Warning: Permanently added '100.29.16.237' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8430850-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64 Version: 1.2 PID: 9055 Logging PID: 9056 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8430850, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': '14a7a04ef7df6a10a08e20bb4e8aeaeb1870ba69', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/staden-io_lib', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'staden-io_lib', 'package_version': '1.14.8-4', 'project_dirname': 'gcc-15-smoketest-3', 'project_name': 'gcc-15-smoketest-3', 'project_owner': 'dmalcolm', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/dmalcolm/gcc-15-smoketest-3/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'https://fedorapeople.org/~dmalcolm/gcc/gcc-15-mass-prebuild/$basearch', 'id': 'https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch', 'name': 'Additional repo https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch'}], 'sandbox': 'dmalcolm/gcc-15-smoketest-3--dmalcolm', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'dmalcolm', 'tags': [], 'task_id': '8430850-fedora-rawhide-aarch64', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/staden-io_lib /var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/dmalcolm/gcc-15-smoketest-3/staden-io_lib', '/var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib'... Running: git checkout 14a7a04ef7df6a10a08e20bb4e8aeaeb1870ba69 -- cmd: ['git', 'checkout', '14a7a04ef7df6a10a08e20bb4e8aeaeb1870ba69', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib rc: 0 stdout: stderr: Note: switching to '14a7a04ef7df6a10a08e20bb4e8aeaeb1870ba69'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 14a7a04 automatic import of staden-io_lib Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading io_lib-1.14.8.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o io_lib-1.14.8.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/dmalcolm/gcc-15-smoketest-3/staden-io_lib/io_lib-1.14.8.tar.gz/md5/fe5ee6aaec8111a5bc3ac584a0c0c0c7/io_lib-1.14.8.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 2165k 100 2165k 0 0 20.0M 0 --:--:-- --:--:-- --:--:-- 20.1M INFO: Reading stdout from command: md5sum io_lib-1.14.8.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib/staden-io_lib.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734878024.029913 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.0 starting (python version = 3.13.0, NVR = mock-6.0-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib/staden-io_lib.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1734878024.029913 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib/staden-io_lib.