required from here 41 | copySetOfSets(src.mAndSets, this->mAndSets); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.cpp:216:18: required from here 216 | copySet((*it).first, tmpSet); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.cpp:494:22: required from here 494 | copySet((*it2).first, tmpSet); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogicalItem.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalProduct.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalSum.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalProduct.cpp: In copy constructor ‘CNormalProduct::CNormalProduct(const CNormalProduct&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalProduct.cpp:73:12: warning: unused variable ‘result’ [-Wunused-variable] 73 | bool result = this->mItemPowers.insert(pDestItemPower).second; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalSum.cpp: In copy constructor ‘CNormalSum::CNormalSum(const CNormalSum&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalSum.cpp:93:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 93 | bool tmpRes = mProducts.insert(new CNormalProduct(*pTmpProduct)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalSum.cpp:102:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 102 | bool tmpRes = mFractions.insert(new CNormalFraction(**it2)).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalTranslation.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/ConvertToCEvaluationNode.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalTranslation.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CNormalFraction* CNormalTranslation::normAndSimplifyReptdly(const CEvaluationNode*, unsigned int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalTranslation.cpp:175:20: warning: unused variable ‘pFraction’ [-Wunused-variable] 175 | CNormalFraction* pFraction = dynamic_cast(base0); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CEvaluationNode* CNormalTranslation::newCancel(const CEvaluationNode*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalTranslation.cpp:4076:34: warning: unused variable ‘pChild2’ [-Wunused-variable] 4076 | const CEvaluationNode* pChild2 = dynamic_cast(pChild1->getSibling()); | ^~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:59: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2637:44: required from here 2637 | CNormalLogical::copySet((*it).first, tmpSet); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2647:44: required from here 2647 | CNormalLogical::copySet((*it2).first, tmpSet); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:54: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:32: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:55: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:65: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionMethod.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp: In function ‘bool contains_necessary_mass_action_elements(const CDataVector&, const CNormalProduct*, const CModel*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:1231:25: warning: unused variable ‘pDatamodel’ [-Wunused-variable] 1231 | const CDataModel* pDatamodel = dynamic_cast(pModel->getObjectParent()); | ^~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionProblem.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionTask.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionProblem.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCrossSectionProblem&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionProblem.cpp:95:21: warning: unused variable ‘pDataModel’ [-Wunused-variable] 95 | const CDataModel* pDataModel = o.getObjectDataModel(); | ^~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionTask.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionTask.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionTask.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp: In function ‘normalize_variable_names(CNormalBase*, std::map, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:271:54: warning: ‘this’ pointer is null [-Wnonnull] 271 | normalize_variable_names(&pChoice->getCondition(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalChoice.h:46:21: note: in a call to non-static member function ‘CNormalChoice::getCondition()’ 46 | CNormalLogical& getCondition(); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:272:59: warning: ‘this’ pointer is null [-Wnonnull] 272 | normalize_variable_names(&pChoice->getTrueExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalChoice.h:49:22: note: in a call to non-static member function ‘CNormalChoice::getTrueExpression()’ 49 | CNormalFraction& getTrueExpression(); | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/compare_utilities.cpp:273:60: warning: ‘this’ pointer is null [-Wnonnull] 273 | normalize_variable_names(&pChoice->getFalseExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/compareExpressions/CNormalChoice.h:52:22: note: in a call to non-static member function ‘CNormalChoice::getFalseExpression()’ 52 | CNormalFraction& getFalseExpression(); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionTask.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternMethod.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternMethod.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternMethod.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternMethod.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternMethod.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternMethod.h:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternTree.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternTreeNode.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMAlgorithm.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMAlgorithm.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMProblem.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMAlgorithm.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMMethod.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMMethod.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMMethod.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMAlgorithm.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMMethod.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMTask.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMProblem.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMProblem.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMProblem.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMProblem.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CFluxMode.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMProblem.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMProblem.cpp: In member function ‘virtual void CEFMProblem::printResult(std::ostream*) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMProblem.cpp:218:62: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 218 | pTask->getSpeciesChanges(*itMode, **itSpecies); | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMTask.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMTask.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CFluxScore.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMTask.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMTask.cpp: In member function ‘std::pair CEFMTask::getSpeciesChanges(const CFluxMode&, const CMetab&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CEFMTask.cpp:212:27: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 212 | const CMetab & metab) const | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CFluxMode.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CStepMatrix.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CStepMatrixColumn.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CTableauLine.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CTableauMatrix.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CZeroSet.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationParser_yacc.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects 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/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationLexer_lex.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CDerive.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from CEvaluationParser.ypp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /raid/shoops/git/COPASI/copasi/function/CEvaluationLexer.lpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CDerive.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CDerive.cpp: In member function ‘CEvaluationNode* CDerive::deriveBranch(const CEvaluationNode*, const CDataObject*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CDerive.cpp:508:25: warning: unused variable ‘tmpFunction’ [-Wunused-variable] 508 | const CFunction * tmpFunction = dynamic_cast(pENCall->getCalledTree()); | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::setCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.cpp:171:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 171 | switch (pFunctionParameter->getUsage()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::addCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.cpp:217:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 217 | switch (pFunctionParameter->getUsage()) | ^ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.cpp: In member function ‘bool CEvaluationNode::operator<(const CEvaluationNode&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.cpp:861:10: warning: enumeration value ‘UNIT’ not handled in switch [-Wswitch] 861 | switch (mainType()) | ^ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeChoice.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.cpp:617: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeChoice.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeChoice.cpp:276: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp: In member function ‘virtual ASTNode* CEvaluationNodeConstant::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 238 | switch (subType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeConstant.cpp:271: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeDelay.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeDelay.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeDelay.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeDelay.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual ASTNode* CEvaluationNodeFunction::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1102 | switch (subType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1102:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual std::string CEvaluationNodeFunction::getMMLString(const std::vector >&, bool, const std::vector > >&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1530 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.cpp:1530:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp: In constructor ‘CEvaluationNodeLogical::CEvaluationNodeLogical(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 53 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CIssue CEvaluationNodeLogical::compile()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 123 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::getUnit(const CMathContainer&, const std::vector&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 422 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::setUnit(const CMathContainer&, const std::map&, std::map&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 458 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeLogical::fromAST(const ASTNode*, const std::vector&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 553 | switch (subType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:492:10: warning: unused variable ‘i’ [-Wunused-variable] 492 | size_t i = 0; | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeLogical.cpp:668: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp: In constructor ‘CEvaluationNodeNumber::CEvaluationNodeNumber(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 51 | switch (subType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp: In member function ‘virtual ASTNode* CEvaluationNodeNumber::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 240 | switch (subType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeNumber.cpp:275: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp: In constructor ‘CEvaluationNodeObject::CEvaluationNodeObject(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 61 | switch (subType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual CIssue CEvaluationNodeObject::compile()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 131 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:131:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual const CCopasiNode >::Data& CEvaluationNodeObject::getData() const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 335 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:335:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual std::string CEvaluationNodeObject::getInfix(const std::vector >&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 362 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:362:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp: In member function ‘void CEvaluationNodeObject::setObjectValuePtr(double*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 559 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeObject.cpp:559:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeOperator::fromAST(const ASTNode*, const std::vector&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | size_t i = 0, iMax = children.size(); | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual ASTNode* CEvaluationNodeOperator::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 513 | switch (subType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:513:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1508: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual std::string CEvaluationNodeOperator::getMMLString(const std::vector >&, bool, const std::vector > >&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1520 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeOperator.cpp:1520:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeUnit.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp: In constructor ‘CEvaluationNodeStructure::CEvaluationNodeStructure(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 40 | switch (subType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeVariable.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeUnit.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeVector.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeWhiteSpace.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeVariable.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeVariable.cpp:118: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeVector.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeWhiteSpace.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/fstream:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/copasi.h:55, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:25: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp: In member function ‘bool CEvaluationTree::setTree(const ASTNode&, bool)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:635:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 635 | switch (TargetType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:619:20: warning: unused variable ‘pErrorNode’ [-Wunused-variable] 619 | CEvaluationNode *pErrorNode = NULL; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp: In static member function ‘static CEvaluationNode* CEvaluationTree::fromAST(const ASTNode*, bool)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] 684 | switch (itNode->getType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.cpp: In member function ‘void CExpression::initObjects()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.cpp:61:22: warning: unused variable ‘pObject’ [-Wunused-variable] 61 | CObjectInterface * pObject = | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.cpp:227: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionAnalyzer.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionAnalyzer.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParameters(const CFunctionParameters&, std::vector&, bool)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionAnalyzer.cpp:1197:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1197 | switch (role) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParametersActualValues(std::vector&, const CReaction*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionAnalyzer.cpp:1229:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1229 | switch (role) | ^ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.cpp: In member function ‘size_t CFunctionParameters::findParameterByName(const std::string&, const CFunctionParameter**) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.cpp:199:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 199 | if (ppFunctionParameter != NULL) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.cpp:195:10: warning: unused variable ‘imax’ [-Wunused-variable] 195 | size_t imax = mParameters.size(); | ^~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CKinFunction.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CKinFunction.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CKinFunction.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CMassAction.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CNodeK.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CAbstractLayoutInterface.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CCopasiSpringLayout.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CMassAction.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CMassAction.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CMassAction.cpp:151: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CNodeK.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CNodeK.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLBase.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CCopasiSpringLayout.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLColorDefinition.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlyphs.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CCopasiSpringLayout.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CCopasiSpringLayout.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CCopasiSpringLayout.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLCurve.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CCopasiSpringLayout.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLDefaultStyles.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLEllipse.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLDefaultStyles.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLEllipse.cpp:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalStyle.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlyphs.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGradientBase.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalStyle.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalStyle.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGradientStop.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGradientStops.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalObject.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalObject.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalObject.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLImage.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLImageTexturizer.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLayoutRenderer.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.cpp: In member function ‘RenderGroup* CLGroup::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.cpp:884:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 884 | int result; | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLayoutRenderer.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLayoutRenderer.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:15: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLayoutRenderer.cpp:67: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLayoutRenderer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLinearGradient.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLayoutRenderer.cpp: In static member function ‘static std::pair CLLayoutRenderer::calculate_intersection_point_2d(double, double, double, double, double, double, double, double)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLayoutRenderer.cpp:4500:167: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 4500 | std::pair CLLayoutRenderer::calculate_intersection_point_2d(double p1x, double p1y, double sx, double sy, double p2x, double p2y, double tx, double ty) | ^ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalStyle.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLPolygon.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.cpp: In member function ‘LocalRenderInformation* CLLocalRenderInformation::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.cpp:201:11: warning: unused variable ‘result’ [-Wunused-variable] 201 | int result = pLRI->addStyle(pStyle); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalStyle.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLPolygon.cpp:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRadialGradient.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLReactionGlyph.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRectangle.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRectangle.cpp:14: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRelAbsVector.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderCubicBezier.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderCurve.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderFlattener.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderCurve.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderFlattener.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderFlattener.cpp:11: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderPoint.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.cpp: In member function ‘void CLRenderInformationBase::addSBMLAttributes(RenderInformationBase*) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.cpp:439:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 439 | int result; | ^~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderResolver.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderResolver.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLText.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLText.cpp:15: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLUnresolvedReferenceException.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayoutEngine.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayoutInitializer.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayoutState.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayoutInitializer.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayoutInitializer.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayoutState.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/SBMLDocumentLoader.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/SBMLDocumentLoader.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/SBMLDocumentLoader.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/SBMLDocumentLoader.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/SBMLDocumentLoader.cpp: In static member function ‘static CLayout* SBMLDocumentLoader::createLayout(const Layout&, const std::map, std::__cxx11::basic_string >&, std::map, std::__cxx11::basic_string >&, const std::map, std::__cxx11::basic_string >&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/SBMLDocumentLoader.cpp:272:10: warning: unused variable ‘count’ [-Wunused-variable] 272 | size_t count = idToKeyMap.size() + globalIdToKeyMap.size(); | ^~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/utility_classes.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/utility_classes.cpp:14: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAProblem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAProblem.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAProblem.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAProblem.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAProblem.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNATask.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAProblem.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAProblem.cpp:91:75: required from here 91 | pSubTask = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.cpp: In member function ‘int CLNAMethod::calculateCovarianceMatrixReduced()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.cpp:303:21: warning: unused variable ‘pJacobian’ [-Wunused-variable] 303 | const C_FLOAT64 * pJacobian = mJacobianReduced.array(); | ^~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNATask.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapProblem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNATask.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNATask.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNATask.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNATask.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapProblem.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapProblem.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapProblem.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapProblem.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CJitCompiler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CJitCompilerImplementation.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CJitCompilerImplementation.cpp:9: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CJitExpression.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDelay.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyNode.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:315:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 315 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer(CModel&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:417:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 417 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDelay.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createSynchronizeInitialValuesSequence()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:2580:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2580 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createApplyInitialValuesSequence()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:2741:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2741 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyNode.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDelay.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyNode.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp: In member function ‘std::string CMathDependencyGraph::getDOTNodeId(const CObjectInterface*) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp:662:14: warning: enumeration value ‘Noise’ not handled in switch [-Wswitch] 662 | switch (pMathObject->getValueType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp:662:14: warning: enumeration value ‘ParticleNoise’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp:662:14: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp:662:14: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp:662:14: warning: enumeration value ‘TransitionTime’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyGraph.cpp:662:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDependencyNodeIterator.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDerive.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDerive.cpp:11: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDerive.cpp: In member function ‘void CMathDerive::initOneVar(size_t, size_t)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathDerive.cpp:41:16: warning: unused variable ‘pVMO’ [-Wunused-variable] 41 | CMathObject* pVMO = mpContainer->getMathObject(&mpContainer->getValues()[var]); | ^~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEnum.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.h: In copy constructor ‘CMathEventQueue::CAction::CAction(const CMathEventQueue::CAction&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.h:190:23: warning: ‘CMathEventQueue::CAction::mpPriority’ will be initialized after [-Wreorder] 190 | const C_FLOAT64 * mpPriority; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.h:185:26: warning: ‘CVector CMathEventQueue::CAction::mValues’ [-Wreorder] 185 | CVector< C_FLOAT64 > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.cpp:85:1: warning: when initialized here [-Wreorder] 85 | CMathEventQueue::CAction::CAction(const CAction & src): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.cpp: In constructor ‘CMathEventQueue::CAction::CAction(CMathEvent*, CMathEventQueue*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEventQueue.cpp:103:10: warning: enumeration value ‘Stop’ not handled in switch [-Wswitch] 103 | switch (pEvent->getType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp: In static member function ‘static CEvaluationNode* CMathEvent::CTrigger::compileLE(const CEvaluationNode*, const std::vector&, const CMath::Variables&, CRootProcessor*&, CMathContainer&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 979 | switch (pTriggerNode->subType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathHistory.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_construct.h:61, from /usr/include/c++/15/bits/stl_tempbuf.h:61, from /usr/include/c++/15/memory:68, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:18: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp: In member function ‘virtual CIssue CMathExpression::compile()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 285 | switch ((*it)->subType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathReaction.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::compile(CMathContainer&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] 643 | switch (mValueType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createIntensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:1833:22: warning: unused variable ‘pNumber’ [-Wunused-variable] 1833 | CObjectInterface * pNumber = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:1834:22: warning: unused variable ‘pCompartment’ [-Wunused-variable] 1834 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createExtensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:1868:22: warning: variable ‘pIntensiveValue’ set but not used [-Wunused-but-set-variable] 1868 | CObjectInterface * pIntensiveValue = NULL; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathObject.cpp:1869:22: warning: variable ‘pCompartment’ set but not used [-Wunused-but-set-variable] 1869 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathUpdateSequence.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathReaction.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathReaction.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathUpdateSequence.cpp:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqParser_yacc.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqParser_lex.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CAnnotation.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEq.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CAnnotation.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CAnnotation.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEq.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEq.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEq.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CAnnotation.cpp: In member function ‘void CAnnotation::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CAnnotation.cpp:160:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 160 | switch (type) | ^ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqElement.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqInterface.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqElement.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqElement.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqInterface.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqInterface.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqInterface.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqInterface.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqInterface.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqParser.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMMLOutput.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMMLOutput.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMMLOutput.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMMLOutput.cpp: In static member function ‘static void CMMLOutput::writeDifferentialEquations(std::ostream&, CModel*, bool, bool, bool)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMMLOutput.cpp:284:8: warning: variable ‘hasContents’ set but not used [-Wunused-but-set-variable] 284 | bool hasContents = false; | ^~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetabNameInterface.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetabNameInterface.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetabNameInterface.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelAnalyzer.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelExpansion.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelExpansion.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelAnalyzer.cpp: In member function ‘CReactionResult CModelAnalyzer::checkReaction(const CReaction*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelAnalyzer.cpp:196:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 196 | switch (role) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:61: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h: In constructor ‘CModel::CModel(CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1223:86: warning: ‘CModel::mReactionsPerSpecies’ will be initialized after [-Wreorder] 1223 | std::map < const CMetab *, std::set< std::pair< const CReaction *, C_FLOAT64 > > > mReactionsPerSpecies; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: warning: ‘CDataVectorN CModel::mValues’ [-Wreorder] 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:202:1: warning: when initialized here [-Wreorder] 202 | CModel::CModel(CDataContainer* pParent): | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp: In member function ‘bool CModel::handleUnusedMetabolites()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:928:23: warning: variable ‘pStoiEnd’ set but not used [-Wunused-but-set-variable] 928 | C_FLOAT64 * pStoi, *pStoiEnd, *pRowEnd; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:2581: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp: In function ‘const CObjectInterface* getDependentOrNull(const std::map&, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:2600:22: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 2600 | if (it->second == index) return it->first; | ~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:2620:85: required from here 2620 | const CFitTask* task = dynamic_cast(&dataModel->getTaskList()->operator[]("Parameter Estimation")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp: In member function ‘void CModel::updateInitialValues(std::set&, bool)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.cpp:3441:8: warning: unused variable ‘success’ [-Wunused-variable] 3441 | bool success = compileIfNecessary(NULL); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp: In member function ‘virtual CUndoObjectInterface* CModelParameterSet::insert(const CData&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:84:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 84 | switch (CModelParameter::TypeNames.toEnum(data.getProperty(CData::OBJECT_TYPE).toString(), CModelParameter::Type::unknown)) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 150 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:139:1: warning: when initialized here [-Wreorder] 139 | CModelParameterSet::CModelParameterSet(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const CModelParameterSet&, const CDataContainer*, const bool&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 185 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelParameterSet::CModelParameterSet(const CModelParameterSet & src, | ^~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const std::string&, const CDataContainer*, const std::string&, const CFlags&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelEntity::CModelEntity(const std::string & name, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const CModelEntity&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.cpp:200:1: warning: when initialized here [-Wreorder] 200 | CModelEntity::CModelEntity(const CModelEntity & src, | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.cpp: In member function ‘void CMoiety::initObjects()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.cpp:122:17: warning: unused variable ‘pObject’ [-Wunused-variable] 122 | CDataObject * pObject = addObjectReference("Amount", mIAmount, CDataObject::ValueDbl); | ^~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CObjectLists.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CObjectLists.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.cpp: In member function ‘std::string CReaction::getReactionScheme() const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.cpp:2314:15: warning: unused variable ‘pModel’ [-Wunused-variable] 2314 | CDataModel* pModel = getObjectDataModel(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp: In member function ‘CUndoData CReactionInterface::createUndoData(const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:454:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 454 | switch (framework) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:508:27: warning: unused variable ‘pObject’ [-Wunused-variable] 508 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:568:27: warning: unused variable ‘pObject’ [-Wunused-variable] 568 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp: In member function ‘std::vector > CReactionInterface::getUnitVector(size_t) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:1295:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1295 | switch (getUsage(index)) | ^ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CState.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getUnit(size_t) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:1347:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1347 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getEffectiveKineticLawUnit() const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘Default’ not handled in switch [-Wswitch] 1683 | switch (getEffectiveKineticLawUnitType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CState.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CState.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesMethod.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesMethod.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesMethod.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesMethod.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesProblem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesProblem.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesProblem.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesProblem.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesProblem.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesTask.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CInternalSolver.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CLSODA.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesTask.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesTask.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/moieties/CMoietiesTask.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CLSODAR.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/Cxerrwd.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/common.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp: In member function ‘int CRadau5::operator()(int*, evalF, double*, double*, double*, double*, double*, double*, int*, evalJ, int*, int*, int*, evalM, int*, int*, int*, evalO, int*, double*, int*, int*, int*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:127:17: warning: unused variable ‘io___10’ [-Wunused-variable] 127 | static cilist io___10 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:128:17: warning: unused variable ‘io___12’ [-Wunused-variable] 128 | static cilist io___12 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:129:17: warning: unused variable ‘io___15’ [-Wunused-variable] 129 | static cilist io___15 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:130:17: warning: unused variable ‘io___17’ [-Wunused-variable] 130 | static cilist io___17 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:131:17: warning: unused variable ‘io___19’ [-Wunused-variable] 131 | static cilist io___19 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:132:17: warning: unused variable ‘io___24’ [-Wunused-variable] 132 | static cilist io___24 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:133:17: warning: unused variable ‘io___29’ [-Wunused-variable] 133 | static cilist io___29 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:134:17: warning: unused variable ‘io___31’ [-Wunused-variable] 134 | static cilist io___31 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:135:17: warning: unused variable ‘io___33’ [-Wunused-variable] 135 | static cilist io___33 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:136:17: warning: unused variable ‘io___36’ [-Wunused-variable] 136 | static cilist io___36 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:137:17: warning: unused variable ‘io___39’ [-Wunused-variable] 137 | static cilist io___39 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:138:17: warning: unused variable ‘io___43’ [-Wunused-variable] 138 | static cilist io___43 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:139:17: warning: unused variable ‘io___50’ [-Wunused-variable] 139 | static cilist io___50 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:140:17: warning: unused variable ‘io___52’ [-Wunused-variable] 140 | static cilist io___52 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:141:17: warning: unused variable ‘io___68’ [-Wunused-variable] 141 | static cilist io___68 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:142:17: warning: unused variable ‘io___72’ [-Wunused-variable] 142 | static cilist io___72 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp: In function ‘int radcor_(int*, CRadau5::evalF, double*, double*, double*, double*, double*, double*, double*, int*, CRadau5::evalJ, int*, int*, int*, CRadau5::evalM, int*, int*, CRadau5::evalO, int*, int*, int*, double*, double*, double*, double*, double*, double*, int*, int*, long int*, int*, int*, int*, long int*, double*, double*, int*, int*, int*, long int*, long int*, int*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, int*, int*, int*, double*, int*, int*, int*, int*, int*, int*, int*, double*, int*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:1071:20: warning: variable ‘index1’ set but not used [-Wunused-but-set-variable] 1071 | static C_LOGICAL index1, index2, index3, caljac; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:1107:17: warning: unused variable ‘io___176’ [-Wunused-variable] 1107 | static cilist io___176 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:1108:17: warning: unused variable ‘io___177’ [-Wunused-variable] 1108 | static cilist io___177 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:1109:17: warning: unused variable ‘io___178’ [-Wunused-variable] 1109 | static cilist io___178 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:1110:17: warning: unused variable ‘io___179’ [-Wunused-variable] 1110 | static cilist io___179 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:1111:17: warning: unused variable ‘io___180’ [-Wunused-variable] 1111 | static cilist io___180 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:1112:17: warning: unused variable ‘io___181’ [-Wunused-variable] 1112 | static cilist io___181 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:1113:17: warning: unused variable ‘io___182’ [-Wunused-variable] 1113 | static cilist io___182 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:53:14: warning: ‘c__3’ defined but not used [-Wunused-variable] 53 | static C_INT c__3 = 3; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:52:14: warning: ‘c__5’ defined but not used [-Wunused-variable] 52 | static C_INT c__5 = 5; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:51:14: warning: ‘c__1’ defined but not used [-Wunused-variable] 51 | static C_INT c__1 = 1; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/CRadau5.cpp:50:14: warning: ‘c__9’ defined but not used [-Wunused-variable] 50 | static C_INT c__9 = 9; | ^~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dbnorm.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dc_decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dcfode.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dewset.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dfnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dintdy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dmnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dprja.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/drcheck.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dsolsy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/odepack++/dstoda.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CRandomContext.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CRandomContext.cpp: In member function ‘void CRandomContext::init(CRandom::Type, unsigned int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CRandomContext.cpp:30:1: warning: label ‘Base’ defined but not used [-Wunused-label] 30 | Base: master() = NULL; | ^~~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptItem.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptLog.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:9831:3: warning: ‘/*’ within comment [-Wcomment] 9831 | /* ret_val = i1mach_(&mdperm[*k - 1]); */ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.cpp:6: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp: In function ‘doublereal d1mach_(integer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:391:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 391 | fprintf(stderr, "invalid argument: d1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp: In function ‘int da7sst_(integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:1090:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1090 | if (v[6] > 0. && v[6] <= emax || v[6] == 0. && v[7] == 0.) | ~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp: In function ‘int dg7itb_(doublereal*, doublereal*, doublereal*, integer*, integer*, integer*, integer*, integer*, doublereal*, doublereal*, doublereal*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:2092:41: warning: variable ‘rstrst’ set but not used [-Wunused-but-set-variable] 2092 | static integer td1, tg1, lstgst, pp1, rstrst; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp: In function ‘int dparck_(integer*, doublereal*, integer*, integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:6647:15: warning: unused variable ‘vn’ [-Wunused-variable] 6647 | static char vn[4 * 2 * 34] = ""; | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:6663:15: warning: unused variable ‘varnm’ [-Wunused-variable] 6663 | static char varnm[1 * 2] = ""; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:6664:15: warning: unused variable ‘sh’ [-Wunused-variable] 6664 | static char sh[1 * 2] = ""; | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp: In function ‘integer i1mach_(integer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:9778:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 9778 | fprintf(stderr, "invalid argument: i1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp: In function ‘integer i7mdcn_(integer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CNL2SOL.cpp:9833:43: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses] 9833 | ret_val = i1mach_(&mdperm[(0 + (0 + (*k - 1 << 2))) / 4]); | ~~~^~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptLogEntry.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptItem.cpp: In member function ‘void COptItem::updatePrerequisites(const std::vector&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptItem.cpp:519:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 519 | std::vector< COptItem * >::const_iterator it = influencingIntervals.begin(); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptItem.cpp:520:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 520 | std::vector< COptItem * >::const_iterator end = influencingIntervals.end(); | ^~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptLogItem.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodCoranaWalk.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodDE.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodEP.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodCoranaWalk.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodDE.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodDE.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodGA.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodEP.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodEP.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodGA.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodGA.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodGASR.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodHookeJeeves.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodLevenbergMarquardt.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodGASR.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodGASR.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodHookeJeeves.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodHookeJeeves.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodLevenbergMarquardt.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodLevenbergMarquardt.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodLevenbergMarquardt.cpp: In member function ‘virtual bool COptMethodLevenbergMarquardt::optimise()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodLevenbergMarquardt.cpp:132:28: warning: variable ‘nrhs’ set but not used [-Wunused-but-set-variable] 132 | C_INT dim, starts, info, nrhs; | ^~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodNL2SOL.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodNL2SOL.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodNL2SOL.cpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodNelderMead.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp:107: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 107 | #pragma omp critical /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp:120: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 120 | #pragma omp critical /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp:201: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 201 | #pragma omp critical /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp:343: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 343 | #pragma omp critical /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp:625: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 625 | #pragma omp parallel for schedule(runtime) /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp:645: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 645 | #pragma omp parallel for schedule(runtime) In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodNelderMead.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodNelderMead.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPraxis.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSA.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp: In member function ‘bool COptMethodPS::reachedStdDeviation()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPS.cpp:481:15: warning: unused variable ‘pEnd’ [-Wunused-variable] 481 | C_FLOAT64 * pEnd = pValue + mPopulationSize; | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPraxis.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPraxis.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSA.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSA.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPraxis.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPraxis.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPraxis.cpp: In member function ‘virtual bool COptMethodPraxis::optimise()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPraxis.cpp:100:13: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] 100 | C_FLOAT64 tmp = 0.0; | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodPraxis.cpp:101:13: warning: variable ‘machep’ set but not used [-Wunused-but-set-variable] 101 | C_FLOAT64 machep, stepmx, d1, d2; | ^~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSRES.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSRES.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSRES.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSS.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodStatistics.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSteepestDescent.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSS.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSS.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodStatistics.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSS.cpp: In member function ‘bool COptMethodSS::combination()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSS.cpp:820:13: warning: variable ‘la’ set but not used [-Wunused-but-set-variable] 820 | C_FLOAT64 la; // for orders of magnitude | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSS.cpp:827:22: warning: variable ‘xprval’ set but not used [-Wunused-but-set-variable] 827 | C_FLOAT64 xnewval, xprval; // to hold temp value of "parent" in go-beyond strategy | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodStatistics.cpp: In member function ‘virtual bool COptMethodStatistics::optimise()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodStatistics.cpp:93:8: warning: variable ‘Continue’ set but not used [-Wunused-but-set-variable] 93 | bool Continue = true; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSteepestDescent.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodSteepestDescent.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodTruncatedNewton.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodTruncatedNewton.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodTruncatedNewton.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodTruncatedNewton.cpp: In member function ‘int COptMethodTruncatedNewton::sFun(int*, double*, double*, double*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodTruncatedNewton.cpp:328:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 328 | for (size_t i = 0; i < mVariableSize; i++, g++) | ~~^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CPraxis.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CRandomSearch.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:51: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:679:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 679 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:674:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 674 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:84:1: warning: when initialized here [-Wreorder] 84 | COptProblem::COptProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const COptProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:679:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 679 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:674:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 674 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:129:1: warning: when initialized here [-Wreorder] 129 | COptProblem::COptProblem(const COptProblem & src, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp: In member function ‘virtual void COptProblem::calculateValue()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:184:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 184 | std::vector< COptItem * >::const_iterator it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:185:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 185 | std::vector< COptItem * >::const_iterator end = mpOptItems->end(); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp: In member function ‘double COptProblem::evalMinimizeIntervals(const double&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:873:23: warning: unused variable ‘SQRT_EPSILON’ [-Wunused-variable] 873 | static const double SQRT_EPSILON = sqrt(std::numeric_limits< double >::epsilon()); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp: In member function ‘virtual bool COptProblem::setSolution(const double&, const CVector&, const bool&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.cpp:1061:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 1061 | if (variables.size() != 0) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CPraxis.cpp: In member function ‘double CPraxis::operator()(double, double, int, int, double*, FPraxis*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CPraxis.cpp:1097:11: warning: variable ‘seed’ set but not used [-Wunused-but-set-variable] 1097 | C_INT32 seed; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CPraxis.cpp: In member function ‘CPraxis::minfit(int, double, double*, double*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CPraxis.cpp:337:11: warning: ‘f’ may be used uninitialized [-Wmaybe-uninitialized] 337 | if (0.0 <= f) | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CPraxis.cpp:236:13: note: ‘f’ was declared here 236 | C_FLOAT64 f; | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CRandomSearch.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CRealProblem.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CRealProblem.h:53, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CRealProblem.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqn_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp:387:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 387 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp:391:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 391 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp:401:27: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 401 | C_FLOAT64 gnorm, ftest, fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqnbc_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, double*, double*, int*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp:761:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 761 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp:766:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 766 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp:777:13: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 777 | C_FLOAT64 fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp: In function ‘int initp3_(double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/CTruncatedNewton.cpp:2398:13: warning: variable ‘cond’ set but not used [-Wunused-but-set-variable] 2398 | C_FLOAT64 cond; | ^~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/FminBrent.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/output/COutputHandler.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/output/COutputHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/output/COutputHandler.cpp:15: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/output/COutputHandler.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentFileInfo.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.cpp: In member function ‘double CExperiment::getErrorMeanSD(const CObjectInterface*, const double&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.cpp:1673:20: warning: unused variable ‘pScale’ [-Wunused-variable] 1673 | const C_FLOAT64 *pScale = mScale.array() + it->second; | ^~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentObjectMap.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentSet.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentObjectMap.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentObjectMap.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentObjectMap.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentSet.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentSet.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentSet.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentSet.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitItem.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitTask.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitTask.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitTask.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitTask.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual bool CFitProblem::calculate()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp:1075:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1075 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp:1123:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1123 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp:1224:34: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 1224 | auto it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual void CFitProblem::updateContainer(const bool&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.cpp:1362:17: warning: variable ‘pExp’ set but not used [-Wunused-but-set-variable] 1362 | CExperiment * pExp = NULL; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitTask.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotColors.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotItem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/randomGenerator/CPermutation.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/randomGenerator/CRandom.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/randomGenerator/Cmt19937.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/randomGenerator/Cr250.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CKeyFactory.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/COutputAssistant.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.cpp:8: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h: In constructor ‘CDataHandler::CDataHandler(bool)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h: In copy constructor ‘CDataHandler::CDataHandler(const CDataHandler&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.cpp: In member function ‘virtual void CDataHandler::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CDataHandler.cpp:171:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 171 | switch (activity) | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/COutputAssistant.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/COutputAssistant.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/COutputAssistant.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/COutputAssistant.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/COutputAssistant.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/COutputAssistant.cpp:723:57: required from here 723 | CCopasiTask * pTask = &pDataModel->getTaskList()->operator[]("Parameter Estimation"); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReport.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportBody.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinition.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReport.cpp: In member function ‘virtual void CReport::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReport.cpp:136:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 136 | switch (activity) | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinition.h: In constructor ‘CReportDefinition::CReportDefinition(const CReportDefinition&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinition.h:68:20: warning: ‘CReportDefinition::mPrecision’ will be initialized after [-Wreorder] 68 | unsigned C_INT32 mPrecision; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinition.h:60:38: warning: ‘std::vector CReportDefinition::mHeaderVector’ [-Wreorder] 60 | std::vector mHeaderVector; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinition.cpp:142:1: warning: when initialized here [-Wreorder] 142 | CReportDefinition::CReportDefinition(const CReportDefinition & src, | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static REACTION_TYPE CCellDesignerImporter::reactionTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp:4866:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4866 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_LINK_TYPE CCellDesignerImporter::modificationLinkTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp:4954:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4954 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_TYPE CCellDesignerImporter::modificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp:5022:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 5022 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static SPECIES_MODIFICATION_TYPE CCellDesignerImporter::speciesModificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CCellDesignerImporter.cpp:10901:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 10901 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/ConverterASTNode.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:80: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:65, from /usr/include/c++/15/bits/specfun.h:43, from /usr/include/c++/15/cmath:3913, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:25: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:97: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp: In function ‘void addSymbolComponentToUnitDefinition(UnitDefinition*, CUnit::SymbolComponent&, const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:3109:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3109 | if (unitKind != C_INVALID_INDEX && use_d_prefix) /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:3114:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3114 | if (unitKind == C_INVALID_INDEX) /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp: In member function ‘void CSBMLExporter::addInitialAssignmentsToModel(const CDataModel&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:3397:11: warning: unused variable ‘result’ [-Wunused-variable] 3397 | int result = model->addParameter(param); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp: In member function ‘bool CSBMLExporter::createSBMLDocument(CDataModel&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:3741:15: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 3741 | int result; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp: In static member function ‘static XMLNode* CSBMLExporter::createSBMLNotes(const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:8136:31: warning: unused variable ‘tmp’ [-Wunused-variable] 8136 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", prefix); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.cpp:8202:27: warning: unused variable ‘tmp’ [-Wunused-variable] 8202 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", ""); | ^~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLIncompatibility.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp:72: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLReference.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp:79: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp:84: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp:34: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp:98: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp:99: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::replaceAmountReferences(ConverterASTNode*, Model*, double, std::map&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp:3624:43: warning: variable ‘pSpecies’ set but not used [-Wunused-but-set-variable] 3624 | ASTNode *pAvogadro = NULL, *pSpecies = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::applyConversionFactors()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.cpp:7887:25: warning: variable ‘pE’ set but not used [-Wunused-but-set-variable] 7887 | const CChemEqElement* pE = NULL; | ^~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::importUnitsFromSBMLDocument(Model*, CModel*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp:172:24: warning: unused variable ‘pUDef’ [-Wunused-variable] 172 | UnitDefinition * pUDef = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::checkElementUnits(const Model*, CModel*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp:1042:8: warning: variable ‘inconsistentDimensionlessUnits’ set but not used [-Wunused-but-set-variable] 1042 | bool inconsistentDimensionlessUnits = false; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp:1043:8: warning: unused variable ‘defaultVolumeUsed’ [-Wunused-variable] 1043 | bool defaultVolumeUsed = false; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp:1044:8: warning: unused variable ‘defaultAreaUsed’ [-Wunused-variable] 1044 | bool defaultAreaUsed = false; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUnitSupport.cpp:1045:8: warning: unused variable ‘defaultLengthUsed’ [-Wunused-variable] 1045 | bool defaultLengthUsed = false; | ^~~~~~~~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLUtils.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/StdException.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbmlunit/CSBMLunit.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbmlunit/CSBMLunitInterface.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbmlunit/Expression2PresentationMML.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/copasimathml.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbmlunit/Expression2PresentationMML.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbmlunit/Expression2PresentationMMLUnits.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp: In member function ‘bool CScanMethod::loop(size_t)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp:574:10: warning: unused variable ‘failCounter’ [-Wunused-variable] 574 | size_t failCounter = 0; | ^~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanProblem.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp: In member function ‘CScanItemRandom::step()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp:388:22: warning: ‘Value’ may be used uninitialized [-Wmaybe-uninitialized] 388 | *mpObjectValue = Value; | ~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.cpp:339:13: note: ‘Value’ was declared here 339 | C_FLOAT64 Value; | ^~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanTask.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.h:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanTask.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanTask.cpp:256:48: required from here 256 | (&pDataModel->getTaskList()->operator[]("Steady-State")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensMethod.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensMethod.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensMethod.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensMethod.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensMethod.cpp:492:48: required from here 492 | (&pDataModel->getTaskList()->operator[]("Steady-State")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensMethod.cpp: In member function ‘bool CSensMethod::initialize(CSensProblem*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensMethod.cpp:484:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 484 | switch (mpProblem->getSubTaskType()) | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.cpp:298:34: required from here 298 | CDataVectorN< CCopasiTask >::iterator it = pDataModel->getTaskList()->begin(); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector CSensProblem::getPossibleTargetFunctions(SubTaskType)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.cpp:480:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 480 | switch (type) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector CSensProblem::getPossibleVariables(SubTaskType)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.cpp:548:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 548 | switch (type) | ^ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CEigen.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensTask.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensTask.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensTask.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensTask.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensTask.cpp: In member function ‘virtual bool CSensTask::process(const bool&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensTask.cpp:106:17: warning: unused variable ‘pProblem’ [-Wunused-variable] 106 | CSensProblem* pProblem = | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAProblem.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAProblem.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAProblem.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAProblem.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAProblem.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAProblem.cpp:103:75: required from here 103 | pSubTask = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.h:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp: In member function ‘void CMCAMethod::calculateUnscaledElasticities(double)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp:226:32: warning: unused variable ‘TransientDependencies’ [-Wunused-variable] 226 | const CMathDependencyGraph & TransientDependencies = mpContainer->getTransientDependencies(); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp:229:17: warning: unused variable ‘pParticleFluxObjectEnd’ [-Wunused-variable] 229 | CMathObject * pParticleFluxObjectEnd = pParticleFluxObject + numReacs; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp:231:17: warning: unused variable ‘pSpeciesObjectEnd’ [-Wunused-variable] 231 | CMathObject * pSpeciesObjectEnd = pSpeciesObjectStart + numMetabs; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::calculateUnscaledConcentrationCC()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp:330:9: warning: unused variable ‘N’ [-Wunused-variable] 330 | C_INT N = (C_INT) aux2.numRows(); | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::scaleMCA(const bool&, double)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.cpp:394:10: warning: unused variable ‘numReacs’ [-Wunused-variable] 394 | size_t numReacs = mpContainer->getParticleFluxes().size(); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateProblem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateProblem.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateProblem.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:235: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:54:1: warning: when initialized here [-Wreorder] 54 | CNewtonMethod::CNewtonMethod(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CNewtonMethod&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CNewtonMethod::CNewtonMethod(const CNewtonMethod & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp: In member function ‘std::string CNewtonMethod::targetValueToString() const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 685 | switch (mTargetCriterion) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:907:69: required from here 907 | dynamic_cast< CTrajectoryTask * >(&pDataModel->getTaskList()->operator[]("Time-Course")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp: In member function ‘virtual bool CNewtonMethod::initialize(const CSteadyStateProblem*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CNewtonMethod.cpp:860:23: warning: variable ‘pTrajectoryMethod’ set but not used [-Wunused-but-set-variable] 860 | CTrajectoryMethod * pTrajectoryMethod = NULL; | ^~~~~~~~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensLsodaMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensLsodaMethod.cpp:14: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensLsodaMethod.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensLsodaMethod.cpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensLsodaMethod.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensLsodaMethod.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.h:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensLsodaMethod.cpp: In member function ‘virtual void CTimeSensLsodaMethod::start()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensLsodaMethod.cpp:565:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 565 | for (i = mSystemSize + 1; i < mData.dim; ++i) | ~~^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.h:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensMethod.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensProblem.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensTask.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensProblem.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensProblem.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensProblem.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensProblem.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensTask.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensTask.h:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensTask.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.h:56, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.cpp:54: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.cpp:56: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.h:64: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.h:65: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensTask.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.cpp:64: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.cpp: In member function ‘void CHybridMethod::calculateDerivative(CVectorCore&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.cpp:407:11: warning: unused variable ‘bal’ [-Wunused-variable] 407 | C_INT32 bal = 0; | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.cpp:50: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.cpp:51: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.cpp:64: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.cpp:65: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CHybridMethodODE45::CHybridMethodODE45(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.cpp:141:1: warning: when initialized here [-Wreorder] 141 | CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45 & src, | ^~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionRKMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionLSODAMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionRKMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionRKMethod.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionRKMethod.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionRKMethod.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethod.h:65: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionRKMethod.cpp: In member function ‘virtual void CHybridNextReactionRKMethod::integrateDeterministicPart(double)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridNextReactionRKMethod.cpp:96:22: warning: unused variable ‘react’ [-Wunused-variable] 96 | CHybridStochFlag * react = NULL; | ^~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRadau5Method.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRootFinder.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.h:12, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.cpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.cpp:28:1: warning: when initialized here [-Wreorder] 28 | CLsodaMethod2::CLsodaMethod2(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.cpp:61:1: warning: when initialized here [-Wreorder] 61 | CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2 & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.cpp: In member function ‘virtual CTrajectoryMethod::Status CLsodaMethod2::step(const double&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod2.cpp:150:13: warning: unused variable ‘StartTime’ [-Wunused-variable] 150 | C_FLOAT64 StartTime = mTime; | ^~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRadau5Method.cpp:12: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRadau5Method.cpp:8: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRadau5Method.cpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRungeKutta.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::doOneStep()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRungeKutta.cpp:431:10: warning: unused variable ‘s’ [-Wunused-variable] 431 | size_t s = mStage - 1; | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::setInitialStepSize()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRungeKutta.cpp:710:13: warning: unused variable ‘absT’ [-Wunused-variable] 710 | C_FLOAT64 absT = fabs(mTLeft); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::checkRoots()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRungeKutta.cpp:802:15: warning: unused variable ‘pLeftRoots’ [-Wunused-variable] 802 | C_FLOAT64 * pLeftRoots = mRootValuesLeft; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CRungeKutta.cpp:805:15: warning: unused variable ‘pRightRoots’ [-Wunused-variable] 805 | C_FLOAT64 * pRightRoots = mRootValueRight; | ^~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochDirectMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochNextReactionMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochasticRungeKuttaRI5.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochDirectMethod.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochDirectMethod.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochDirectMethod.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochDirectMethod.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochDirectMethod.cpp:50: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochDirectMethod.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochDirectMethod.cpp:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochMethod.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochMethod.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochMethod.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochMethod.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochMethod.cpp:50: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochNextReactionMethod.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochNextReactionMethod.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochNextReactionMethod.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochasticRungeKuttaRI5.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CStochasticRungeKuttaRI5.h:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.cpp:49: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.cpp: In member function ‘bool CTauLeapMethod::updateSystem()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.cpp:365:21: warning: unused variable ‘pKEnd’ [-Wunused-variable] 365 | const C_FLOAT64 * pKEnd = pK + mNumReactions; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.cpp: In member function ‘virtual bool CTimeSeries::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.cpp:181:14: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 181 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajAdaptiveSA.cpp:70:1: warning: when initialized here [-Wreorder] 70 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA & src, | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CHybridMethodODE45.h:54, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.cpp:49: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:211:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 211 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:206:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 206 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.cpp:48:1: warning: when initialized here [-Wreorder] 48 | CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:211:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 211 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:206:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 206 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.cpp:71:1: warning: when initialized here [-Wreorder] 71 | CTrajectoryProblem::CTrajectoryProblem(const CDataContainer * pParent): | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:211:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 211 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.h:206:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 206 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryProblem.cpp:94:1: warning: when initialized here [-Wreorder] 94 | CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem & src, | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp:49: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp:56: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/locale:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp:25: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp:60: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.cpp:611:104: required from here 611 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterC.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.cpp:25: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.cpp:54: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterBM.cpp:73:94: required from here 73 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterC.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterC.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterC.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.cpp:25: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterC.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterC.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterC.cpp:25: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.cpp:54: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterC.cpp:54: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tss/CODEExporterXPPAUT.cpp:71:94: required from here 71 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp: In member function ‘int CCSPMethod::isBlockDiagonal(int, int, const CMatrix&, const double&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp:782:15: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp:782:21: warning: variable ‘jmax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp:782:27: warning: variable ‘imaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CCSPMethod.cpp:782:34: warning: variable ‘jmaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘virtual void CILDMMethod::step(const double&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp:108:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 108 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp:223:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 223 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘void CILDMMethod::deuflhard(int&, int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp:886:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 886 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMMethod.cpp:1029:13: warning: variable ‘max1’ set but not used [-Wunused-but-set-variable] 1029 | C_FLOAT64 max1; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘virtual void CILDMModifiedMethod::step(const double&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:117:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 117 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:179:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 179 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:224:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 224 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::deuflhard_metab(int&, int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:508:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 508 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_new(int*, int&, int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:620:25: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 620 | C_INT nrhs, ok, fast, flag_newton; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_for_timestep(int, double&, int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CILDMModifiedMethod.cpp:848:27: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 848 | C_INT i, iter, itermax, flag_newton; | ^~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_mod_space(int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp:407:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 407 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space(int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp:465:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 465 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space_thomas(int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp:523:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 523 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::sylvester(int, int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.cpp:1645:9: warning: variable ‘flag_sylvester’ set but not used [-Wunused-but-set-variable] 1645 | C_INT flag_sylvester; | ^~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAProblem.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAProblem.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAProblem.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAProblem.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAProblem.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAProblem.cpp:259:88: required from here 259 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time Scale Separation Analysis")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator==(const CDataValue&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp:322:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 322 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator!=(const CDataValue&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp:362:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 362 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::allocateData(const Type&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp:416:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 416 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::deleteData()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp:466:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 466 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::assignData(const CDataValue&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp:510:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 510 | switch (rhs.mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CDataValue&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp:626:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 626 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp: In function ‘std::istream& operator>>(std::istream&, CDataValue&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CDataValue.cpp:707:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 707 | switch (i.mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoObjectInterface.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoStack.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitParser_yacc.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:15: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘void CUndoData::CChangeSet::add(const CUndoData::ChangeInfo&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:67:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 67 | switch (Info.type) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CUndoObjectInterface*, const size_t&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:207:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 207 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CData&, const size_t&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:252:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 252 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:320:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 320 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&, const CDataValue&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:354:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 354 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::isSetProperty(const std::string&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 422 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::apply(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:555:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 555 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::undo(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:577:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 577 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectDisplayName() const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:649:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 649 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:666:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 666 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectType() const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:696:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 696 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::operator<(const CUndoData&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:715:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 715 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:753:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 753 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp: In member function ‘const CData& CUndoData::getData(const bool&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undo/CUndoData.cpp:977:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 977 | switch (mType) | ^ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitParser_lex.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CBaseUnit.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CBrent.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiException.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMessage.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual CData CCopasiParameter::toData() const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp:105:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 105 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual void CCopasiParameter::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp:185:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 185 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCopasiParameter&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp:419:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 419 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::createValue()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp:534:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 534 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::assignValidValues(const void*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp:602:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 602 | switch (mType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValue(const Type&, void*&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp:667:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 667 | switch (type) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::assignValue(const Type&, void*&, const void*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp:719:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 719 | switch (type) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValidValues(const Type&, void*&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.cpp:813:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 813 | switch (type) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameterGroup.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameterGroup.cpp: In member function ‘virtual void CCopasiParameterGroup::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameterGroup.cpp:236:22: warning: unused variable ‘pParameter’ [-Wunused-variable] 236 | CCopasiParameter * pParameter; | ^~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h: In constructor ‘CCopasiTask::CCopasiTask()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:524:24: warning: ‘CCopasiTask::mInitialState’ will be initialized after [-Wreorder] 524 | CVector< C_FLOAT64 > mInitialState; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.h:518:20: warning: ‘CMathContainer* CCopasiTask::mpContainer’ [-Wreorder] 518 | CMathContainer * mpContainer; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.cpp:268:1: warning: when initialized here [-Wreorder] 268 | CCopasiTask::CCopasiTask() | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.cpp: In member function ‘virtual void CCopasiTask::separate(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTask.cpp:694:12: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 694 | switch (activity) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTaskStatus.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CDependencyGraph.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CDirEntry.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CExpressionGenerator.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CIndexedPriorityQueue.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLeastSquareSolution.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CExpressionGenerator.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CExpressionGenerator.cpp: In static member function ‘static std::string CExpressionGenerator::generate(Operation, const std::vector&, bool)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for (int i = 1; i < objects.size(); ++i) | ~~^~~~~~~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CFlags.h:17, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CCore.h:83, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CObjectInterface.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CExpressionGenerator.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CExpressionGenerator.cpp:6: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CEnumAnnotation.h: In instantiation of ‘std::vector CEnumAnnotation::annotations() const [with Type = std::__cxx11::basic_string; Enum = CExpressionGenerator::Operation]’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CExpressionGenerator.cpp:71:36: required from here 71 | return OperationNames.annotations(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CEnumAnnotation.h:114:42: warning: loop variable ‘a’ of type ‘const std::pair, CExpressionGenerator::Operation>&’ binds to a temporary constructed from type ‘const std::pair, CExpressionGenerator::Operation>’ [-Wrange-loop-construct] 114 | for (const std::pair< Type, Enum > & a : mMap) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CEnumAnnotation.h:114:42: note: use non-reference type ‘const std::pair, CExpressionGenerator::Operation>’ to make the copy explicit or ‘const std::pair, CExpressionGenerator::Operation>&’ to prevent copying In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CParameterEstimationUtils.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:11: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProblemFactory.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CParameterEstimationUtils.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CParameterEstimationUtils.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/elementaryFluxModes/CBitPatternMethod.h:17, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:12: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::create(const CTaskEnum::Task&, const CTaskEnum::Method&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 80 | switch (methodType) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::copy(const CCopasiMethod*, const CDataContainer*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 288 | switch (pSrc->getSubType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CParameterEstimationUtils.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CParameterEstimationUtils.cpp:193:34: required from here 193 | for (size_t i = 0; i < taskList.size(); i++) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CParameterEstimationUtils.cpp: In static member function ‘static FittingItem* ResultParser::parseItem(const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CParameterEstimationUtils.cpp:481:16: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 481 | if (firstLeq == -1) | ~~~~~~~~~^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CParameterEstimationUtils.cpp:488:14: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 488 | if (square == -1) | ~~~~~~~^~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CReadConfig.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProblemFactory.cpp:14: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProblemFactory.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSlider.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSparseMatrix.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CTableCell.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSlider.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSlider.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSlider.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSparseMatrix.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:65, from /usr/include/c++/15/algorithm:62, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSparseMatrix.cpp:31: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSlider.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CTaskEnum.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CTaskFactory.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitComponent.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinition.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CTaskFactory.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CTaskFactory.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitParser.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinition.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinition.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.cpp: In member function ‘virtual bool CUnitDefinitionDB::add(const CUnitDefinition&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.cpp:46:21: warning: variable ‘pCopy’ set but not used [-Wunused-but-set-variable] 46 | CUnitDefinition * pCopy = NULL; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitParser.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitParser.h: In constructor ‘CUnitParserBase::CUnitParserBase()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitParser.h:81:20: warning: ‘CUnitParserBase::mPosition’ will be initialized after [-Wreorder] 81 | unsigned C_INT32 mPosition; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitParser.h:80:10: warning: ‘CUnit* CUnitParserBase::mpUnit’ [-Wreorder] 80 | CUnit *mpUnit; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitParser.cpp:20:1: warning: when initialized here [-Wreorder] 20 | CUnitParserBase::CUnitParserBase(): | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CValidatedUnit.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CValidatedUnit.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CValidity.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CVersion.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::add(const CIssue&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CValidity.cpp:277:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 277 | switch (issue.getSeverity()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::remove(const CIssue&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CValidity.cpp:316:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 316 | switch (issue.getSeverity()) | ^ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 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copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CluX.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/Cmd5.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/dgemm.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/utility.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CExpat.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/utility.cpp: In function ‘ISODateTime[abi:cxx11](tm*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/utility.cpp:50:24: warning: ‘%.02d’ directive writing between 2 and 11 bytes into a region of size between 8 and 18 [-Wformat-overflow=] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/utility.cpp:50:20: note: directive argument in the range [-2147483647, 2147483647] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from /usr/include/c++/15/cstdio:47, from /usr/include/c++/15/ext/string_conversions.h:47, from /usr/include/c++/15/bits/basic_string.h:4227, from /usr/include/c++/15/string:56, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/utility.cpp:28: In function ‘sprintf’, inlined from ‘ISODateTime[abi:cxx11](tm*)’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/utility.cpp:50:14: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 17 and 72 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CFixLocalReactionParameters.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:55: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:57: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:67: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:69: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:304:7: required from here 304 | pdelete(mpTaskList); | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp: In member function ‘bool CCopasiXML::saveModel()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXML.cpp:1042:28: warning: unused variable ‘pDataModel’ [-Wunused-variable] 1042 | CDataModel * pDataModel = Assignments.getObjectDataModel(); | ^~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CFixLocalReactionParameters.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/AssignmentHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/BoundingBoxHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/AssignmentHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/AssignmentHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/COPASIHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/COPASIHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/COPASIHandler.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/COPASIHandler.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/COPASIHandler.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/COPASIHandler.cpp:79:28: required from here 79 | mpData->pTaskList->clear(); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/COPASIHandler.cpp:181:34: required from here 181 | mpData->pFunctionList->getIndex("Objective Function") != C_INVALID_INDEX) | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp: In member function ‘CXMLHandler* CXMLHandlerFactory::createHandler(const CXMLHandler::Type&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘AFTER’ not handled in switch [-Wswitch] 137 | switch (type) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint1’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Body’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘CurveSegment’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘DelayExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘End’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Expression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Footer’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Header’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘InitialExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘NoiseExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Position’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘PriorityExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Problem’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Start’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Text’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘TriggerExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Unit’ not handled in switch [-Wswitch] [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParserData.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParserData.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParserData.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.cpp:49: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.cpp:63: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CallParameterHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ChannelSpecHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CharacterDataHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ChannelSpecHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ChannelSpecHandler.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ColorDefinitionHandler.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CommentHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ColorDefinitionHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CompartmentGlyphHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CompartmentHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CompartmentGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CompartmentGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CompartmentGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CompartmentHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CompartmentHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ConstantHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CubicBezierHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CurveHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ConstantHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ConstantHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/DimensionsHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/EllipseHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/EventHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/FunctionHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/GUIHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/EllipseHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/EventHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/EventHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/FunctionHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/FunctionHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/FunctionHandler.cpp:96:42: required from here 96 | Index = mpData->pFunctionList->getIndex(Name); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/GradientStopHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/GroupHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ImageHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/GradientStopHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/InitialStateHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/GroupHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/KineticLawHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/LayoutHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/KineticLawHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/KineticLawHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/LineEndingHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/LineSegmentHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/LayoutHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/LayoutHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/LinearGradientHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/LineEndingHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ListOfCurveSegmentsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ListOfHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/LinearGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ListOfLayoutsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MathMLHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MetaboliteGlyphHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MetaboliteHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MetaboliteGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MetaboliteGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MetaboliteGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MethodHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MiriamAnnotationHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MetaboliteHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/MetaboliteHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterGroupHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterSetHandler.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterGroupHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterGroupHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelValueHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterSetHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelParameterSetHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModifierHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ObjectHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelValueHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModelValueHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ParameterDescriptionHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModifierHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ModifierHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ParameterGroupHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ParameterHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ParameterTextHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ParameterDescriptionHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ParameterDescriptionHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/PlotItemHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/PlotSpecificationHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/PointHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/PlotSpecificationHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/PolygonHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ProductHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RadialGradientHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReactionGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/PolygonHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ProductHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ProductHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RadialGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReactionHandler.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RectangleHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReactionGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReactionGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReactionGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RenderCurveElementHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RenderCurveHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RectangleHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReactionHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReactionHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RenderInformationHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RenderCurveHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RenderTextHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReportDefinitionHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReportSectionHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RenderInformationHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/RenderTextHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReportDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReportTargetHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReportSectionHandler.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/ReportSectionHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SBMLMapHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SliderHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SourceParameterHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SBMLMapHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SBMLMapHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SBMLMapHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SliderHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SliderHandler.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SourceParameterHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SourceParameterHandler.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/StateTemplateHandler.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/StateTemplateVariableHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/StyleHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SubstrateHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TableHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/StyleHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SubstrateHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/SubstrateHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TaskHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TableHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TableHandler.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TextGlyphHandler.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/UNKNOWNHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TaskHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TaskHandler.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/UnitDefinitionHandler.