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 6.0 INFO: Mock Version: 6.0 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734878024.029913/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Tagging container image as mock-bootstrap-637f935f-2bb2-44a2-9ed3-03995126d60d INFO: Checking that 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 image matches host's architecture INFO: Copy content of container 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734878024.029913/root INFO: mounting 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 with podman image mount INFO: image 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 as /var/lib/containers/storage/overlay/fafa28ff4385f12f4516fa483e755b1eb92586d70d99f7a5ad8577e28ec32290/merged INFO: umounting image 72b21bcd6e1d92e4a103a75cb251c27a4cb6e767088b169f430e58afbfc15414 (/var/lib/containers/storage/overlay/fafa28ff4385f12f4516fa483e755b1eb92586d70d99f7a5ad8577e28ec32290/merged) with podman image umount INFO: Removing image mock-bootstrap-637f935f-2bb2-44a2-9ed3-03995126d60d INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1734878024.029913/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 dnf5-5.2.8.1-2.fc42.aarch64 dnf5-plugins-5.2.8.1-2.fc42.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 33.3 MiB/s | 20.7 MiB | 00m01s Copr repository 100% | 120.3 MiB/s | 8.9 MiB | 00m00s Additional repo https_fedorapeople_org 100% | 92.5 KiB/s | 15.9 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.37-1.fc42 fedora 8.2 MiB bzip2 aarch64 1.0.8-19.fc42 copr_base 168.7 KiB coreutils aarch64 9.5-11.fc42 copr_base 7.9 MiB cpio aarch64 2.15-2.fc41 fedora 1.2 MiB diffutils aarch64 3.10-8.fc42 copr_base 1.7 MiB fedora-release-common noarch 42-0.11 fedora 19.8 KiB findutils aarch64 1:4.10.0-4.fc42 copr_base 1.9 MiB gawk aarch64 5.3.0-4.fc41 fedora 4.2 MiB glibc-minimal-langpack aarch64 2.40.9000-24.fc42 copr_base 0.0 B grep aarch64 3.11-9.fc42 copr_base 1.0 MiB gzip aarch64 1.13-2.fc42 copr_base 422.7 KiB info aarch64 7.1.1-2.fc42 fedora 613.6 KiB patch aarch64 2.7.6-25.fc42 copr_base 259.0 KiB redhat-rpm-config noarch 300-1.no_annobin.0.fc42 copr_base 186.6 KiB rpm-build aarch64 4.20.0-1.fc42 copr_base 516.9 KiB sed aarch64 4.9-3.fc42 copr_base 870.8 KiB shadow-utils aarch64 2:4.17.0~rc1-1.fc42 copr_base 4.5 MiB tar aarch64 2:1.35-4.fc41 fedora 3.1 MiB unzip aarch64 6.0-65.fc42 fedora 2.3 MiB util-linux aarch64 2.40.2-8.fc42 fedora 16.9 MiB which aarch64 2.21-42.fc41 fedora 248.2 KiB xz aarch64 1:5.6.3-2.fc42 fedora 1.5 MiB Installing dependencies: add-determinism aarch64 0.4.3-1.fc42 copr_base 2.0 MiB alternatives aarch64 1.31-1.fc42 fedora 88.7 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs aarch64 4.0.2-1.fc42 copr_base 415.2 KiB authselect aarch64 1.5.0-8.fc42 copr_base 179.9 KiB authselect-libs aarch64 1.5.0-8.fc42 copr_base 865.5 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils aarch64 2.43.50-9.fc42 copr_base 28.9 MiB build-reproducibility-srpm-macros noarch 0.4.3-1.fc42 copr_base 735.0 B bzip2-libs aarch64 1.0.8-19.fc42 copr_base 135.1 KiB ca-certificates noarch 2024.2.69_v8.0.401-3.fc42 fedora 2.6 MiB coreutils-common aarch64 9.5-11.fc42 copr_base 11.2 MiB cracklib aarch64 2.9.11-6.fc42 copr_base 417.7 KiB crypto-policies noarch 20241128-1.gitbb7b0b0.fc42 fedora 137.3 KiB curl aarch64 8.11.1-2.fc42 copr_base 451.9 KiB cyrus-sasl-lib aarch64 2.1.28-27.fc41 fedora 3.1 MiB debugedit aarch64 5.1-2.fc42 copr_base 241.5 KiB dwz aarch64 0.15-8.fc42 copr_base 319.6 KiB ed aarch64 1.20.2-2.fc41 fedora 282.8 KiB efi-srpm-macros noarch 5-13.fc42 fedora 40.2 KiB elfutils aarch64 0.192-7.fc42 copr_base 3.0 MiB elfutils-debuginfod-client aarch64 0.192-7.fc42 copr_base 141.3 KiB elfutils-default-yama-scope noarch 0.192-7.fc42 copr_base 1.8 KiB elfutils-libelf aarch64 0.192-7.fc42 copr_base 1.2 MiB elfutils-libs aarch64 0.192-7.fc42 copr_base 734.9 KiB fedora-gpg-keys noarch 42-0.3 fedora 126.4 KiB fedora-release noarch 42-0.11 fedora 0.0 B fedora-release-identity-basic noarch 42-0.11 fedora 719.0 B fedora-repos noarch 42-0.3 fedora 4.9 KiB fedora-repos-rawhide noarch 42-0.3 fedora 2.2 KiB file aarch64 5.45-8.fc42 fedora 139.5 KiB file-libs aarch64 5.45-8.fc42 fedora 10.0 MiB filesystem aarch64 3.18-29.fc42 fedora 106.0 B filesystem-srpm-macros noarch 3.18-29.fc42 fedora 36.1 KiB fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal aarch64 15.2-4.fc42 copr_base 12.6 MiB gdbm aarch64 1:1.23-7.fc41 fedora 928.5 KiB gdbm-libs aarch64 1:1.23-7.fc41 fedora 426.0 KiB ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B glibc aarch64 2.40.9000-24.fc42 copr_base 6.0 MiB glibc-common aarch64 2.40.9000-24.fc42 copr_base 1.3 MiB glibc-gconv-extra aarch64 2.40.9000-24.fc42 copr_base 18.3 MiB gmp aarch64 1:6.3.0-2.fc41 fedora 722.0 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-5.fc42 fedora 60.8 KiB jansson aarch64 2.14-1.fc42 copr_base 90.8 KiB json-c aarch64 0.18-1.fc42 copr_base 135.7 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs aarch64 1.6.3-4.fc42 copr_base 96.8 KiB krb5-libs aarch64 1.21.3-3.fc42 copr_base 2.5 MiB libacl aarch64 2.3.2-2.fc42 copr_base 66.3 KiB libarchive aarch64 3.7.7-1.fc42 copr_base 899.2 KiB libattr aarch64 2.5.2-4.fc41 fedora 196.6 KiB libblkid aarch64 2.40.2-8.fc42 fedora 418.6 KiB libbrotli aarch64 1.1.0-5.fc42 copr_base 904.3 KiB libcap aarch64 2.71-1.fc42 copr_base 498.5 KiB libcap-ng aarch64 0.8.5-3.fc42 copr_base 158.7 KiB libcom_err aarch64 1.47.1-6.fc42 fedora 239.3 KiB libcurl aarch64 8.11.1-2.fc42 copr_base 845.2 KiB libeconf aarch64 0.7.5-1.fc42 copr_base 78.7 KiB libevent aarch64 2.1.12-14.fc42 copr_base 1.1 MiB libfdisk aarch64 2.40.2-8.fc42 fedora 482.9 KiB libffi aarch64 3.4.6-3.fc42 fedora 282.4 KiB libgcc aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 218.8 KiB libgomp aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 501.0 KiB libidn2 aarch64 2.3.7-2.fc42 copr_base 327.7 KiB libmount aarch64 2.40.2-8.fc42 fedora 483.9 KiB libnghttp2 aarch64 1.64.0-1.fc42 fedora 262.2 KiB libnsl2 aarch64 2.0.1-2.fc42 copr_base 92.3 KiB libpkgconf aarch64 2.3.0-1.fc42 copr_base 132.0 KiB libpsl aarch64 0.21.5-4.fc42 copr_base 131.2 KiB libpwquality aarch64 1.4.5-11.fc42 copr_base 604.7 KiB libselinux aarch64 3.8-0.rc3.1.fc42 fedora 195.6 KiB libsemanage aarch64 3.8-0.rc3.1.fc42 fedora 353.3 KiB libsepol aarch64 3.8-0.rc3.1.fc42 fedora 796.3 KiB libsmartcols aarch64 2.40.2-8.fc42 fedora 288.5 KiB libssh aarch64 0.11.1-1.fc42 copr_base 575.7 KiB