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TaskHandler.cpp:67:52: required from here 67 | mpData->pCurrentTask = CTaskFactory::create(Type, mpData->pTaskList); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TextGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TextGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/TextGlyphHandler.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/UnsupportedAnnotationHandler.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/UnitDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/xml/parser/UnitDefinitionHandler.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp:410:75: required from here 410 | CScanTask* pTask = dynamic_cast(&mpDataModel->getTaskList()->operator[]("Scan")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createScanTask()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp:450:8: warning: unused variable ‘result’ [-Wunused-variable] 450 | bool result = exportNthScanItem(pProblem, numItems - 1, task); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createSteadyStateTask()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/CSEDMLExporter.cpp:638:23: warning: unused variable ‘tProblem’ [-Wunused-variable] 638 | CTrajectoryProblem* tProblem = static_cast(pTask->getProblem()); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:25: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:68: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static const CDataObject* SEDMLUtils::resolveVariable(CModel*, const SedVariable*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.cpp:337:25: warning: unused variable ‘pReaction’ [-Wunused-variable] 337 | const CReaction * pReaction = dynamic_cast< const CReaction * >(obj); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static int SEDMLUtils::getAlphaFromRgba(const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.cpp:665:7: warning: unused variable ‘offset’ [-Wunused-variable] 665 | int offset = rgba[0] == '#' ? 1 : 0; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.h: In constructor ‘VariableInfo::VariableInfo(const CDataObject*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.h:74:23: warning: ‘VariableInfo::mpObject’ will be initialized after [-Wreorder] 74 | const CDataObject * mpObject; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.h:72:8: warning: ‘bool VariableInfo::mIsValid’ [-Wreorder] 72 | bool mIsValid; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLUtils.cpp:808:1: warning: when initialized here [-Wreorder] 808 | VariableInfo::VariableInfo(const CDataObject * pObject) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:168:22: required from here 168 | if (pTaskList->getIndex("Time-Course") == C_INVALID_INDEX) | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp: In member function ‘void SEDMLImporter::importOutputs()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:465:18: warning: unused variable ‘logX’ [-Wunused-variable] 465 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:466:18: warning: unused variable ‘logY’ [-Wunused-variable] 466 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:499:18: warning: unused variable ‘logX’ [-Wunused-variable] 499 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:500:18: warning: unused variable ‘logY’ [-Wunused-variable] 500 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:424:46: warning: unused variable ‘copasiMap’ [-Wunused-variable] 424 | std::map< const CDataObject *, SBase * > & copasiMap = pModel->getObjectDataModel()->getCopasi2SBMLMap(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sedml/SEDMLImporter.cpp:426:29: warning: unused variable ‘pReports’ [-Wunused-variable] 426 | CReportDefinitionVector * pReports = mpDataModel->getReportDefinitionList(); | ^~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [ 36%] Built target libCOPASISE-core /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-static.dir/build.make copasi/CMakeFiles/libCOPASISE-static.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CMakeFiles/libCOPASISE-static.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-static.dir/build.make copasi/CMakeFiles/libCOPASISE-static.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [ 36%] Linking CXX static library libCOPASISE.a cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/cmake -P CMakeFiles/libCOPASISE-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/cmake -E cmake_link_script 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-DLIBCOMBINE_CPP_NAMESPACE_END= -DLIBCOMBINE_CPP_NAMESPACE_QUALIFIER= -features autodoc,1 -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/python.i gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' /usr/bin/gmake -f copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build.make copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build /usr/bin/gmake -f copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build.make copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [ 36%] Generating wizard/ui_wizard.h [ 36%] Building CXX object copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -MF CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o.d -o CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard/ui_wizard.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard/wizard.ui [ 36%] Building CXX object copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -MF CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o.d -o CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW/SBWTranslator.cpp [ 36%] Generating MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQCreatorDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQCreatorDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQMiriamWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQModifiedDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQModifiedDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeView.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeViewItem.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQRDFTreeViewItem.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating MIRIAMUI/moc_CQReferenceDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQReferenceDM.cpp_parameters [ 37%] Generating MIRIAMUI/ui_CQMiriamWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/ui_CQMiriamWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQMiriamWidget.ui [ 37%] Generating MIRIAMUI/ui_CQRDFTreeView.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/ui_CQRDFTreeView.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQRDFTreeView.ui [ 37%] Generating UI/moc_AboutDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_AboutDialog.cpp_parameters [ 37%] Generating UI/moc_CColorScale.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CColorScale.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CColorScale.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating UI/moc_CCopasiPlot2YSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiPlotSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CCopasiSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CCopasiSelectionWidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CLNAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CLNAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CMCAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CMCAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CProgressBar.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CProgressBar.cpp_parameters [ 38%] Generating UI/moc_CQAnalyticsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQAnalyticsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQArrayAnnotationsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidgetDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp_parameters [ 38%] Generating UI/moc_CQBaseDataModel.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQBaseDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBaseTreeDataModel.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQBaseTreeDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPane.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQBrowserPane.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPaneDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQBrowserPaneDM.cpp_parameters [ 38%] Generating UI/moc_CQCheckModelWindow.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCheckModelWindow.cpp_parameters [ 38%] Generating UI/moc_CQComboDelegate.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQComboDelegate.cpp_parameters [ 38%] Generating UI/moc_CQCompartment.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCompartment.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentCopyOptions.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCompartmentCopyOptions.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCompartmentDM.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCompartmentsWidget.cpp_parameters [ 39%] Generating UI/moc_CQCopasiApplication.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCopasiApplication.cpp_parameters [ 39%] Generating UI/moc_CQCrossSectionTaskWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCrossSectionTaskWidget.cpp_parameters [ 39%] Generating UI/moc_CQDateTimeEditDelegate.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQDateTimeEditDelegate.cpp_parameters [ 39%] Generating UI/moc_CQDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQDependenciesWidget.cpp_parameters [ 39%] Generating UI/moc_CQDependencyDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQDependencyDialog.cpp_parameters [ 39%] Generating UI/moc_CQDependencyWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQDependencyWidget.cpp_parameters [ 39%] Generating UI/moc_CQDifferentialEquations.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQDifferentialEquations.cpp_parameters [ 39%] Generating UI/moc_CQEFMListWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEFMListWidget.cpp_parameters [ 39%] Generating UI/moc_CQEFMNetReactionDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEFMNetReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMReactionDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEFMReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMResultWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEFMResultWidget.cpp_parameters [ 39%] Generating UI/moc_CQEFMSpeciesDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEFMSpeciesDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEFMWidget.cpp_parameters [ 39%] Generating UI/moc_CQEventDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEventDM.cpp_parameters [ 40%] Generating UI/moc_CQEventWidget1.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEventWidget1.cpp_parameters [ 40%] Generating UI/moc_CQEventsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEventsWidget.cpp_parameters [ 40%] Generating UI/moc_CQExpandModelData.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExpandModelData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentData.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExperimentData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentSelection.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExperimentSelection.cpp_parameters [ 40%] Generating UI/moc_CQExpressionMmlStackedWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp_parameters [ 40%] Generating UI/moc_CQExpressionWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExpressionWidget.cpp_parameters In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ [ 40%] Generating UI/moc_CQFittingItemWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFittingItemWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQFittingResult.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFittingResult.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 40%] Generating UI/moc_CQFittingResultTab1.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFittingResultTab1.cpp_parameters [ 40%] Generating UI/moc_CQFittingWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFittingWidget.cpp_parameters [ 40%] Generating UI/moc_CQFluxModeDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFluxModeDM.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 40%] Generating UI/moc_CQFunctionDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFunctionDM.cpp_parameters In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 41%] Generating UI/moc_CQFunctionsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFunctionsWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ [ 41%] Generating UI/moc_CQGlobalQuantitiesWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ [ 41%] Generating UI/moc_CQGlobalQuantityDM.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQGlobalQuantityDM.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 41%] Generating UI/moc_CQLNAWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQLNAWidget.cpp_parameters [ 41%] Generating UI/moc_CQLayoutsDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQLayoutsDM.cpp_parameters In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW/SBWTranslator.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 41%] Generating UI/moc_CQLayoutsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQLayoutsWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 41%] Generating UI/moc_CQLyapResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp:57: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp:31: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQLyapResultWidget.cpp_parameters [ 41%] Generating UI/moc_CQLyapWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQLyapWidget.cpp_parameters [ 41%] Generating UI/moc_CQMCAWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMCAWidget.cpp_parameters [ 41%] Generating UI/moc_CQMathMatrixWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMathMatrixWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp:525:25: required from here 525 | size_t imax = TaskList.size(); | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp: In function ‘int runScheduledTasks(CProcessReport*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp:525:10: warning: unused variable ‘imax’ [-Wunused-variable] 525 | size_t imax = TaskList.size(); | ^~~~ [ 41%] Generating UI/moc_CQMatrixDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMatrixDialog.cpp_parameters [ 41%] Generating UI/moc_CQMergingData.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMergingData.cpp_parameters [ 41%] Generating UI/moc_CQMessageBox.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMessageBox.cpp_parameters [ 41%] Generating UI/moc_CQMmlScrollView.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMmlScrollView.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 42%] Generating UI/moc_CQModelValue.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQModelValue.cpp_parameters In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 42%] Generating UI/moc_CQModelWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQModelWidget.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskResult.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMoietiesTaskResult.cpp_parameters In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 42%] Generating UI/moc_CQMoietiesTaskWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMoietiesTaskWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ [ 42%] Generating UI/moc_CQMultipleSelectionDialog.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMultipleSelectionDialog.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 42%] Generating UI/moc_CQNameSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQNameSelectionDialog.cpp_parameters [ 42%] Generating UI/moc_CQNotes.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQNotes.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 42%] Generating UI/moc_CQOptPopulation.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQOptPopulation.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 42%] Generating UI/moc_CQOptimizationResult.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQOptimizationResult.cpp_parameters [ 42%] Generating UI/moc_CQOptimizationWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQOptimizationWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 42%] Generating UI/moc_CQOscillationTaskWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQOscillationTaskWidget.cpp_parameters [ 42%] Generating UI/moc_CQParameterEstimationResult.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterEstimationResult.cpp_parameters [ 42%] Generating UI/moc_CQParameterGroupDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTaskTypes.h:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterGroupDM.cpp_parameters In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ [ 43%] Generating UI/moc_CQParameterGroupView.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterGroupView.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterOverviewDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterOverviewWidget.cpp_parameters [ 43%] Generating UI/moc_CQParameterResultItemModel.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterResultItemModel.cpp_parameters ../swig/CDataVector.i:310: Warning 404: Duplicate template instantiation of 'vector< CRegisteredCommonName >' with name 'ReportItemVector' ignored, ../swig/CCommonName.i:46: Warning 404: previous instantiation of 'vector< CRegisteredCommonName >' with name 'ReportItemVector'. /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterResultItemModel.h:0: Note: No relevant classes found. No output generated. [ 43%] Generating UI/moc_CQParameterSetsDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterSetsDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterSetsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterSetsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPlotDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQPlotDM.cpp_parameters [ 43%] Generating UI/moc_CQPlotsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQPlotsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPreferenceDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQPreferenceDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQProgressDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressItem.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQProgressItem.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemBar.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQProgressItemBar.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemText.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQProgressItemText.cpp_parameters [ 44%] Generating UI/moc_CQPushButtonDelegate.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQPushButtonDelegate.cpp_parameters [ 44%] Generating UI/moc_CQReactionDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQReactionDM.cpp_parameters [ 44%] Generating UI/moc_CQReactionsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQReactionsWidget.cpp_parameters [ 44%] Generating UI/moc_CQReportDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQReportDM.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 44%] Generating UI/moc_CQReportDefinition.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQReportDefinition.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinitionSelect.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQReportDefinitionSelect.cpp_parameters [ 44%] Generating UI/moc_CQReportListItem.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQReportListItem.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportListItem.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQReportsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQReportsWidget.cpp_parameters [ 44%] Generating UI/moc_CQSBMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSBMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSBMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSEDMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSEDMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLImportDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSEDMLImportDialog.cpp_parameters [ 44%] Generating UI/moc_CQScanWidgetParameterSet.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQScanWidgetParameterSet.cpp_parameters [ 44%] Generating UI/moc_CQScrolledDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQScrolledDependenciesWidget.cpp_parameters [ 44%] Generating UI/moc_CQSensResultWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSensResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQSimpleSelectionTree.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSimpleSelectionTree.cpp_parameters [ 45%] Generating UI/moc_CQSortFilterProxyModel.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSortFilterProxyModel.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSortFilterProxyModel.h:0: Note: No relevant classes found. No output generated. [ 45%] Generating UI/moc_CQSpecieDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSpecieDM.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesDetail.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSpeciesDetail.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSpeciesWidget.cpp_parameters [ 45%] Generating UI/moc_CQSpinBoxDelegate.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSpinBoxDelegate.cpp_parameters [ 45%] Generating UI/moc_CQSplashWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSplashWidget.cpp_parameters [ 45%] Generating UI/moc_CQStartValueReset.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQStartValueReset.cpp_parameters [ 45%] Generating UI/moc_CQSteadyStateResult.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSteadyStateResult.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultSubWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTSSAResultSubWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTSSAResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSATimeScaleWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTSSATimeScaleWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTSSAWidget.cpp_parameters [ 46%] Generating UI/moc_CQTabWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTabWidget.cpp_parameters [ 46%] Generating UI/moc_CQTableView.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTableView.cpp_parameters [ 46%] Generating UI/moc_CQTableWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTableWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTableWidget.h:0: Note: No relevant classes found. No output generated. ../swig/COptProblem.i:39: Warning 404: Duplicate template instantiation of 'CVector< double >' with name 'FloatCVector' ignored, ../swig/CVector.i:122: Warning 404: previous instantiation of 'CVector< double >' with name 'FloatVector'. [ 46%] Generating UI/moc_CQTaskBtnWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTaskBtnWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskHeaderWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTaskHeaderWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskMethodWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTaskMethodWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskThread.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTaskThread.cpp_parameters [ 46%] Generating UI/moc_CQTextDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTextDialog.cpp_parameters [ 46%] Generating UI/moc_CQThread.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQThread.cpp_parameters [ 46%] Generating UI/moc_CQTimeSensWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTimeSensWidget.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTimeSeriesDM.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTimeSeriesWidget.cpp_parameters [ 46%] Generating UI/moc_CQTrajectoryWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQTrajectoryWidget.cpp_parameters [ 46%] Generating UI/moc_CQUndoTester.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQUndoTester.cpp_parameters [ 47%] Generating UI/moc_CQUnitDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQUnitDM.cpp_parameters [ 47%] Generating UI/moc_CQUnitDetail.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQUnitDetail.cpp_parameters [ 47%] Generating UI/moc_CQUnitsWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQUnitsWidget.cpp_parameters [ 47%] Generating UI/moc_CQUpdateAvogadro.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQUpdateAvogadro.cpp_parameters [ 47%] Generating UI/moc_CQUpdatesWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQUpdatesWidget.cpp_parameters [ 47%] Generating UI/moc_CQValidator.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQValidator.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CQValidatorUnit.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQValidatorUnit.cpp_parameters [ 47%] Generating UI/moc_CScanContainerWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CScanContainerWidget.cpp_parameters [ 47%] Generating UI/moc_CScanItemData.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CScanItemData.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanItemData.h:0: Note: No relevant classes found. No output generated. /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp: In function ‘exportSBML()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE/CopasiSE.cpp:827:27: warning: ‘SBMLSchema’ may be used uninitialized [-Wmaybe-uninitialized] 827 | copasi::SBMLSchema_enum SBMLSchema; | ^~~~~~~~~~ [ 47%] Generating UI/moc_CScanWidgetRandom.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CScanWidgetRandom.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetRepeat.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CScanWidgetRepeat.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetScan.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CScanWidgetScan.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetTask.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CScanWidgetTask.cpp_parameters [ 48%] Generating UI/moc_CUpDownSubwidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CUpDownSubwidget.cpp_parameters [ 48%] Generating UI/moc_CWindowInterface.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CWindowInterface.cpp_parameters [ 48%] Generating UI/moc_ChemEqValidator.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ChemEqValidator.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ChemEqValidator.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiFileDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CopasiFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CopasiFileDialog.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiGuiTypes.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CopasiGuiTypes.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CopasiGuiTypes.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiSlider.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CopasiSlider.cpp_parameters [ 48%] Generating UI/moc_DataModelGUI.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_DataModelGUI.cpp_parameters [ 48%] Generating UI/moc_DefaultplotDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_DefaultplotDialog.cpp_parameters [ 48%] Generating UI/moc_FunctionWidget1.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_FunctionWidget1.cpp_parameters [ 48%] Generating UI/moc_MyLineEdit.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_MyLineEdit.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ObjectBrowserDialog.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserItem.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ObjectBrowserItem.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ObjectBrowserItem.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_ObjectBrowserWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ObjectBrowserWidget.cpp_parameters [ 49%] Generating UI/moc_ReactionsWidget1.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ReactionsWidget1.cpp_parameters [ 49%] Generating UI/moc_ScanWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ScanWidget.cpp_parameters [ 49%] Generating UI/moc_SensWidgetComboBox.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_SensWidgetComboBox.cpp_parameters [ 49%] Generating UI/moc_SensitivitiesWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_SensitivitiesWidget.cpp_parameters [ 49%] Generating UI/moc_SliderDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_SliderDialog.cpp_parameters [ 49%] Generating UI/moc_SliderSettingsDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_SliderSettingsDialog.cpp_parameters [ 49%] Generating UI/moc_StateSubwidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_StateSubwidget.cpp_parameters [ 49%] Generating UI/moc_SteadyStateWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_SteadyStateWidget.cpp_parameters [ 49%] Generating UI/moc_TaskWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_TaskWidget.cpp_parameters [ 49%] Generating UI/moc_copasiWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_copasiWidget.cpp_parameters [ 49%] Generating UI/moc_copasiui3window.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_copasiui3window.cpp_parameters ../swig/copasi.i:418: Warning 404: Duplicate template instantiation of 'vector< CUnit >' with name 'CUnitStdVector' ignored, ../swig/CModel.i:149: Warning 404: previous instantiation of 'vector< CUnit >' with name 'CUnitStdVector'. [ 49%] Generating UI/moc_listviews.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_listviews.cpp_parameters [ 49%] Generating UI/moc_objectdebug.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_objectdebug.cpp_parameters [ 49%] Generating UI/moc_parametertable.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_parametertable.cpp_parameters [ 50%] Generating UI/moc_qtUtilities.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_qtUtilities.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:0: Note: No relevant classes found. No output generated. [ 50%] Generating UI/ui_CEntityProvenanceDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CEntityProvenanceDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CEntityProvenanceDialog.ui [ 50%] Generating UI/ui_CLNAResultSubwidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CLNAResultSubwidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.ui [ 50%] Generating UI/ui_CMCAResultSubwidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CMCAResultSubwidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultSubwidget.ui [ 50%] Generating UI/ui_CProvenanceDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CProvenanceDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProvenanceDialog.ui [ 50%] Generating UI/ui_CQAnalyticsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQAnalyticsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQAnalyticsWidget.ui [ 50%] Generating UI/ui_CQArrayAnnotationsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQArrayAnnotationsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.ui [ 50%] Generating UI/ui_CQBrowserPane.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQBrowserPane.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPane.ui [ 50%] Generating UI/ui_CQCheckModelWindow.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQCheckModelWindow.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCheckModelWindow.ui [ 50%] Generating UI/ui_CQCompartment.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQCompartment.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartment.ui [ 50%] Generating UI/ui_CQCompartmentCopyOptions.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQCompartmentCopyOptions.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentCopyOptions.ui [ 51%] Generating UI/ui_CQCompartmentsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQCompartmentsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentsWidget.ui [ 51%] Generating UI/ui_CQCrossSectionTaskWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQCrossSectionTaskWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCrossSectionTaskWidget.ui [ 51%] Generating UI/ui_CQDependenciesWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQDependenciesWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDependenciesWidget.ui [ 51%] Generating UI/ui_CQDependencyDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQDependencyDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDependencyDialog.ui [ 51%] Generating UI/ui_CQDependencyWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQDependencyWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDependencyWidget.ui [ 51%] Generating UI/ui_CQDifferentialEquations.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQDifferentialEquations.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDifferentialEquations.ui [ 51%] Generating UI/ui_CQEFMListWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQEFMListWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMListWidget.ui [ 51%] Generating UI/ui_CQEFMResultWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQEFMResultWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMResultWidget.ui [ 51%] Generating UI/ui_CQEFMWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQEFMWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMWidget.ui [ 51%] Generating UI/ui_CQEventWidget1.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQEventWidget1.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventWidget1.ui [ 51%] Generating UI/ui_CQEventsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQEventsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventsWidget.ui [ 51%] Generating UI/ui_CQExpandModelData.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpandModelData.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpandModelData.ui [ 51%] Generating UI/ui_CQExperimentData.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExperimentData.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.ui [ 51%] Generating UI/ui_CQExperimentSelection.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExperimentSelection.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentSelection.ui [ 52%] Generating UI/ui_CQExpressionMmlStackedWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.ui [ 52%] Generating UI/ui_CQFittingItemWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQFittingItemWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.ui [ 52%] Generating UI/ui_CQFittingResult.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQFittingResult.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.ui [ 52%] Generating UI/ui_CQFittingResultTab1.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQFittingResultTab1.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResultTab1.ui [ 52%] Generating UI/ui_CQFittingWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQFittingWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingWidget.ui [ 52%] Generating UI/ui_CQFunctionsWidget.h [ 52%] Linking CXX executable CopasiSE cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQFunctionsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionsWidget.ui cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSE && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSE.dir/link.txt --verbose=1 [ 52%] Generating UI/ui_CQGlobalQuantitiesWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQGlobalQuantitiesWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantitiesWidget.ui [ 52%] Generating UI/ui_CQLNAWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQLNAWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLNAWidget.ui [ 52%] Generating UI/ui_CQLayoutsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQLayoutsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsWidget.ui [ 52%] Generating UI/ui_CQLyapResultWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQLyapResultWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapResultWidget.ui [ 52%] Generating UI/ui_CQLyapWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQLyapWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapWidget.ui [ 52%] Generating UI/ui_CQMCAWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMCAWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMCAWidget.ui [ 52%] Generating UI/ui_CQMathMatrixWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMathMatrixWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMathMatrixWidget.ui [ 53%] Generating UI/ui_CQMatrixDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMatrixDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMatrixDialog.ui [ 53%] Linking CXX executable CopasiSBW cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSBW.dir/link.txt --verbose=1 [ 53%] Generating UI/ui_CQMergingData.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMergingData.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMergingData.ui [ 53%] Generating UI/ui_CQMessageBox.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMessageBox.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMessageBox.ui [ 53%] Generating UI/ui_CQModelValue.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQModelValue.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.ui [ 53%] Generating UI/ui_CQModelWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQModelWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelWidget.ui [ 53%] Generating UI/ui_CQMoietiesTaskResult.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMoietiesTaskResult.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskResult.ui [ 53%] Generating UI/ui_CQMoietiesTaskWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMoietiesTaskWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskWidget.ui [ 53%] Generating UI/ui_CQMultipleSelectionDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMultipleSelectionDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMultipleSelectionDialog.ui [ 53%] Generating UI/ui_CQNameSelectionDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQNameSelectionDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNameSelectionDialog.ui [ 53%] Generating UI/ui_CQNotes.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQNotes.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.ui [ 53%] Generating UI/ui_CQOptimizationResult.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQOptimizationResult.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.ui [ 53%] Generating UI/ui_CQOptimizationWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQOptimizationWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationWidget.ui [ 53%] Generating UI/ui_CQOscillationTaskWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQOscillationTaskWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOscillationTaskWidget.ui [ 54%] Generating UI/ui_CQParameterEstimationResult.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQParameterEstimationResult.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterEstimationResult.ui [ 54%] Generating UI/ui_CQParameterOverviewWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQParameterOverviewWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewWidget.ui [ 54%] Generating UI/ui_CQParameterSetWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQParameterSetWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetWidget.ui [ 54%] Generating UI/ui_CQParameterSetsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQParameterSetsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsWidget.ui [ 54%] Generating UI/ui_CQParametersWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQParametersWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParametersWidget.ui [ 54%] Generating UI/ui_CQPlotsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQPlotsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPlotsWidget.ui [ 54%] Generating UI/ui_CQPreferenceDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQPreferenceDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPreferenceDialog.ui [ 54%] Generating UI/ui_CQProgressDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQProgressDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQProgressDialog.ui [ 54%] Generating UI/ui_CQProgressItem.