libssh-config noarch 0.11.1-1.fc42 copr_base 277.0 B libstdc++ aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 2.7 MiB libtasn1 aarch64 4.19.0-9.fc42 copr_base 217.7 KiB libtirpc aarch64 1.3.6-1.fc42 fedora 212.9 KiB libtool-ltdl aarch64 2.5.4-1.fc42 copr_base 92.1 KiB libunistring aarch64 1.1-8.fc42 copr_base 1.7 MiB libuuid aarch64 2.40.2-8.fc42 fedora 197.5 KiB libverto aarch64 0.3.2-9.fc41 fedora 197.5 KiB libxcrypt aarch64 4.4.36-12.fc42 fedora 269.3 KiB libxml2 aarch64 2.12.8-2.fc42 copr_base 1.9 MiB libzstd aarch64 1.5.6-2.fc41 fedora 796.0 KiB lua-libs aarch64 5.4.7-1.fc42 fedora 393.1 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs aarch64 1.10.0-1.fc42 copr_base 195.5 KiB mpfr aarch64 4.2.1-5.fc42 copr_base 748.3 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs aarch64 6.5-2.20240629.fc41 fedora 2.2 MiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap aarch64 2.6.8-6.fc42 copr_base 747.0 KiB openssl-libs aarch64 1:3.2.2-8.fc42 copr_base 6.3 MiB p11-kit aarch64 0.25.5-4.fc42 copr_base 2.3 MiB p11-kit-trust aarch64 0.25.5-4.fc42 copr_base 456.7 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam aarch64 1.7.0-3.fc42 copr_base 4.2 MiB pam-libs aarch64 1.7.0-3.fc42 copr_base 218.7 KiB pcre2 aarch64 10.44-1.fc42.1 copr_base 644.5 KiB pcre2-syntax noarch 10.44-1.fc42.1 copr_base 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf aarch64 2.3.0-1.fc42 copr_base 111.1 KiB pkgconf-m4 noarch 2.3.0-1.fc42 copr_base 14.4 KiB pkgconf-pkg-config aarch64 2.3.0-1.fc42 copr_base 990.0 B popt aarch64 1.19-7.fc42 copr_base 142.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.16.3-1.fc42 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 copr_base 500.0 B qt6-srpm-macros noarch 6.8.1-4.fc42 copr_base 456.0 B readline aarch64 8.2-11.fc42 copr_base 553.5 KiB rpm aarch64 4.20.0-1.fc42 copr_base 3.3 MiB rpm-build-libs aarch64 4.20.0-1.fc42 copr_base 196.0 KiB rpm-libs aarch64 4.20.0-1.fc42 copr_base 718.1 KiB rpm-sequoia aarch64 1.7.0-3.fc42 copr_base 2.2 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs aarch64 3.47.2-1.fc42 copr_base 1.4 MiB systemd-libs aarch64 257.1-1.fc42 fedora 2.4 MiB util-linux-core aarch64 2.40.2-8.fc42 fedora 6.2 MiB xxhash-libs aarch64 0.8.2-4.fc42 fedora 212.3 KiB xz-libs aarch64 1:5.6.3-2.fc42 fedora 266.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip aarch64 3.0-42.fc42 fedora 755.7 KiB zlib-ng-compat aarch64 2.2.2-1.fc42 fedora 133.8 KiB zstd aarch64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 155 packages Total size of inbound packages is 50 MiB. Need to download 50 MiB. After this operation, 226 MiB extra will be used (install 226 MiB, remove 0 B). [ 1/155] fedora-release-common-0:42-0. 100% | 1.9 MiB/s | 23.9 KiB | 00m00s [ 2/155] cpio-0:2.15-2.fc41.aarch64 100% | 16.7 MiB/s | 291.3 KiB | 00m00s [ 3/155] bash-0:5.2.37-1.fc42.aarch64 100% | 77.9 MiB/s | 1.8 MiB | 00m00s [ 4/155] gawk-0:5.3.0-4.fc41.aarch64 100% | 88.1 MiB/s | 1.1 MiB | 00m00s [ 5/155] info-0:7.1.1-2.fc42.aarch64 100% | 22.1 MiB/s | 181.3 KiB | 00m00s [ 6/155] tar-2:1.35-4.fc41.aarch64 100% | 139.1 MiB/s | 854.7 KiB | 00m00s [ 7/155] unzip-0:6.0-65.fc42.aarch64 100% | 36.2 MiB/s | 185.5 KiB | 00m00s [ 8/155] which-0:2.21-42.fc41.aarch64 100% | 13.5 MiB/s | 41.5 KiB | 00m00s [ 9/155] util-linux-0:2.40.2-8.fc42.aa 100% | 130.2 MiB/s | 1.2 MiB | 00m00s [ 10/155] xz-1:5.6.3-2.fc42.aarch64 100% | 77.5 MiB/s | 476.1 KiB | 00m00s [ 11/155] bzip2-0:1.0.8-19.fc42.aarch64 100% | 4.9 MiB/s | 50.0 KiB | 00m00s [ 12/155] diffutils-0:3.10-8.fc42.aarch 100% | 42.1 MiB/s | 387.7 KiB | 00m00s [ 13/155] findutils-1:4.10.0-4.fc42.aar 100% | 105.7 MiB/s | 541.0 KiB | 00m00s [ 14/155] glibc-minimal-langpack-0:2.40 100% | 39.9 MiB/s | 122.4 KiB | 00m00s [ 15/155] coreutils-0:9.5-11.fc42.aarch 100% | 52.9 MiB/s | 920.7 KiB | 00m00s [ 16/155] grep-0:3.11-9.fc42.aarch64 100% | 92.9 MiB/s | 285.2 KiB | 00m00s [ 17/155] gzip-0:1.13-2.fc42.aarch64 100% | 52.5 MiB/s | 161.1 KiB | 00m00s [ 18/155] patch-0:2.7.6-25.fc42.aarch64 100% | 40.3 MiB/s | 123.7 KiB | 00m00s [ 19/155] redhat-rpm-config-0:300-1.no_ 100% | 37.4 MiB/s | 76.6 KiB | 00m00s [ 20/155] rpm-build-0:4.20.0-1.fc42.aar 100% | 33.4 MiB/s | 68.5 KiB | 00m00s [ 21/155] sed-0:4.9-3.fc42.aarch64 100% | 59.5 MiB/s | 304.9 KiB | 00m00s [ 22/155] filesystem-0:3.18-29.fc42.aar 100% | 155.3 MiB/s | 1.1 MiB | 00m00s [ 23/155] ncurses-libs-0:6.5-2.20240629 100% | 79.7 MiB/s | 326.5 KiB | 00m00s [ 24/155] fedora-repos-0:42-0.3.noarch 100% | 9.0 MiB/s | 9.2 KiB | 00m00s [ 25/155] shadow-utils-2:4.17.0~rc1-1.f 100% | 101.8 MiB/s | 1.2 MiB | 00m00s [ 26/155] gmp-1:6.3.0-2.fc41.aarch64 100% | 65.9 MiB/s | 270.1 KiB | 00m00s [ 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authselect-0:1.5.0-8.fc42.aar 100% | 68.5 MiB/s | 140.4 KiB | 00m00s [130/155] libnsl2-0:2.0.1-2.fc42.aarch6 100% | 14.1 MiB/s | 28.8 KiB | 00m00s [131/155] libpwquality-0:1.4.5-11.fc42. 100% | 50.9 MiB/s | 104.3 KiB | 00m00s [132/155] libtasn1-0:4.19.0-9.fc42.aarc 100% | 23.4 MiB/s | 71.9 KiB | 00m00s [133/155] cracklib-0:2.9.11-6.fc42.aarc 100% | 37.8 MiB/s | 77.5 KiB | 00m00s [134/155] keyutils-libs-0:1.6.3-4.fc42. 100% | 10.0 MiB/s | 30.8 KiB | 00m00s [135/155] elfutils-default-yama-scope-0 100% | 12.7 MiB/s | 13.0 KiB | 00m00s [136/155] json-c-0:0.18-1.fc42.aarch64 100% | 20.9 MiB/s | 42.8 KiB | 00m00s [137/155] gdb-minimal-0:15.2-4.fc42.aar 100% | 245.3 MiB/s | 3.9 MiB | 00m00s [138/155] xxhash-libs-0:0.8.2-4.fc42.aa 100% | 16.9 MiB/s | 34.6 KiB | 00m00s [139/155] libcurl-0:8.11.1-2.fc42.aarch 100% | 116.8 MiB/s | 358.9 KiB | 00m00s [140/155] libnghttp2-0:1.64.0-1.fc42.aa 100% | 37.5 MiB/s | 76.8 KiB | 00m00s [141/155] fedora-release-0:42-0.11.noar 100% | 12.7 MiB/s | 13.0 KiB | 00m00s [142/155] fedora-release-identity-basic 100% | 13.5 MiB/s | 13.8 KiB | 00m00s [143/155] libbrotli-0:1.1.0-5.fc42.aarc 100% | 83.1 MiB/s | 340.4 KiB | 00m00s [144/155] libidn2-0:2.3.7-2.fc42.aarch6 100% | 54.5 MiB/s | 111.7 KiB | 00m00s [145/155] libpsl-0:0.21.5-4.fc42.aarch6 100% | 31.1 MiB/s | 63.7 KiB | 00m00s [146/155] publicsuffix-list-dafsa-0:202 100% | 28.5 MiB/s | 58.3 KiB | 00m00s [147/155] libssh-0:0.11.1-1.fc42.aarch6 100% | 55.0 MiB/s | 225.4 KiB | 00m00s [148/155] openldap-0:2.6.8-6.fc42.aarch 100% | 78.4 MiB/s | 240.8 KiB | 00m00s [149/155] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 152.4 MiB/s | 780.2 KiB | 00m00s [150/155] libevent-0:2.1.12-14.fc42.aar 100% | 78.8 MiB/s | 242.2 KiB | 00m00s [151/155] libtool-ltdl-0:2.5.4-1.fc42.a 100% | 16.7 MiB/s | 34.3 KiB | 00m00s [152/155] libssh-config-0:0.11.1-1.fc42 100% | 4.8 MiB/s | 9.9 KiB | 00m00s [153/155] libunistring-0:1.1-8.fc42.aar 100% | 87.4 MiB/s | 537.0 KiB | 00m00s [154/155] libstdc++-0:15.0.0-0.2.fc42.a 100% | 3.6 MiB/s | 760.1 KiB | 00m00s [155/155] libgomp-0:15.0.0-0.2.fc42.aar 100% | 1.8 MiB/s | 322.1 KiB | 00m00s -------------------------------------------------------------------------------- [155/155] Total 100% | 69.3 MiB/s | 50.0 MiB | 00m01s Running transaction Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing OpenPGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. [ 1/157] Verify package files 100% | 676.0 B/s | 155.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-29.fc42.aarch64 >>> Finished pre-transaction scriptlet: filesystem-0:3.18-29.fc42.aarch64 >>> [RPM] /var/lib/mock/fedora-rawhide-aarch64-1734878024.029913/root/var/cache/ [ 2/157] Prepare transaction 100% | 2.4 KiB/s | 155.0 B | 00m00s [ 3/157] Installing libgcc-0:15.0.0-0. 100% | 107.7 MiB/s | 220.5 KiB | 00m00s [ 4/157] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/157] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 6/157] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s [ 7/157] Installing fedora-repos-rawhi 100% | 2.4 MiB/s | 2.4 KiB | 00m00s [ 8/157] Installing fedora-gpg-keys-0: 100% | 28.0 MiB/s | 172.2 KiB | 00m00s [ 9/157] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/157] Installing fedora-release-com 100% | 23.6 MiB/s | 24.1 KiB | 00m00s [ 11/157] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/157] Installing setup-0:2.15.0-5.f 100% | 44.3 MiB/s | 726.1 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/157] Installing filesystem-0:3.18- 100% | 2.5 MiB/s | 212.6 KiB | 00m00s [ 14/157] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/157] Installing coreutils-common-0 100% | 310.8 MiB/s | 11.2 MiB | 00m00s [ 16/157] Installing pcre2-syntax-0:10. 100% | 248.1 MiB/s | 254.1 KiB | 00m00s [ 17/157] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 18/157] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [ 19/157] Installing qt5-srpm-macros-0: 100% | 757.8 KiB/s | 776.0 B | 00m00s [ 20/157] Installing ncurses-base-0:6.5 100% | 49.1 MiB/s | 351.7 KiB | 00m00s [ 21/157] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 22/157] Installing ncurses-libs-0:6.5 100% | 321.2 MiB/s | 2.2 MiB | 00m00s [ 23/157] Installing glibc-0:2.40.9000- 100% | 261.5 MiB/s | 6.0 MiB | 00m00s [ 24/157] Installing bash-0:5.2.37-1.fc 100% | 316.6 MiB/s | 8.2 MiB | 00m00s [ 25/157] Installing glibc-common-0:2.4 100% | 163.8 MiB/s | 1.3 MiB | 00m00s [ 26/157] Installing glibc-gconv-extra- 100% | 354.5 MiB/s | 18.4 MiB | 00m00s [ 27/157] Installing zlib-ng-compat-0:2 100% | 131.5 MiB/s | 134.6 KiB | 00m00s [ 28/157] Installing xz-libs-1:5.6.3-2. 