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQProgressItem.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQProgressItem.ui [ 54%] Generating UI/ui_CQProgressItemBar.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQProgressItemBar.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQProgressItemBar.ui [ 54%] Generating UI/ui_CQProgressItemText.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQProgressItemText.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQProgressItemText.ui [ 54%] Generating UI/ui_CQReactionsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQReactionsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionsWidget.ui [ 54%] Generating UI/ui_CQReportDefinition.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQReportDefinition.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportDefinition.ui [ 54%] Generating UI/ui_CQReportDefinitionSelect.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQReportDefinitionSelect.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportDefinitionSelect.ui [ 55%] Generating UI/ui_CQReportsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQReportsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportsWidget.ui [ 55%] Generating UI/ui_CQSEDMLImportDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSEDMLImportDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSEDMLImportDialog.ui [ 55%] Generating UI/ui_CQScanWidgetParameterSet.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQScanWidgetParameterSet.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQScanWidgetParameterSet.ui [ 55%] Generating UI/ui_CQScrolledDependenciesWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQScrolledDependenciesWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQScrolledDependenciesWidget.ui [ 55%] Generating UI/ui_CQSensResultWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSensResultWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSensResultWidget.ui [ 55%] Generating UI/ui_CQSpeciesDetail.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSpeciesDetail.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesDetail.ui [ 55%] Generating UI/ui_CQSpeciesWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSpeciesWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesWidget.ui [ 55%] Generating UI/ui_CQSplashWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSplashWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSplashWidget.ui [ 55%] Generating UI/ui_CQStartValueReset.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQStartValueReset.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQStartValueReset.ui [ 55%] Generating UI/ui_CQSteadyStateResult.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSteadyStateResult.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSteadyStateResult.ui [ 55%] Generating UI/ui_CQTSSAResultSubWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTSSAResultSubWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.ui [ 55%] Generating UI/ui_CQTSSAWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTSSAWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAWidget.ui [ 55%] Generating UI/ui_CQTabWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTabWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTabWidget.ui [ 56%] Generating UI/ui_CQTaskBtnWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTaskBtnWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTaskBtnWidget.ui [ 56%] Generating UI/ui_CQTaskHeaderWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTaskHeaderWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTaskHeaderWidget.ui [ 56%] Generating UI/ui_CQTaskMethodWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTaskMethodWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTaskMethodWidget.ui [ 56%] Generating UI/ui_CQTextDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTextDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTextDialog.ui [ 56%] Generating UI/ui_CQTimeSensWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTimeSensWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSensWidget.ui [ 56%] Generating UI/ui_CQTimeSeriesWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTimeSeriesWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSeriesWidget.ui [ 56%] Generating UI/ui_CQTrajectoryWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTrajectoryWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTrajectoryWidget.ui [ 56%] Generating UI/ui_CQUndoHistoryDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQUndoHistoryDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUndoHistoryDialog.ui [ 56%] Generating UI/ui_CQUnitDetail.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQUnitDetail.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDetail.ui [ 56%] Generating UI/ui_CQUnitsWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQUnitsWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitsWidget.ui [ 56%] Generating UI/ui_CQUpdateAvogadro.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQUpdateAvogadro.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUpdateAvogadro.ui [ 56%] Generating UI/ui_CScanWidgetRandom.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CScanWidgetRandom.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanWidgetRandom.ui [ 56%] Generating UI/ui_CScanWidgetRepeat.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CScanWidgetRepeat.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanWidgetRepeat.ui [ 56%] Generating UI/ui_CScanWidgetScan.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CScanWidgetScan.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanWidgetScan.ui [ 57%] Generating UI/ui_CScanWidgetTask.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CScanWidgetTask.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanWidgetTask.ui [ 57%] Generating UI/ui_CUpDownSubwidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CUpDownSubwidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CUpDownSubwidget.ui [ 57%] Generating UI/ui_DefaultplotDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_DefaultplotDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DefaultplotDialog.ui [ 57%] Generating UI/ui_FunctionWidget1.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_FunctionWidget1.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.ui [ 57%] Generating UI/ui_ReactionsWidget1.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.ui [ 57%] Generating UI/ui_SensitivitiesWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_SensitivitiesWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SensitivitiesWidget.ui [ 57%] Generating UI/ui_SliderDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_SliderDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderDialog.ui [ 57%] Generating UI/ui_SliderSettingsDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_SliderSettingsDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderSettingsDialog.ui [ 57%] Generating UI/ui_StateSubwidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_StateSubwidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.ui [ 57%] Generating UI/ui_SteadyStateWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_SteadyStateWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SteadyStateWidget.ui [ 57%] Generating UI/ui_objectdebug.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_objectdebug.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/objectdebug.ui [ 57%] Generating barChart/moc_CQ3DBarsModifier.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart/moc_CQ3DBarsModifier.cpp_parameters [ 57%] Generating layoutUI/moc_BezierCurve.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_BezierCurve.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/BezierCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CArrow.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CArrow.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CArrow.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CCompartmentGraphNode.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CCompartmentGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CCompartmentGraphNode.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CDataEntity.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CDataEntity.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CDataEntity.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphCurve.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CGraphCurve.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CGraphCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphNode.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CGraphNode.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CLabel.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CLabel.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CLabel.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CQAutolayoutWizard.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CQAutolayoutWizard.cpp_parameters [ 58%] Generating layoutUI/moc_CQCurrentValueTable.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CQCurrentValueTable.cpp_parameters [ 58%] Generating layoutUI/moc_CQLayoutThread.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CQLayoutThread.cpp_parameters [ 58%] Generating layoutUI/moc_CQPlayerControlWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CQPlayerControlWidget.cpp_parameters [ 58%] Generating layoutUI/moc_CQSpringLayoutParameterWindow.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp_parameters [ 58%] Generating layoutUI/moc_CSimSummaryInfo.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CSimSummaryInfo.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CSimSummaryInfo.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CVisParameters.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CVisParameters.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CVisParameters.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_BandedGraphWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_BandedGraphWidget.cpp_parameters [ 58%] Generating plotUI/moc_C2DCurveData.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_C2DCurveData.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/C2DCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_C2DPlotCurve.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_C2DPlotCurve.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/C2DPlotCurve.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CBandedGraphData.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CBandedGraphData.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CBandedGraphData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CHistoCurveData.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CHistoCurveData.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CHistoCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CLinearColorMap.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CLinearColorMap.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CLinearColorMap.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_COutputHandlerPlot.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_COutputHandlerPlot.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/COutputHandlerPlot.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotInterface.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CPlotInterface.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CPlotInterface.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotSpectogram.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CPlotSpectogram.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CPlotSpectogram.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CQAdvancedPlotSettings.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp_parameters [ 58%] Generating plotUI/moc_CQCustomPlot.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQCustomPlot.cpp_parameters [ 58%] Generating plotUI/moc_CQDataVizPlot.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQDataVizPlot.cpp_parameters [ 59%] Generating plotUI/moc_CQExtender.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQExtender.cpp_parameters [ 59%] Generating plotUI/moc_CQMarchingSquares.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQMarchingSquares.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotColors.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQPlotColors.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotColors.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotEditWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQPlotEditWidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotEditWidget.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotSubwidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQPlotSubwidget.cpp_parameters [ 59%] Generating plotUI/moc_CQSpectogramWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQSpectogramWidget.cpp_parameters [ 59%] Generating plotUI/moc_CQtChartsPlot.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQtChartsPlot.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQtChartsPlot.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQwtPlot.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CQwtPlot.cpp_parameters [ 59%] Generating plotUI/moc_CSpectorgramData.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_CSpectorgramData.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CSpectorgramData.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_HistoWidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_HistoWidget.cpp_parameters [ 59%] Generating plotUI/moc_curve2dwidget.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_curve2dwidget.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject * >::operator ()(size_t const &). [ 59%] Generating plotUI/moc_plotwindow.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_plotwindow.cpp_parameters [ 59%] Generating plotUI/moc_scrollbar.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_scrollbar.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject const * >::operator ()(size_t const &). [ 59%] Generating plotUI/moc_scrollzoomer.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/moc_scrollzoomer.cpp_parameters [ 59%] Generating plotUI/ui_BandedGraphWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/ui_BandedGraphWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/BandedGraphWidget.ui /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CFunction const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CFunction const * >::operator ()(size_t const &). [ 59%] Generating plotUI/ui_CQAdvancedPlotSettings.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/ui_CQAdvancedPlotSettings.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQAdvancedPlotSettings.ui [ 59%] Generating plotUI/ui_CQPlotSubwidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/ui_CQPlotSubwidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotSubwidget.ui /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CObjectInterface const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CObjectInterface const * >::operator ()(size_t const &). [ 59%] Generating plotUI/ui_CQSpectogramWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/ui_CQSpectogramWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQSpectogramWidget.ui [ 60%] Generating plotUI/ui_HistoWidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/ui_HistoWidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/HistoWidget.ui [ 60%] Generating plotUI/ui_PlotSubwidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/ui_PlotSubwidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/PlotSubwidget.ui [ 60%] Generating plotUI/ui_curve2dwidget.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/ui_curve2dwidget.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/curve2dwidget.ui [ 60%] Generating qlayout/moc_CQAnimationControls.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQAnimationControls.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationSettingsEditor.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationWindow.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQAnimationWindow.cpp_parameters [ 60%] Generating qlayout/moc_CQConnectionGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiAnimation.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQCopasiAnimation.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQCopasiAnimation.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQCopasiEffect.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQCopasiEffect.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQCopasiGraphicsItem.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescription.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQEffectDescription.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQEffectDescription.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescriptionEdit.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp_parameters [ 60%] Generating qlayout/moc_CQElementProperties.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQElementProperties.cpp_parameters [ 61%] Generating qlayout/moc_CQLabelGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQLabelGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutScene.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQLayoutScene.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutView.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQLayoutView.cpp_parameters [ 61%] Generating qlayout/moc_CQRenderConverter.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQRenderConverter.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQRenderConverter.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQRoundedRect.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQRoundedRect.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQRoundedRect.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQStyledGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQStyledGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQZoomableView.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/moc_CQZoomableView.cpp_parameters [ 61%] Generating qlayout/ui_CQAnimationControls.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/ui_CQAnimationControls.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationControls.ui [ 62%] Generating qlayout/ui_CQAnimationSettingsEditor.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/ui_CQAnimationSettingsEditor.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationSettingsEditor.ui [ 62%] Generating qlayout/ui_CQAnimationWindow.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/ui_CQAnimationWindow.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.ui [ 62%] Generating qlayout/ui_CQEffectDescriptionEdit.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/ui_CQEffectDescriptionEdit.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQEffectDescriptionEdit.ui [ 62%] Generating qlayout/ui_CQElementProperties.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/ui_CQElementProperties.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQElementProperties.ui [ 62%] Generating qrc_copasi.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/rcc --name copasi --output /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qrc_copasi.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/resourcesUI/copasi.qrc [ 62%] Generating resourcesUI/moc_CQIconResource.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/resourcesUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/resourcesUI/moc_CQIconResource.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/resourcesUI/CQIconResource.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CMathMLToTeX.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/moc_CMathMLToTeX.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CStructureParser.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/moc_CStructureParser.cpp_parameters /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating undoUI/moc_CQUndoDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/moc_CQUndoDM.cpp_parameters [ 63%] Generating undoUI/moc_CQUndoDialog.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/moc_CQUndoDialog.cpp_parameters [ 63%] Generating undoUI/ui_CQUndoDialog.h cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/ui_CQUndoDialog.h /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDialog.ui [ 63%] Generating wizard/moc_wizard.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard/moc_wizard.cpp_parameters cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CMakeFiles/libCOPASIUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASIUI.dir/build.make copasi/CMakeFiles/libCOPASIUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQCreatorDM.cpp [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQMiriamWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSlider.h:49: Warning 462: Unable to set dimensionless array variable /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CSlider.h:54: Warning 462: Unable to set dimensionless array variable In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQMiriamWidget.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQMiriamWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQMiriamWidget.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python" -P /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/../common/patch-wrapper.cmake -- Patching C++ wrapper cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python" -DVERSION=4.44.295 -P /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/patch-python.cmake -- Patching Python wrapper cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [ 63%] Building CXX object copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -Dbinding_python_lib_EXPORTS -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python -I/usr/include/python3.13 -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -MF CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o.d -o CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQModifiedDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/local.cpp:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:4678: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/local_common.cpp:70: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTaskTypes.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/downcast_common.cpp:48, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/local.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/downcast_common.cpp:246:54: required from here 246 | else if (dynamic_cast(container)) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CDataModel]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CDataModel; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CDataModel; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CDataModel; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/downcast_common.cpp:250:48: required from here 250 | else if (dynamic_cast(container)) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/downcast_common.cpp:270:59: required from here 270 | else if (dynamic_cast(container)) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvaluationTree]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvaluationTree; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvaluationTree; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvaluationTree; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/common/downcast_common.cpp:363:59: required from here 363 | else if (dynamic_cast(container)) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘CDataObject* CVector_Sl_CDataObject_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:7017:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 7017 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CDataObject* CVector_Sl_CDataObject_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:7031:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 7031 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CFunction* CVector_Sl_CFunction_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:7045:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 7045 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CObjectInterface* CVector_Sl_CObjectInterface_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:7059:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 7059 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:10803:42: required from here 10803 | return (CDataObject*)&((*self)[name]); | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:10880:42: required from here 10880 | return (CDataObject*)&((*self)[name]); | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotItem]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotItem; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotItem; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotItem; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘std::vector CDataHandler_getNthRow(CDataHandler*, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:14354:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14354 | if (index >= data.size()) | ~~~~~~^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:15556: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:15609:42: required from here 15609 | return (CDataObject*)&((*self)[name]); | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:15659: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:16365: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQRDFTreeView.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQRDFTreeView.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQRDFTreeView.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQRDFTreeView.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SBMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:205040:3: warning: deleting object of polymorphic class type ‘SBMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 205040 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_CSBMLExporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:205919:3: warning: deleting object of polymorphic class type ‘CSBMLExporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 205919 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SEDMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:206805:3: warning: deleting object of polymorphic class type ‘SEDMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 206805 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQRDFTreeViewItem.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5425:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5428:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5431:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/CQReferenceDM.cpp In member function ‘getSpeciesChanges’: lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart/CQ3DBarsModifier.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/BezierCurve.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CArrow.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp: In member function ‘void CQSelectionWizardPage::fillTree(const CModel&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp:417:46: warning: enum constant in boolean context [-Wint-in-bool-context] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp:417:66: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp:434:54: warning: enum constant in boolean context [-Wint-in-bool-context] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQAutolayoutWizard.cpp:434:74: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5425:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5428:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5431:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem 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-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CGraphNode.cpp In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:4504:77: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CLabel.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQLayoutThread.cpp In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:4504:77: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQLayoutThread.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQPlayerControlWidget.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/CQSpringLayoutParameterWindow.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationSettingsEditor.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQCopasiAnimation.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.cpp:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.cpp:128:88: required from here 128 | const CEFMTask *task = dynamic_cast< const CEFMTask * >(&mpDataModel->getTaskList()->operator[]("Elementary Flux Modes")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.cpp: In member function ‘virtual void QCustomTimeCourseAnimation::getScales(std::vector&, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQAnimationWindow.cpp:348:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 348 | if (index == C_INVALID_INDEX) [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQConnectionGraphicsItem.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new: In member function ‘intialize’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQConnectionGraphicsItem.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQCopasiAnimation.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQCopasiEffect.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQCopasiGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQCopasiGraphicsItem.cpp:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQEffectDescription.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQEffectDescriptionEdit.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQElementProperties.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQElementProperties.cpp:12: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLabelGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLabelGraphicsItem.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLayoutScene.cpp In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:190980:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:5131:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 5131 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:14072:14: note: ‘success’ was declared here 14072 | bool success; | ^~~~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRaw’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:190933:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:5131:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 5131 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRaw’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:14052:14: note: ‘success’ was declared here 14052 | bool success; | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLayoutScene.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLCurve.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQConnectionGraphicsItem.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLayoutScene.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLayoutScene.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLayoutScene.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLayoutView.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLayoutView.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQLayoutView.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQRenderConverter.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQRenderConverter.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQRoundedRect.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQStyledGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQStyledGraphicsItem.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout/CQZoomableView.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/BandedGraphWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/BandedGraphWidget.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/BandedGraphWidget.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/C2DCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/C2DPlotCurve.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CBandedGraphData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CHistoCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CLinearColorMap.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/COutputHandlerPlot.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/plotwindow.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/COutputHandlerPlot.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CPlotInterface.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CPlotSpectogram.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQAdvancedPlotSettings.cpp In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_processRaw’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:191050:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:5131:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 5131 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_processRaw’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python/copasi_wrapper.cpp:14116:14: note: ‘success’ was declared here 14116 | bool success; | ^~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual bool CQCustomPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:558:8: warning: variable ‘needLeft’ set but not used [-Wunused-but-set-variable] 558 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual void CQCustomPlot::wheelEvent(QWheelEvent*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1584:50: warning: ‘QPoint QWheelEvent::pos() const’ is deprecated: Use position() [-Wdeprecated-declarations] 1584 | QCPLayerable * element = layerableAt(event->pos(), true); | ~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/QPaintEvent:1, from /usr/include/qcustomplot.h:56, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.h:24: /usr/include/qt5/QtGui/qevent.h:225:19: note: declared here 225 | inline QPoint pos() const { return p.toPoint(); } | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1681:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 1681 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1804:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1804 | if (current_count != data_size && pY2) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1808:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1808 | for (int i = current_count; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1833:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1833 | if (current_count != data_size && helper) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1851:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 1851 | if (data_size != current_count) | ~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1864:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1864 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1902:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1902 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1943:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1943 | for (int l = 0; l < contours.size(); l++) | ~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:1946:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1946 | for (int j = 0; j < contours[l].size(); j++) | ~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::resizeCurveData(const size_t&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:2027:48: warning: unused variable ‘data’ [-Wunused-variable] 2027 | std::vector< CVector< double > * > & data = mData[activity]; | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::initializeIndependentData(const CDataModel&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:2228:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2228 | for (int c = 0; c < numCols; ++c) | ~~^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:2219:14: warning: unused variable ‘independentObjects’ [-Wunused-variable] 2219 | auto & independentObjects = pExperiment->getIndependentObjects(); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateSteadyStateInfo(int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQCustomPlot.cpp:2252:9: warning: unused variable ‘model’ [-Wunused-variable] 2252 | auto& model = *CRootContainer::getDatamodelList()->begin(); | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(QWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:43:1: warning: when initialized here [-Wreorder] 43 | CQDataVizPlot::CQDataVizPlot(QWidget * parent) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(const CPlotSpecification*, QWidget*, PlotMode)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:68:1: warning: when initialized here [-Wreorder] 68 | CQDataVizPlot::CQDataVizPlot(const CPlotSpecification * plotspec, QWidget * parent, PlotMode mode) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:259:8: warning: unused variable ‘needLeft’ [-Wunused-variable] 259 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:260:8: warning: unused variable ‘needRight’ [-Wunused-variable] 260 | bool needRight = false; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:362:12: warning: unused variable ‘isSpectogram’ [-Wunused-variable] 362 | bool isSpectogram = pItem->getType() == CPlotItem::spectogram; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp: In function ‘std::set resizeRange(std::set&, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:571:20: warning: comparison of integer expressions of different signedness: ‘std::set::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 571 | if (range.size() < maxRange) | ~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘void CQDataVizPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:623:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 623 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:645:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 645 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:692:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 692 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:698:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 698 | for (auto i = 0; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:630:12: warning: unused variable ‘curve_type’ [-Wunused-variable] 630 | auto curve_type = (*itCurves)->property("curve_type").toInt(); | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:617:8: warning: unused variable ‘data_changed’ [-Wunused-variable] 617 | bool data_changed = false; | ^~~~~~~~~~~~ In file included from /usr/include/c++/15/utility:71, from /usr/include/qt5/QtCore/qglobal.h:47, from /usr/include/qt5/QtCore/qnamespace.h:43, from /usr/include/qt5/QtCore/qobjectdefs.h:48, from /usr/include/qt5/QtCore/qobject.h:46, from /usr/include/qt5/QtCore/QObject:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.h:20: /usr/include/c++/15/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:727:41: required from here 727 | dataMap[std::make_pair(cur_x, cur_z)] = QVector3D(cur_x, cur_y, cur_z); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1146:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 1146 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::saveData(const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:1005:26: warning: unused variable ‘scatter’ [-Wunused-variable] 1005 | QScatter3DSeries * scatter = qobject_cast< QScatter3DSeries * >(curve.second); | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQDataVizPlot.cpp:1000:8: warning: unused variable ‘FirstHistogram’ [-Wunused-variable] 1000 | bool FirstHistogram = true; | ^~~~~~~~~~~~~~ In member function ‘getSpeciesChanges’: lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQExtender.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.cpp:76:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 76 | switch (cellSide) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘void CQMarchingSquares::isoSubpath(IsoCell*, int, int, levelPaths&, int&, int&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.cpp:547:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 547 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.cpp:584:14: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 584 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQMarchingSquares.cpp:90:1: warning: control reaches end of non-void function [-Wreturn-type] 90 | } | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotColors.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotEditWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotEditWidget.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotSubwidget.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotSubwidget.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotSubwidget.cpp: In member function ‘void CQPlotSubwidget::addSpectrum()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotSubwidget.cpp:590:14: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 590 | size_t imax; | ^~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQSpectogramWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQSpectogramWidget.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQSpectogramWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQtChartsPlot.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQwtPlot.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQwtPlot.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQwtPlot.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQwtPlot.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQwtPlot.h:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQwtPlot.h:49: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CSpectorgramData.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CSpectorgramData.cpp: In member function ‘virtual double CSpectorgramData::value(double, double) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CSpectorgramData.cpp:342:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 342 | if (xpos == mSizeX) --xpos; | ~~~~~^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CSpectorgramData.cpp:344:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 344 | if (ypos == mSizeY) --ypos; | ~~~~~^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/HistoWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/HistoWidget.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/HistoWidget.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/HistoWidget.cpp: In member function ‘HistoWidget::buttonPressedX()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/HistoWidget.cpp:90:66: warning: ‘nonnull’ argument ‘this’ compared to NULL [-Wnonnull-compare] 90 | while (!(pParent = dynamic_cast< CQPlotSubwidget * >(tmp)) && this) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/curve2dwidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/curve2dwidget.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/curve2dwidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new: In member function ‘start’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/plotwindow.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/scrollbar.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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/usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI/scrollzoomer.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.h:62:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mNode(QString&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.cpp:183:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 183 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.cpp:187:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 187 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mtableNode(QString&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.cpp:210:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 210 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CMathMLToTeX.cpp:214:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 214 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.h:62:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.cpp:69:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 69 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex/CStructureParser.cpp:337:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 337 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard/wizard.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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/usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/AboutDialog.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CColorScale.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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/usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiPlot2YSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiPlotSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiPlotSelectionDialog.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiPlotSelectionDialog.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiSelectionDialog.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiSelectionDialog.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiSelectionDialog.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CCopasiSelectionWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.cpp:227:58: required from here 227 | dynamic_cast(& mpDataModel->getTaskList()->operator[]("Linear Noise Approximation")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultWidget.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultWidget.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultWidget.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CLNAResultWidget.cpp:57:57: required from here 57 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Linear Noise Approximation")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultSubwidget.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultSubwidget.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultSubwidget.cpp:298:57: required from here 298 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultWidget.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultWidget.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCATask.h:43, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CMCAResultWidget.cpp:69:57: required from here 69 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProgressBar.cpp /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -Wl,--dependency-file=CMakeFiles/CopasiSE.dir/link.d CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -o CopasiSE ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so //usr/lib64/libuuid.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [ 69%] Built target CopasiSE [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQAnalyticsWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQAnalyticsWidget.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQAnalyticsWidget.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/analytics/CAnalyticsTask.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQAnalyticsWidget.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidgetDM.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBaseDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI 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/usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBaseTreeDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPane.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCheckModelWindow.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_iterator_base_funcs.h:68, from /usr/include/c++/15/string:49, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:16: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:457:91: required from here 457 | updateNode(findNodeFromId(ListViews::WidgetType::SteadyState), mpCopasiDM->getTaskList()->operator[]("Steady-State").getCN()); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp: In member function ‘void CQBrowserPaneDM::createStaticDM()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 993 | switch (pNodeInfo->node) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Compartments’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Species’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Reactions’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Events’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSets’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Plots’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplates’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCheckModelWindow.cpp: In constructor ‘CQCheckModelWindow::CQCheckModelWindow(CopasiUI3Window*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCheckModelWindow.cpp:21: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQComboDelegate.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartment.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentCopyOptions.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartment.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartment.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartment.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentDM.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentDM.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentsWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentDM.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCopasiApplication.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentsWidget.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentsWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentsWidget.cpp: In member function ‘virtual void CQCompartmentsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartmentsWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCrossSectionTaskWidget.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDateTimeEditDelegate.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCrossSectionTaskWidget.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCrossSectionTaskWidget.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCrossSectionTaskWidget.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDependenciesWidget.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDependencyDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDependenciesWidget.cpp:11: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDependencyWidget.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDifferentialEquations.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQDependencyWidget.cpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMListWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMNetReactionDM.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMReactionDM.cpp /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -rdynamic -Wl,--dependency-file=CMakeFiles/CopasiSBW.dir/link.d CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -o CopasiSBW ../libCOPASISE.a //usr/lib64/libSBW.so -lpthread -lz /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 //usr/lib64/libuuid.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so -lflexiblas -lz gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [ 71%] Built target CopasiSBW [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMNetReactionDM.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMNetReactionDM.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMReactionDM.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMReactionDM.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMSpeciesDM.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMSpeciesDM.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMSpeciesDM.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMSpeciesDM.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMSpeciesDM.cpp: In member function ‘virtual QVariant CQEFMSpeciesDM::data(const QModelIndex&, int) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMSpeciesDM.cpp:91:109: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 91 | mpTask->getSpeciesChanges(*(mBeginModes + index.row()), **(mBeginSpecies + index.column() - 1)); | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventDM.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventDM.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventDM.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventWidget1.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventsWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventWidget1.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventsWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventsWidget.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpandModelData.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventWidget1.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventsWidget.cpp: In member function ‘virtual void CQEventsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventsWidget.cpp:250:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 250 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpandModelData.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpandModelData.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentSelection.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp:57: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CExperimentSet.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp: In member function ‘void CQExperimentData::slotFileEdit()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp:628:10: warning: unused variable ‘i’ [-Wunused-variable] 628 | size_t i = mpExperimentSetCopy->getExperimentCount() - 1; | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp: In member function ‘bool CQExperimentData::saveTable(CExperiment*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExperimentData.cpp:1536:8: warning: variable ‘FoundTime’ set but not used [-Wunused-but-set-variable] 1536 | bool FoundTime = false; | ^~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem 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-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem 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-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.cpp:51: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.cpp:50: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h: In constructor ‘CQExpressionWidget::CQExpressionWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:273:15: warning: ‘CQExpressionWidget::mCursor’ will be initialized after [-Wreorder] 273 | QTextCursor mCursor; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:272:28: warning: ‘CQExpressionHighlighter* CQExpressionWidget::mpExpressionHighlighter’ [-Wreorder] 272 | CQExpressionHighlighter *mpExpressionHighlighter; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.cpp:218:1: warning: when initialized here [-Wreorder] 218 | CQExpressionWidget::CQExpressionWidget(QWidget * parent, const char * name) | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:51: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadExperimentSetIntoTree(const CExperimentSet&, QTreeWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:144:20: warning: variable ‘pItem’ set but not used [-Wunused-but-set-variable] 144 | QTreeWidgetItem* pItem = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:208:57: required from here 208 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Parameter Estimation")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp: In member function ‘virtual bool CQFittingResult::enterProtected()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:275:32: warning: unused variable ‘Solutions’ [-Wunused-variable] 275 | const CVector< C_FLOAT64 > & Solutions = mpProblem->getSolutionVariables(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:276:32: warning: unused variable ‘StdDeviations’ [-Wunused-variable] 276 | const CVector< C_FLOAT64 > & StdDeviations = mpProblem->getVariableStdDeviations(); | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:277:32: warning: unused variable ‘Gradients’ [-Wunused-variable] 277 | const CVector< C_FLOAT64 > & Gradients = mpProblem->getVariableGradients(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:525:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 525 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResult.cpp:530:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 530 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResultTab1.cpp In file included from /usr/include/c++/15/aarch64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/15/bits/allocator.h:46, from /usr/include/c++/15/string:45, from /usr/include/qt5/QtCore/qbytearray.h:52, from /usr/include/qt5/QtCore/qvariant.h:44, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:25: In member function ‘std::__new_allocator::construct(COptItem**, COptItem* const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, COptItem**, COptItem* const&)void’ at /usr/include/c++/15/bits/alloc_traits.h:674:17, inlined from ‘std::vector >::push_back(COptItem* const&)’ at /usr/include/c++/15/bits/stl_vector.h:1420:30, inlined from ‘CQFittingItemWidget::slotNew()’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:1137:25: /usr/include/c++/15/bits/new_allocator.h:191:11: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotNew()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:1119:13: note: ‘pItem’ declared here 1119 | COptItem *pItem; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingResultTab1.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotCopy()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:952:15: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 952 | setTableText((int) row, pItem); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:925:13: note: ‘pItem’ declared here 925 | COptItem *pItem; | ^~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotParamEdit()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:452:29: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 452 | pItem->setObjectCN(Selection[i]->getCN()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingItemWidget.cpp:434:21: note: ‘pItem’ declared here 434 | COptItem *pItem; | ^~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFluxModeDM.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingWidget.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingWidget.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingWidget.cpp:52: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingWidget.cpp: In member function ‘virtual bool CQFittingWidget::taskFinishedEvent()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFittingWidget.cpp:309:8: warning: unused variable ‘result’ [-Wunused-variable] 309 | bool result = TaskWidget::taskFinishedEvent(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionDM.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionDM.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionDM.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionsWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantitiesWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantityDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionsWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionsWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionsWidget.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionsWidget.cpp: In member function ‘virtual void CQFunctionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQFunctionsWidget.cpp:243:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 243 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantityDM.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantityDM.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantityDM.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantitiesWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantitiesWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantityDM.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantitiesWidget.cpp: In member function ‘virtual void CQGlobalQuantitiesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQGlobalQuantitiesWidget.cpp:251:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 251 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLNAWidget.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsDM.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLNAWidget.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLNAWidget.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLNAWidget.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLNAWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLNAWidget.cpp:60:69: required from here 60 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsDM.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsDM.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapResultWidget.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsWidget.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:36:31: required from here 36 | class CListOfLayouts : public CDataVectorN< CLayout > | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsWidget.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLayoutsWidget.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapResultWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapResultWidget.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapResultWidget.cpp:77:64: required from here 77 | mpTask = dynamic_cast(&mpDataModel->getTaskList()->operator[]("Lyapunov Exponents")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapWidget.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapWolfMethod.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQLyapWidget.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMCAWidget.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMathMatrixWidget.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMatrixDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMCAWidget.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMCAWidget.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMCAWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMCAWidget.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMCAWidget.cpp:69:69: required from here 69 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMergingData.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMessageBox.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMathMatrixWidget.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMathMatrixWidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMathMatrixWidget.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMathMatrixWidget.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMathMatrixWidget.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMergingData.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMergingData.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMessageBox.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMessageBox.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMessageBox.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMessageBox.cpp: In member function ‘virtual int CQMessageBox::exec()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMessageBox.cpp:454:7: warning: unused variable ‘result’ [-Wunused-variable] 454 | int result = QDialog::exec(); | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskResult.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.h: In constructor ‘CQModelValue::CQModelValue(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.h:70:15: warning: ‘CQModelValue::mObjectCNToCopy’ will be initialized after [-Wreorder] 70 | CCommonName mObjectCNToCopy; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.h:62:17: warning: ‘CModelValue* CQModelValue::mpModelValue’ [-Wreorder] 62 | CModelValue * mpModelValue; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.cpp:50:1: warning: when initialized here [-Wreorder] 50 | CQModelValue::CQModelValue(QWidget* parent, const char* name) | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelWidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelWidget.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelWidget.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidatorUnit.h:17, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelWidget.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelWidget.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskResult.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskResult.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskResult.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskResult.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNameSelectionDialog.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp:64: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp:63: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp: In member function ‘virtual QValidator::State CQValidatorXML::validate(QString&, int&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp:84:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 84 | QXmlSimpleReader Validator; | ^~~~~~~~~ In file included from /usr/include/qt5/QtXml/QXmlInputSource:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp:24: /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp:85:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 85 | QXmlInputSource Input; | ^~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp:152:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 152 | return QXmlDefaultHandler::startElement(namespaceURI, localName, qName, atts); | ^~~~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.cpp:162:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 162 | return QXmlDefaultHandler::endElement(namespaceURI, localName, qName); | ^~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp:98:57: required from here 98 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Optimization")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp: In member function ‘void CQOptimizationResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp:191:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 191 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationResult.cpp:196:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 196 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQEllipseItem::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp:90:12: warning: unused variable ‘m11’ [-Wunused-variable] 90 | double m11 = painter->transform().m11(); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp:472:34: warning: comparison of integer expressions of different signedness: ‘std::vector*>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 472 | if (mPopulation.size() > mMaxIterations) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp: In function ‘QString vec_to_string(CVector*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp:541:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 541 | for (int i = 1; i < pVec->size(); ++i) | ~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::update()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp:720:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 720 | i == mMinIndex, | ~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptPopulation.cpp:743:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 743 | i == mMinIndex, | ~~^~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOscillationTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationWidget.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationWidget.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs 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-specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterEstimationResult.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterGroupDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterGroupView.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterEstimationResult.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterEstimationResult.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterEstimationResult.cpp: In member function ‘void CQParameterEstimationResult::applyToModelState()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterEstimationResult.cpp:309:15: warning: unused variable ‘current’ [-Wunused-variable] 309 | int current = model->rowCount(); | ^~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewWidget.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterResultItemModel.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewDM.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewDM.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewDM.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewDM.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewDM.cpp: In static member function ‘static QVariant CQParameterOverviewDM::diffData(const CModelParameter*, int)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewDM.cpp:373:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 373 | switch (pNode->getCompareResult()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewDM.cpp:400:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 400 | switch (pNode->getCompareResult()) | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterResultItemModel.cpp:14: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterResultItemModel.cpp:13: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewWidget.cpp:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewWidget.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterOverviewWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsWidget.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPlotDM.cpp [ 74%] Linking CXX shared library _COPASI.so cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsDM.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsDM.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsDM.cpp: In member function ‘virtual QVariant CQParameterSetsDM::data(const QModelIndex&, int) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsDM.cpp:91:37: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 91 | if (mpListOfParameterSets->size() <= index.row()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsWidget.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsWidget.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsWidget.cpp: In member function ‘virtual void CQParameterSetsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQParameterSetsWidget.cpp:267:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 267 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPlotDM.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPlotsWidget.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPreferenceDialog.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQProgressDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPlotsWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPlotsWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPlotsWidget.cpp: In member function ‘virtual void CQPlotsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPlotsWidget.cpp:275:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 275 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 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/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQProgressItem.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem 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CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPushButtonDelegate.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionDM.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionDM.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionDM.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/qabstractitemmodel.h:43, from /usr/include/qt5/QtCore/qabstractproxymodel.h:43, from /usr/include/qt5/QtCore/qsortfilterproxymodel.h:43, from /usr/include/qt5/QtCore/QSortFilterProxyModel:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPushButtonDelegate.cpp:13: In member function ‘QMapNode::lowerBound(QAbstractButton* const&)’, inlined from ‘QMapData::findNode(QAbstractButton* const&) const’ at /usr/include/qt5/QtCore/qmap.h:288:33, inlined from ‘QMap::operator[](QAbstractButton* const&)’ at /usr/include/qt5/QtCore/qmap.h:681:26, inlined from ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPushButtonDelegate.cpp:98:25: /usr/include/qt5/QtCore/qmap.h:153:9: warning: ‘pEditor’ may be used uninitialized [-Wmaybe-uninitialized] 153 | if (!qMapLessThanKey(n->key, akey)) { | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPushButtonDelegate.cpp: In member function ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQPushButtonDelegate.cpp:58:21: note: ‘pEditor’ was declared here 58 | QAbstractButton * pEditor; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionDM.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionsWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionsWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionsWidget.cpp: In constructor ‘CQReactionsWidget::CQReactionsWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionsWidget.cpp:81:22: warning: unused variable ‘pWindow’ [-Wunused-variable] 81 | CopasiUI3Window *pWindow = dynamic_cast(parent->parent()); | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionsWidget.cpp: In member function ‘virtual void CQReactionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReactionsWidget.cpp:230:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportDM.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportDefinition.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportDefinitionSelect.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportListItem.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportDefinitionSelect.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportsWidget.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSBMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSEDMLFileDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportsWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportsWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSEDMLImportDialog.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportsWidget.cpp: In member function ‘virtual void CQReportsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQReportsWidget.cpp:229:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 229 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQScanWidgetParameterSet.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQScrolledDependenciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSEDMLImportDialog.cpp:6: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQScrolledDependenciesWidget.cpp:6: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQScanWidgetParameterSet.h:11, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQScanWidgetParameterSet.cpp:6: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQScanWidgetParameterSet.cpp:14: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSensResultWidget.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSortFilterProxyModel.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSensResultWidget.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSensResultWidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSensResultWidget.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSensResultWidget.cpp:85:57: required from here 85 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Sensitivities")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.cpp:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.h: In constructor ‘CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.h:116:40: warning: ‘CQSimpleSelectionTree::mpOutputVector’ will be initialized after [-Wreorder] 116 | std::vector< const CDataObject * > * mpOutputVector; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.h:112:26: warning: ‘CExpressionGenerator* CQSimpleSelectionTree::mpExpressionGenerator’ [-Wreorder] 112 | CExpressionGenerator * mpExpressionGenerator; | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.cpp:43:1: warning: when initialized here [-Wreorder] 43 | CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget *parent) | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSimpleSelectionTree.cpp:426:64: required from here 426 | task = dynamic_cast(&pDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpecieDM.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesDetail.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpecieDM.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpecieDM.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesDetail.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesDetail.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesDetail.cpp:28: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesWidget.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpinBoxDelegate.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSplashWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQStartValueReset.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesWidget.cpp: In member function ‘virtual void CQSpeciesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSteadyStateResult.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSteadyStateResult.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSteadyStateResult.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSteadyStateResult.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSteadyStateResult.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSteadyStateResult.cpp:80:65: required from here 80 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.cpp:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.cpp:87:58: required from here 87 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultWidget.cpp:82:57: required from here 82 | dynamic_cast(&pDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSATimeScaleWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTabWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAWidget.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTableView.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAWidget.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAWidget.cpp:224:58: required from here 224 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAWidget.cpp: In member function ‘CQTSSAWidget::runTask()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTSSAWidget.cpp:231:30: warning: ‘this’ pointer is null [-Wnonnull] 231 | mpTSSMethod->emptyVectors(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSATask.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tssanalysis/CTSSAMethod.h:157:8: note: in a call to non-static member function ‘CTSSAMethod::emptyVectors()’ 157 | void emptyVectors(); | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTabWidget.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTabWidget.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTableWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTabWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTabWidget.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTaskBtnWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSensWidget.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSeriesDM.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSeriesWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSeriesDM.cpp:19: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSensWidget.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSeriesWidget.cpp:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSensWidget.cpp:18: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSensWidget.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSensWidget.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/crosssection/CCrossSectionTask.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTimeSeriesWidget.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI 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CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTrajectoryWidget.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUndoTester.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTrajectoryWidget.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTrajectoryWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQTrajectoryWidget.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUndoTester.cpp:15: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:195:18: warning: ‘virtual CIssue CEvaluationTree::compile()’ was hidden [-Woverloaded-virtual=] 195 | virtual CIssue compile(); | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:96:18: note: by ‘virtual CIssue CExpression::compile(CObjectInterface::ContainerList)’ 96 | virtual CIssue compile(CObjectInterface::ContainerList listOfContainer = | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiModelTypes.h:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTaskTypes.h:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTaskTypes.h:88: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDM.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDM.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDM.cpp:30: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CopasiGuiTypes.h:169, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUndoTester.cpp:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ChemEqValidator.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CopasiGuiTypes.h:20: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUndoTester.cpp: In member function ‘void CQUndoTester::testModelDetail()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUndoTester.cpp:163:11: warning: unused variable ‘pModel’ [-Wunused-variable] 163 | CModel* pModel = (*CRootContainer::getDatamodelList())[0].getModel(); | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDetail.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitsWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDetail.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDetail.cpp:16: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDetail.cpp:21: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitDetail.cpp:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUpdateAvogadro.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitsWidget.cpp:24: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitsWidget.cpp:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitsWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitsWidget.cpp: In member function ‘virtual void CQUnitsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUnitsWidget.cpp:245:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUpdatesWidget.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new: In member function ‘intialize’: /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUpdatesWidget.cpp:34: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQUpdatesWidget.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidatorUnit.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanContainerWidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanItemData.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanWidgetRandom.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanWidgetRepeat.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanWidgetScan.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CScanWidgetTask.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CUpDownSubwidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CWindowInterface.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CopasiFileDialog.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CopasiSlider.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DefaultplotDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:46: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:58: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:65, from /usr/include/c++/15/bits/specfun.h:43, from /usr/include/c++/15/cmath:3913, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:25: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:70: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataObject.h:256:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 256 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:71: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:29: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.h: In constructor ‘DataModelGUI::DataModelGUI(QObject*, CDataModel*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.h:183:24: warning: ‘DataModelGUI::mpOutputHandlerPlot’ will be initialized after [-Wreorder] 183 | COutputHandlerPlot * mpOutputHandlerPlot; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.h:182:16: warning: ‘CDataModel* DataModelGUI::mpDataModel’ [-Wreorder] 182 | CDataModel * mpDataModel; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:96:1: warning: when initialized here [-Wreorder] 96 | DataModelGUI::DataModelGUI(QObject * parent, CDataModel * pDataModel): | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::notifyChanges(const CUndoData::CChangeSet&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:819:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 819 | switch (it->type) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::addRecentFile(const std::string&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:956:10: warning: enumeration value ‘OMEX’ not handled in switch [-Wswitch] 956 | switch (mpDataModel->getContentType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/DataModelGUI.cpp:956:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.cpp: In member function ‘bool FunctionWidget1::loadParameterTable()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.cpp:152:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 152 | switch (params[i]->getUsage()) | ^ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt 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-specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/MyLineEdit.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem 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/usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SensWidgetComboBox.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.cpp:48: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.cpp:53: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.cpp:54: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.cpp: In member function ‘void ReactionsWidget1::FillWidgetFromRI()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.cpp:406:35: warning: ‘QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 406 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:16: /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.cpp:421:35: warning: ‘QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 421 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ScanWidget.cpp:41: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ScanWidget.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ScanWidget.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SensitivitiesWidget.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderDialog.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderSettingsDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SensitivitiesWidget.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SensitivitiesWidget.cpp:31: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SensitivitiesWidget.cpp:45: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/sensitivities/CSensProblem.h:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SensitivitiesWidget.cpp: In member function ‘void SensitivitiesWidget::initCombos()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SensitivitiesWidget.cpp:324:7: warning: unused variable ‘i’ [-Wunused-variable] 324 | int i = 0; | ^ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderDialog.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderDialog.cpp:55: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderDialog.cpp:66: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderDialog.cpp:861:94: required from here 861 | mpParentWindow->getMainWidget()->getTrajectoryWidget()->enter(pDataModel->getTaskList()->operator[]("Time-Course").getCN()); | ^~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderDialog.cpp: In member function ‘std::vector* SliderDialog::getCSlidersForObject(CDataObject*, std::vector*) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SliderDialog.cpp:1087:8: warning: variable ‘issueWarning’ set but not used [-Wunused-but-set-variable] 1087 | bool issueWarning = false; | ^~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SteadyStateWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.cpp:25: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.cpp:38: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/TaskWidget.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.h: In constructor ‘StateSubwidget::StateSubwidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.h:51:12: warning: ‘StateSubwidget::mpModel’ will be initialized after [-Wreorder] 51 | CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.h:50:28: warning: ‘const CSteadyStateTask* StateSubwidget::mpTask’ [-Wreorder] 50 | const CSteadyStateTask * mpTask; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.cpp:53:1: warning: when initialized here [-Wreorder] 53 | StateSubwidget::StateSubwidget(QWidget* parent, const char* name) | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SteadyStateWidget.cpp:32: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SteadyStateWidget.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/StateSubwidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSteadyStateResult.h:21, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/SteadyStateWidget.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/TaskWidget.cpp:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/TaskWidget.cpp:56: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:195:18: warning: ‘virtual CIssue CEvaluationTree::compile()’ was hidden [-Woverloaded-virtual=] 195 | virtual CIssue compile(); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/TaskWidget.cpp:57: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:96:18: note: by ‘virtual CIssue CExpression::compile(CObjectInterface::ContainerList)’ 96 | virtual CIssue compile(CObjectInterface::ContainerList listOfContainer = | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:63: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:78: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:96: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:35: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:59: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.h: In constructor ‘CopasiUI3Window::CopasiUI3Window()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.h:626:8: warning: ‘CopasiUI3Window::mSBWIgnoreShutdownEvent’ will be initialized after [-Wreorder] 626 | bool mSBWIgnoreShutdownEvent; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.h:459:11: warning: ‘QMenu* CopasiUI3Window::mpMenuSEDMLSupport’ [-Wreorder] 459 | QMenu * mpMenuSEDMLSupport; | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:242:1: warning: when initialized here [-Wreorder] 242 | CopasiUI3Window::CopasiUI3Window(): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotUpdateMIRIAM()’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:2551:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 2551 | bool success = true; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:3856:22: required from here 3856 | for (auto & task : taskList) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotCheckForUpdateFinished(bool)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/copasiui3window.cpp:4195:24: warning: unused variable ‘pReject’ [-Wunused-variable] 4195 | QPushButton *pReject = Question.addButton(QMessageBox::Cancel); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartment.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:49: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelWidget.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/objectdebug.cpp /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:70: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:114: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMoietiesTaskResult.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:66: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::createWidgetFromId(const WidgetType&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 504 | switch (id) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findTabWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 837 | switch (id) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Model’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] 908 | switch (id) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/parametertable.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/parametertable.cpp:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:159:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 159 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/parametertable.cpp:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/parametertable.cpp:40: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1178:34: required from here 1178 | CDataVectorNS < CCompartment > mCompartments; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1193:30: required from here 1193 | CDataVectorNS< CReaction > mSteps; | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1198:26: required from here 1198 | CDataVectorN< CEvent > mEvents; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1208:31: required from here 1208 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CModel.h:1218:38: required from here 1218 | CDataVectorN< CModelParameterSet > mParameterSets; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:131:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 131 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/parametertable.cpp:43: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:820:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 820 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/parametertable.cpp: In member function ‘void ParameterTable::updateTable(CReactionInterface&, CReaction*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/parametertable.cpp:202:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 202 | switch (ri.getUsage(i)) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.cpp: In function ‘QVariant getParameterValue(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.cpp:73:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 73 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.cpp: In function ‘QList > getParameterValidValues(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.cpp:141:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 141 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.cpp: In function ‘bool setParameterValue(CCopasiParameter*, const QVariant&)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/qtUtilities.cpp:215:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 215 | switch (pParameter->getType()) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/resourcesUI/CQIconResource.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5425:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5428:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5431:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp: In member function ‘QVariant CQUndoDM::displayData(const QModelIndex&) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp:98:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | if (mpUndoStack->size() <= index.row() || | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp:107:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 107 | return (index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp:116:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 116 | if ((index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp:153:20: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 153 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp:197:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 197 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp:241:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 241 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp:104:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 104 | switch (static_cast< ColumnType >(index.column())) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp: In member function ‘virtual QVariant CQUndoDM::headerData(int, Qt::Orientation, int) const’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI/CQUndoDM.cpp:296:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 296 | switch (static_cast< ColumnType >(section)) | ^ In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:4504:77: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex 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Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex 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Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CLabel.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CQAutolayoutWizard.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI 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/usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI/moc_CQCurrentValueTable.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQModifiedDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp In member function ‘getSpeciesChanges’: lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 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copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex 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/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 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copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex 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-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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-I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCompartmentDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQCompartment.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCompartment.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCompartmentsWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQCopasiApplication.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG 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&& /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEFMWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEventDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExpandModelData.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQEventWidget1.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI 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-isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes 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-isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes 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/usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExpressionWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFittingItemWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFittingResult.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQExpressionWidget.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem 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-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQFittingResultTab1.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem 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/usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQModelWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMoietiesTaskResult.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQModelValue.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQModelValue.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQMoietiesTaskWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 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-Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterEstimationResult.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterGroupDM.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQOptimizationWidget.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQParameterGroupView.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI 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Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSensResultWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSimpleSelectionTree.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSpecieDM.cpp cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSortFilterProxyModel.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSpinBoxDelegate.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ 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-I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSplashWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQSpeciesDetail.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQSpeciesDetail.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_CQStartValueReset.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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-specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ObjectBrowserItem.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ObjectBrowserWidget.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_FunctionWidget1.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem 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-Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ReactionsWidget1.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_SliderDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_SliderSettingsDialog.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_ReactionsWidget1.cpp:10: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_StateSubwidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_SteadyStateWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_TaskWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_copasiWidget.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_copasiui3window.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_listviews.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_objectdebug.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_parametertable.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/moc_qtUtilities.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/qlayout -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoFramework -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/undoUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/resourcesUI/moc_CQIconResource.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI 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CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDialog.cpp.o /usr/bin/ranlib libCOPASIUI.a gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [100%] Built target libCOPASIUI /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' cd 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-DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/barChart -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/layoutUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/plotUI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/tex -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/wizard 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o -MF CMakeFiles/CopasiUI.dir/main.cpp.o.d -o CMakeFiles/CopasiUI.dir/main.cpp.o -c /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiUI/main.cpp In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiUI/main.cpp:44: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiUI/main.cpp:42: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:143:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 143 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:59:30: required from here 59 | CDataVectorN < CFunction > mLoadedFunctions; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CDataContainer.h:136:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 136 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [100%] Linking CXX executable CopasiUI cd /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiUI.dir/link.txt --verbose=1 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.h:40:7: warning: type ‘struct CQMmlScrollView’ violates the C++ One Definition Rule [-Wodr] 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.h:40:7: note: a different type is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.h:51:16: note: the first difference of corresponding definitions is field ‘mpMmlWidget’ 51 | QtMmlWidget* mpMmlWidget; | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.h:40:7: note: a type with different number of fields is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_del ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.cpp:58:1: note: ‘__dt_del ’ was previously declared here 58 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.cpp:58:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_comp ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.cpp:58:1: note: ‘__dt_comp ’ was previously declared here 58 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQMmlScrollView.cpp:58:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:4504:77: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new: In member function ‘start’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5425:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5428:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.cpp:5431:17: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/15/new: In member function ‘relocate’: /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ In member function ‘getSpeciesChanges’: lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/15/new:140:26: note: in a call to allocation function ‘operator new []’ declared here 140 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) | ^ /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMSpeciesDM.cpp: In member function ‘data’: /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/UI/CQEFMSpeciesDM.cpp:70:10: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 70 | QVariant CQEFMSpeciesDM::data(const QModelIndex &index, int role) const | ^ /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/lapack -I/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -Wl,--dependency-file=CMakeFiles/CopasiUI.dir/link.d CMakeFiles/CopasiUI.dir/main.cpp.o -o CopasiUI ../libCOPASIUI.a /usr/lib64/libQt5Concurrent.so.5.15.15 /usr/lib64/libQt5Network.so.5.15.15 /usr/lib64/libQt5OpenGL.so.5.15.15 /usr/lib64/libQt5PrintSupport.so.5.15.15 /usr/lib64/libQt5Svg.so.5.15.15 /usr/lib64/libQt5Widgets.so.5.15.15 /usr/lib64/libQt5Xml.so.5.15.15 /usr/lib64/libQt5DataVisualization.so.5.15.15 /usr/lib64/libQt5Gui.so.5.15.15 /usr/lib64/libQt5Core.so.5.15.15 ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so //usr/lib64/libuuid.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so /usr/lib64/libqwt-qt5.so /usr/lib64/libmml.so /usr/lib64/libqcustomplot-qt5.so /usr/lib64/libGL.so /usr/lib64/libGLU.so //usr/lib64/libSBW.so gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' [100%] Built target CopasiUI gmake[1]: Leaving directory '/builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.4D0eX2 + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + '[' /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT ++ dirname /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT + mkdir -p /builddir/build/BUILD/COPASI-4.44.295-build + mkdir /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-295 + DESTDIR=/builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT + /usr/bin/cmake --install . -- Install configuration: "Release" -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/_COPASI.so -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi.pth -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/COPASI.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/add_optitems.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/checkModel.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/custom_output.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example1.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example2.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example3.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example4.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example5.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example6.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example7.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example8.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/example9.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/get_steady_state.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/print_model_parameterset.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/process_callback.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/remove_reaction.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/remove_unused_elements.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/restore_names.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/run_mca.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/setup_sensitivities.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/to_local_parameters.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples/write_ids_to_names.py -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/bin/CopasiSE -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/bin/CopasiUI -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/bin/CopasiSBW -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/TutWiz-Step1.html -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/TutWiz-Step2.html -- Installing: 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/builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/OutputAssistant.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/PlotCurveSelectionDialog.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/PlotDefinition.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/PlotWindow.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/ReactionDialog.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/ReactionOverview.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/ReactionOverviewEmpty.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/ReportDefinitionDialog.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/doc/html/figures/TimeCourseDialog.png -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/CircadianClock.cps -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/DimericMWC-stiff.cps -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/Genetic-2000Elo.xml -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/MAPK-HF96-layout.cps -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/Metabolism-2000Poo.xml -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/NF-kappaB-model.xml -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/NF-kappaB.cps -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/NF-kappaB.sedml -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/Olsen2003_peroxidase.cps -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/YeastGlycolysis.gps -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/brusselator-model.xml -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/brusselator.cps -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/brusselator.sedml -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/oscli.xml -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/examples/scan.sedml -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/icons/copasi/icons/Copasi.ico -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/icons/copasi/icons/CopasiDoc.ico -- Installing: /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/copasi/config/MIRIAMResources.xml + rm -rf /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/examples + install -pm 644 copasi/UI/icons/Copasi48-Alpha.xpm /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/icons/copasi/icons + mkdir -p /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/applications + cat + mkdir -p /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/metainfo + install -pm 644 /builddir/build/SOURCES/COPASI.appdata.xml /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/metainfo/ + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 4.44.295-1.fc42 --unique-debug-suffix -4.44.295-1.fc42.aarch64 --unique-debug-src-base COPASI-4.44.295-1.fc42.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295 find-debuginfo: starting Extracting debug info from 4 files DWARF-compressing 4 files sepdebugcrcfix: Updated 4 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/COPASI-4.44.295-1.fc42.aarch64 cpio: copasi/CChemEqParser.ypp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser.ypp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser.ypp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_yacc.cpp: Cannot stat: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/CopasiDataModel/CDataModel.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/CopasiDataModel/CInfo.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/CopasiSBW/SBWTranslator.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/CopasiSE/CopasiSE.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/CopasiUI/main.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CBiologicalDescription.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CConstants.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CCreator.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CMIRIAMResource.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CModelMIRIAMInfo.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CModified.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFGraph.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFGraphConverter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFLiteral.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFNode.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFObject.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFPredicate.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFSubject.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFTriplet.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CRDFUtilities.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAM/CReference.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAMUI/CQCreatorDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAMUI/CQMiriamWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAMUI/CQModifiedDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAMUI/CQRDFTreeView.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAMUI/CQRDFTreeViewItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/MIRIAMUI/CQReferenceDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/OpenMP/CContext.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/OpenMP/CMathContext.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/OpenMP/CRandomContext.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/AboutDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: 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executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQBaseTreeDataModel.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQBrowserPane.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQBrowserPaneDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQCheckModelWindow.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQComboDelegate.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQCompartment.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQCompartmentCopyOptions.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQCompartmentDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQCompartmentsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQCopasiApplication.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQCrossSectionTaskWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQDependenciesWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQDependencyDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQDependencyWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQDifferentialEquations.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEFMListWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEFMNetReactionDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEFMReactionDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEFMResultWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEFMSpeciesDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEFMWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEventDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEventWidget1.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQEventsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQExpandModelData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQExperimentData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQExperimentSelection.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQExpressionMmlStackedWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQExpressionWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQFittingItemWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQFittingResult.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQFittingResultTab1.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQFittingWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQFluxModeDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQFunctionDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQFunctionsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQGlobalQuantitiesWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQGlobalQuantityDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQLNAWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQLayoutsDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQLayoutsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQLyapResultWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQLyapWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMCAWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMathMatrixWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMatrixDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMergingData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMessageBox.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMmlScrollView.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQModelValue.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQModelWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMoietiesTaskResult.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMoietiesTaskWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQMultipleSelectionDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQNameSelectionDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQNotes.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQOptPopulation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQOptimizationResult.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQOptimizationWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQParameterEstimationResult.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQParameterGroupDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQParameterGroupView.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQParameterOverviewDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQParameterOverviewWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQParameterResultItemModel.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQParameterSetsDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQParameterSetsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQPlotDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQPlotsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQPreferenceDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQProgressDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQProgressItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQProgressItemBar.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQProgressItemText.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQPushButtonDelegate.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQReactionDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQReactionsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQReportDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQReportDefinition.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQReportDefinitionSelect.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQReportListItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQReportsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSBMLFileDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSEDMLFileDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSEDMLImportDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQScanWidgetParameterSet.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQScrolledDependenciesWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSensResultWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSimpleSelectionTree.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSortFilterProxyModel.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSpecieDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSpeciesDetail.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSpeciesWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSplashWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQStartValueReset.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQSteadyStateResult.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTSSAResultSubWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTSSAResultWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTSSATimeScaleWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTSSAWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTabWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTableView.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTableWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTaskBtnWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTaskHeaderWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTaskMethodWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTaskThread.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTextDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQThread.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTimeSensWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTimeSeriesDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTimeSeriesWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQTrajectoryWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQUndoTester.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQUnitDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQUnitDetail.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQUnitsWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQUpdateAvogadro.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQValidator.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CQValidatorUnit.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CScanContainerWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CScanItemData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CScanWidgetRandom.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CScanWidgetRepeat.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CScanWidgetScan.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CScanWidgetTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CUpDownSubwidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CWindowInterface.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CopasiFileDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/CopasiSlider.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/DataModelGUI.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/DefaultplotDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/FunctionWidget1.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/MyLineEdit.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/ObjectBrowserDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/ObjectBrowserItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/ObjectBrowserWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/ReactionsWidget1.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/ScanWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/SensWidgetComboBox.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/SensitivitiesWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/SliderDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/SliderSettingsDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/StateSubwidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/SteadyStateWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/TaskWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/copasiWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/copasiui3window.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/listviews.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/objectdebug.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/parametertable.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/UI/qtUtilities.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/barChart/CQ3DBarsModifier.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/bindings/common/downcast_common.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/bindings/common/local_common.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/bindings/python/local.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/commandline/CConfigurationFile.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/commandline/CLocaleString.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/commandline/COptionParser.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/commandline/COptions.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalBase.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalCall.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalChoice.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalChoiceLogical.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalFraction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalFunction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalGeneralPower.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalItemPower.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalLcm.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalLogical.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalLogicalItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalProduct.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalSum.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/CNormalTranslation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/ConvertToCEvaluationNode.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/compareExpressions/compare_utilities.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CArray.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CArrayElementReference.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CCommonName.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CCore.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CDataArray.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CDataContainer.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CDataObject.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CDataObjectMap.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CDataString.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CDataTimer.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CObjectInterface.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CRegisteredCommonName.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/core/CRootContainer.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/crosssection/CCrossSectionMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/crosssection/CCrossSectionProblem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/crosssection/CCrossSectionTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CBitPatternMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CBitPatternTree.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CBitPatternTreeNode.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CEFMAlgorithm.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CEFMMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CEFMProblem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CEFMTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CFluxMode.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CFluxScore.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CStepMatrix.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CStepMatrixColumn.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CTableauLine.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CTableauMatrix.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/elementaryFluxModes/CZeroSet.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CCallParameters.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CDerive.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationLexer_lex.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNode.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeCall.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeChoice.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeConstant.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeDelay.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeFunction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeLogical.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeNumber.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeObject.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeOperator.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeStructure.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeUnit.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeVariable.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeVector.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationNodeWhiteSpace.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationParser_yacc.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CEvaluationTree.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CExpression.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CFunction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CFunctionAnalyzer.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CFunctionDB.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CFunctionParameter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CFunctionParameters.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CKinFunction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CMassAction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/function/CNodeK.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CAbstractLayoutInterface.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CCopasiSpringLayout.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLBase.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLColorDefinition.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLCurve.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLDefaultStyles.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLEllipse.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGlobalRenderInformation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGlobalStyle.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGlyphs.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGradientBase.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGradientStop.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGraphicalObject.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGraphicalPrimitive1D.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGraphicalPrimitive2D.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLGroup.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLImage.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLLineEnding.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLLinearGradient.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLLocalRenderInformation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLLocalStyle.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLPolygon.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRadialGradient.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLReactionGlyph.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRectangle.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRelAbsVector.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRenderCubicBezier.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRenderCurve.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRenderFlattener.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRenderInformationBase.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRenderPoint.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLRenderResolver.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLStyle.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLText.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLTransformation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLTransformation2D.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLUnresolvedReferenceException.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLayout.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLayoutEngine.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CLayoutState.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/CListOfLayouts.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layout/SBMLDocumentLoader.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layoutUI/CQAutolayoutWizard.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layoutUI/CQLayoutThread.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/layoutUI/CQSpringLayoutParameterWindow.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/lna/CLNAMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/lna/CLNAProblem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/lna/CLNATask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/lyap/CLyapMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/lyap/CLyapProblem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/lyap/CLyapTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/lyap/CLyapWolfMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CJitCompiler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CJitCompilerImplementation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathContainer.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathDelay.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathDependencyGraph.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathDependencyNode.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathDependencyNodeIterator.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathEvent.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathEventQueue.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathExpression.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathHistory.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathObject.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathReaction.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/math/CMathUpdateSequence.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CAnnotation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CChemEq.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CChemEqElement.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CChemEqInterface.cpp is executable but has no shebang, removing executable bit *** WARNING: 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removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CMetabNameInterface.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CModel.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CModelAnalyzer.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CModelExpansion.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CModelParameter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/model/CModelParameterGroup.cpp is executable but has no shebang, removing executable bit *** WARNING: 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removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/moieties/CMoietiesMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/moieties/CMoietiesProblem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/moieties/CMoietiesTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/CInternalSolver.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/CLSODA.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/CLSODAR.cpp is executable but has no shebang, removing executable bit *** WARNING: 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executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/decsol.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/dewset.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/dfnorm.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/dintdy.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/dmnorm.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/dprja.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/drcheck.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/dsolsy.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/odepack++/dstoda.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/CNL2SOL.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptLog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptLogEntry.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptLogItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodCoranaWalk.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodDE.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodEP.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodGA.cpp is executable but has no shebang, removing executable bit *** WARNING: 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./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodPraxis.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodSA.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodSRES.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodSS.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodStatistics.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodSteepestDescent.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptMethodTruncatedNewton.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptPopulationMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptProblem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/COptTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/CPraxis.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/CRandomSearch.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/CTruncatedNewton.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/optimization/FminBrent.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/output/COutputHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/parameterFitting/CExperiment.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/parameterFitting/CExperimentFileInfo.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/parameterFitting/CExperimentObjectMap.cpp is executable but has no shebang, removing executable bit *** WARNING: 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./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plot/CPlotItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plot/CPlotSpecification.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/BandedGraphWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/C2DCurveData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/C2DPlotCurve.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CBandedGraphData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CHistoCurveData.cpp is executable but 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./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CQDataVizPlot.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CQExtender.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CQMarchingSquares.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CQPlotColors.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CQPlotEditWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CQPlotSubwidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CQSpectogramWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CQwtPlot.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/CSpectorgramData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/HistoWidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/curve2dwidget.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/plotwindow.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/scrollbar.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/plotUI/scrollzoomer.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQAnimationControls.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQAnimationSettingsEditor.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQAnimationWindow.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQConnectionGraphicsItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQCopasiAnimation.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQCopasiEffect.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQCopasiGraphicsItem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQEffectDescription.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQEffectDescriptionEdit.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQElementProperties.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/qlayout/CQLabelGraphicsItem.cpp is executable but has no shebang, removing executable bit *** WARNING: 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executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/report/CReport.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/report/CReportDefinition.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/report/CReportDefinitionVector.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/resourcesUI/CQIconResource.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/sbml/CCellDesignerImporter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/sbml/CSBMLExporter.cpp is executable but has no shebang, removing executable bit *** WARNING: 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shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/scan/CScanTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/sedml/CSEDMLExporter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/sedml/SEDMLImporter.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/sedml/SEDMLUtils.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/sensitivities/CSensMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/sensitivities/CSensProblem.cpp is executable but has no shebang, removing executable bit *** WARNING: 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is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/steadystate/CSteadyStateProblem.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/steadystate/CSteadyStateTask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/tex/CMathMLToTeX.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/tex/CStructureParser.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/timesens/CTimeSensLsodaMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/timesens/CTimeSensMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: 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./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/tssanalysis/CTSSATask.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/undo/CData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/undo/CDataValue.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/undo/CUndoData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/undo/CUndoObjectInterface.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/undo/CUndoStack.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/undoUI/CQUndoDM.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/undoUI/CQUndoDialog.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CBaseUnit.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CBrent.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CCopasiException.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CCopasiMessage.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CCopasiMethod.cpp is executable but has no shebang, removing executable bit *** WARNING: 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but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CUnit.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CUnitComponent.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CUnitDefinition.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CUnitDefinitionDB.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CUnitParser.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/CUnitParser_lex.cpp is executable but has no shebang, removing executable bit *** WARNING: 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but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/dgemm.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/utilities/utility.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/wizard/wizard.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/CCopasiXML.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/CCopasiXMLInterface.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/CExpat.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/AssignmentHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/BoundingBoxHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/COPASIHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CXMLHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CXMLHandlerFactory.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CXMLParser.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CXMLParserData.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CallParameterHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ChannelSpecHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CharacterDataHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ColorDefinitionHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CommentHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CompartmentGlyphHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CompartmentHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ConstantHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CubicBezierHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/CurveHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/DimensionsHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/EllipseHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/EventHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/FunctionHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/GUIHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/GradientStopHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/GroupHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ImageHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/InitialStateHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/KineticLawHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/LayoutHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/LineEndingHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/LineSegmentHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/LinearGradientHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ListOfCurveSegmentsHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ListOfHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ListOfLayoutsHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/MathMLHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/MetaboliteGlyphHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/MetaboliteHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/MethodHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/MiriamAnnotationHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ModelHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ModelParameterGroupHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ModelParameterHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ModelParameterSetHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ModelValueHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ModifierHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ObjectHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ParameterDescriptionHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ParameterGroupHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ParameterHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ParameterTextHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/PlotItemHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/PlotSpecificationHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/PointHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/PolygonHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ProductHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/RadialGradientHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ReactionGlyphHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ReactionHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/RectangleHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/RenderCurveElementHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/RenderCurveHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/RenderInformationHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/RenderTextHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ReportDefinitionHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ReportSectionHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/ReportTargetHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/SBMLMapHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/SliderHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/SourceParameterHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/StateTemplateHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/StateTemplateVariableHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/StyleHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/SubstrateHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/TableHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/TaskHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/TextGlyphHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/UNKNOWNHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/UnitDefinitionHandler.cpp is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/COPASI-4.44.295-1.fc42.aarch64/copasi/xml/parser/UnsupportedAnnotationHandler.cpp is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/lib64/python3.13/site-packages/copasi/__pycache__/COPASI.cpython-313.pyc: rewriting with normalized contents Scanned 87 directories and 1737 files, processed 7 inodes, 1 modified (0 replaced + 1 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/COPASI-4.44.295-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.jCm2AX + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-295 + desktop-file-validate /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/applications/COPASI.desktop + appstream-util validate-relax --nonet /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/metainfo/COPASI.appdata.xml /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/metainfo/COPASI.appdata.xml: OK + RPM_EC=0 ++ jobs -p + exit 0 Processing files: COPASI-4.44.295-1.fc42.aarch64 Provides: COPASI = 4.44.295-1.fc42 COPASI(aarch-64) = 4.44.295-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Obsoletes: COPASI-sharp < 0:4.25.213-1 R-COPASI < 0:4.25.213-1 perl-COPASI < 0:4.25.213-1 Processing files: COPASI-gui-4.44.295-1.fc42.aarch64 Provides: COPASI-gui = 4.44.295-1.fc42 COPASI-gui(aarch-64) = 4.44.295-1.fc42 application() application(COPASI.desktop) metainfo() metainfo(COPASI.appdata.xml) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libCombine.so.0()(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5DataVisualization.so.5()(64bit) libQt5DataVisualization.so.5(Qt_5)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5PrintSupport.so.5()(64bit) libQt5PrintSupport.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libQt5Xml.so.5()(64bit) libQt5Xml.so.5(Qt_5)(64bit) libSBW.so.2.12()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmml.so.2()(64bit) libqcustomplot-qt5.so.2()(64bit) libqwt-qt5.so.6.2()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: COPASI-data-4.44.295-1.fc42.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.HfS3fO + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + cd COPASI-Build-295 + LICENSEDIR=/builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/ArtisticLicense.txt /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-data = 4.44.295-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-COPASI-4.44.295-1.fc42.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.sJQZEK + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + cd COPASI-Build-295 + LICENSEDIR=/builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/ArtisticLicense.txt /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-COPASI = 4.44.295-1.fc42 python3-COPASI = 4.44.295-1.fc42 python3-COPASI(aarch-64) = 4.44.295-1.fc42 python3.13-COPASI = 4.44.295-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libpython3.13.so.1.0()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 rtld(GNU_HASH) Obsoletes: python-COPASI < 4.44.295-1.fc42 python2-COPASI < 0:4.25.213-1 Processing files: COPASI-doc-4.44.295-1.fc42.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.cAUbl5 + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + cd COPASI-Build-295 + LICENSEDIR=/builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-4.44.295-build/COPASI-Build-295/copasi/ArtisticLicense.txt /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-doc = 4.44.295-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debugsource-4.44.295-1.fc42.aarch64 Provides: COPASI-debugsource = 4.44.295-1.fc42 COPASI-debugsource(aarch-64) = 4.44.295-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debuginfo-4.44.295-1.fc42.aarch64 Provides: COPASI-debuginfo = 4.44.295-1.fc42 COPASI-debuginfo(aarch-64) = 4.44.295-1.fc42 debuginfo(build-id) = b65759fae15bf1c5e1aa69f968a85e162e7bff1f Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(aarch-64) = 4.44.295-1.fc42 Processing files: COPASI-gui-debuginfo-4.44.295-1.fc42.aarch64 Provides: COPASI-gui-debuginfo = 4.44.295-1.fc42 COPASI-gui-debuginfo(aarch-64) = 4.44.295-1.fc42 debuginfo(build-id) = 6733c8f7cb6edf418ac14516a2aa8bba979b4ec8 debuginfo(build-id) = 95ccc8b3d2b91289f9a37673589d3bfbc54ed1a7 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(aarch-64) = 4.44.295-1.fc42 Processing files: python3-COPASI-debuginfo-4.44.295-1.fc42.aarch64 Provides: debuginfo(build-id) = b5144de6365a78a9a23026b71e02d7820e8984db python-COPASI-debuginfo = 4.44.295-1.fc42 python3-COPASI-debuginfo = 4.44.295-1.fc42 python3-COPASI-debuginfo(aarch-64) = 4.44.295-1.fc42 python3.13-COPASI-debuginfo = 4.44.295-1.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(aarch-64) = 4.44.295-1.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/COPASI-4.44.295-build/BUILDROOT Wrote: /builddir/build/RPMS/COPASI-debugsource-4.44.295-1.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/python3-COPASI-4.44.295-1.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/COPASI-gui-4.44.295-1.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/COPASI-4.44.295-1.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/COPASI-data-4.44.295-1.fc42.noarch.rpm Wrote: /builddir/build/RPMS/COPASI-doc-4.44.295-1.fc42.noarch.rpm Wrote: /builddir/build/RPMS/COPASI-debuginfo-4.44.295-1.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/python3-COPASI-debuginfo-4.44.295-1.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/COPASI-gui-debuginfo-4.44.295-1.fc42.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.u9YQIF + umask 022 + cd /builddir/build/BUILD/COPASI-4.44.295-build + test -d /builddir/build/BUILD/COPASI-4.44.295-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/COPASI-4.44.295-build + rm -rf /builddir/build/BUILD/COPASI-4.44.295-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild COPASI-4.44.295-1.fc42.src.rpm Finish: build phase for COPASI-4.44.295-1.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1734536648.812070/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/COPASI-4.44.295-1.fc42.src.rpm) Config(child) 19 minutes 39 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "COPASI-data", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "noarch" }, { "name": "python3-COPASI-debuginfo", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "aarch64" }, { "name": "python3-COPASI", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "aarch64" }, { "name": "COPASI-gui", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "aarch64" }, { "name": "COPASI", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "src" }, { "name": "COPASI-gui-debuginfo", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "aarch64" }, { "name": "COPASI-debugsource", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "aarch64" }, { "name": "COPASI", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "aarch64" }, { "name": "COPASI-debuginfo", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "aarch64" }, { "name": "COPASI-doc", "epoch": null, "version": "4.44.295", "release": "1.fc42", "arch": "noarch" } ] } RPMResults finished