100% | 261.2 MiB/s | 267.5 KiB | 00m00s [ 29/157] Installing bzip2-libs-0:1.0.8 100% | 133.0 MiB/s | 136.2 KiB | 00m00s [ 30/157] Installing libuuid-0:2.40.2-8 100% | 194.0 MiB/s | 198.6 KiB | 00m00s [ 31/157] Installing popt-0:1.19-7.fc42 100% | 48.7 MiB/s | 149.5 KiB | 00m00s [ 32/157] Installing readline-0:8.2-11. 100% | 271.3 MiB/s | 555.7 KiB | 00m00s [ 33/157] Installing libblkid-0:2.40.2- 100% | 204.9 MiB/s | 419.7 KiB | 00m00s [ 34/157] Installing gmp-1:6.3.0-2.fc41 100% | 235.8 MiB/s | 724.2 KiB | 00m00s [ 35/157] Installing libattr-0:2.5.2-4. 100% | 192.9 MiB/s | 197.5 KiB | 00m00s [ 36/157] Installing libacl-0:2.3.2-2.f 100% | 65.5 MiB/s | 67.1 KiB | 00m00s [ 37/157] Installing libxcrypt-0:4.4.36 100% | 132.8 MiB/s | 272.0 KiB | 00m00s [ 38/157] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.3 KiB | 00m00s [ 39/157] Installing elfutils-libelf-0: 100% | 296.6 MiB/s | 1.2 MiB | 00m00s [ 40/157] Installing libstdc++-0:15.0.0 100% | 300.0 MiB/s | 2.7 MiB | 00m00s [ 41/157] Installing libeconf-0:0.7.5-1 100% | 78.5 MiB/s | 80.3 KiB | 00m00s [ 42/157] Installing gdbm-libs-1:1.23-7 100% | 417.7 MiB/s | 427.7 KiB | 00m00s [ 43/157] Installing dwz-0:0.15-8.fc42. 100% | 156.7 MiB/s | 321.0 KiB | 00m00s [ 44/157] Installing mpfr-0:4.2.1-5.fc4 100% | 244.1 MiB/s | 749.9 KiB | 00m00s [ 45/157] Installing gawk-0:5.3.0-4.fc4 100% | 387.6 MiB/s | 4.3 MiB | 00m00s [ 46/157] Installing unzip-0:6.0-65.fc4 100% | 570.7 MiB/s | 2.3 MiB | 00m00s [ 47/157] Installing file-libs-0:5.45-8 100% | 586.0 MiB/s | 10.0 MiB | 00m00s [ 48/157] Installing file-0:5.45-8.fc42 100% | 15.3 MiB/s | 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libmount-0:2.40.2- 100% | 236.8 MiB/s | 485.1 KiB | 00m00s [ 62/157] Installing alternatives-0:1.3 100% | 88.2 MiB/s | 90.3 KiB | 00m00s [ 63/157] Installing libcap-ng-0:0.8.5- 100% | 156.8 MiB/s | 160.6 KiB | 00m00s [ 64/157] Installing audit-libs-0:4.0.2 100% | 203.8 MiB/s | 417.3 KiB | 00m00s [ 65/157] Installing pam-libs-0:1.7.0-3 100% | 108.0 MiB/s | 221.1 KiB | 00m00s [ 66/157] Installing libcap-0:2.71-1.fc 100% | 163.9 MiB/s | 503.5 KiB | 00m00s [ 67/157] Installing systemd-libs-0:257 100% | 302.8 MiB/s | 2.4 MiB | 00m00s [ 68/157] Installing libcom_err-0:1.47. 100% | 234.8 MiB/s | 240.4 KiB | 00m00s [ 69/157] Installing libtasn1-0:4.19.0- 100% | 214.4 MiB/s | 219.5 KiB | 00m00s [ 70/157] Installing p11-kit-0:0.25.5-4 100% | 195.0 MiB/s | 2.3 MiB | 00m00s [ 71/157] Installing libunistring-0:1.1 100% | 290.3 MiB/s | 1.7 MiB | 00m00s [ 72/157] Installing libidn2-0:2.3.7-2. 100% | 108.6 MiB/s | 333.6 KiB | 00m00s [ 73/157] Installing libpsl-0:0.21.5-4. 100% | 129.2 MiB/s | 132.3 KiB | 00m00s [ 74/157] Installing p11-kit-trust-0:0. 100% | 44.8 MiB/s | 458.4 KiB | 00m00s [ 75/157] Installing openssl-libs-1:3.2 100% | 272.1 MiB/s | 6.3 MiB | 00m00s [ 76/157] Installing coreutils-0:9.5-11 100% | 240.4 MiB/s | 7.9 MiB | 00m00s [ 77/157] Installing ca-certificates-0: 100% | 1.4 MiB/s | 2.4 MiB | 00m02s [ 78/157] Installing gzip-0:1.13-2.fc42 100% | 104.6 MiB/s | 428.3 KiB | 00m00s [ 79/157] Installing authselect-libs-0: 100% | 107.5 MiB/s | 880.5 KiB | 00m00s [ 80/157] Installing cracklib-0:2.9.11- 100% | 83.8 MiB/s | 429.0 KiB | 00m00s [ 81/157] Installing libpwquality-0:1.4 100% | 100.4 MiB/s | 617.1 KiB | 00m00s [ 82/157] Installing rpm-sequoia-0:1.7. 100% | 277.8 MiB/s | 2.2 MiB | 00m00s [ 83/157] Installing libevent-0:2.1.12- 100% | 213.9 MiB/s | 1.1 MiB | 00m00s [ 84/157] Installing util-linux-core-0: 100% | 387.7 MiB/s | 6.2 MiB | 00m00s [ 85/157] Installing libsemanage-0:3.8- 100% | 115.6 MiB/s | 355.0 KiB | 00m00s [ 86/157] Installing shadow-utils-2:4.1 100% | 169.0 MiB/s | 4.6 MiB | 00m00s [ 87/157] Installing tar-2:1.35-4.fc41. 100% | 255.6 MiB/s | 3.1 MiB | 00m00s [ 88/157] Installing zstd-0:1.5.6-2.fc4 100% | 281.8 MiB/s | 1.7 MiB | 00m00s [ 89/157] Installing zip-0:3.0-42.fc42. 100% | 185.4 MiB/s | 759.6 KiB | 00m00s [ 90/157] Installing gdbm-1:1.23-7.fc41 100% | 227.9 MiB/s | 933.4 KiB | 00m00s [ 91/157] Installing cyrus-sasl-lib-0:2 100% | 345.2 MiB/s | 3.1 MiB | 00m00s [ 92/157] Installing libfdisk-0:2.40.2- 100% | 236.3 MiB/s | 483.9 KiB | 00m00s [ 93/157] Installing bzip2-0:1.0.8-19.f 100% | 84.6 MiB/s | 173.2 KiB | 00m00s [ 94/157] Installing libxml2-0:2.12.8-2 100% | 265.9 MiB/s | 1.9 MiB | 00m00s [ 95/157] Installing libarchive-0:3.7.7 100% | 220.0 MiB/s | 901.2 KiB | 00m00s [ 96/157] Installing add-determinism-0: 100% | 292.0 MiB/s | 2.0 MiB | 00m00s [ 97/157] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 98/157] Installing sqlite-libs-0:3.47 100% | 283.0 MiB/s | 1.4 MiB | 00m00s [ 99/157] Installing rpm-libs-0:4.20.0- 100% | 234.3 MiB/s | 719.6 KiB | 00m00s [100/157] Installing ed-0:1.20.2-2.fc41 100% | 139.2 MiB/s | 285.1 KiB | 00m00s [101/157] Installing patch-0:2.7.6-25.f 100% | 127.2 MiB/s | 260.5 KiB | 00m00s [102/157] Installing filesystem-srpm-ma 100% | 35.9 MiB/s | 36.8 KiB | 00m00s [103/157] Installing elfutils-default-y 100% | 291.9 KiB/s | 2.0 KiB | 00m00s [104/157] Installing elfutils-libs-0:0. 100% | 179.8 MiB/s | 736.6 KiB | 00m00s [105/157] Installing cpio-0:2.15-2.fc41 100% | 174.4 MiB/s | 1.2 MiB | 00m00s [106/157] Installing diffutils-0:3.10-8 100% | 208.0 MiB/s | 1.7 MiB | 00m00s [107/157] Installing libpkgconf-0:2.3.0 100% | 130.0 MiB/s | 133.1 KiB | 00m00s [108/157] Installing pkgconf-0:2.3.0-1. 100% | 110.9 MiB/s | 113.6 KiB | 00m00s [109/157] Installing pkgconf-pkg-config 100% | 0.0 B/s | 1.8 KiB | 00m00s [110/157] Installing jansson-0:2.14-1.f 100% | 90.0 MiB/s | 92.2 KiB | 00m00s [111/157] Installing libverto-0:0.3.2-9 100% | 194.7 MiB/s | 199.3 KiB | 00m00s [112/157] Installing libgomp-0:15.0.0-0 100% | 245.3 MiB/s | 502.4 KiB | 00m00s [113/157] Installing rpm-build-libs-0:4 100% | 192.2 MiB/s | 196.8 KiB | 00m00s [114/157] Installing keyutils-libs-0:1. 100% | 95.9 MiB/s | 98.2 KiB | 00m00s [115/157] Installing krb5-libs-0:1.21.3 100% | 249.7 MiB/s | 2.5 MiB | 00m00s [116/157] Installing libtirpc-0:1.3.6-1 100% | 209.7 MiB/s | 214.7 KiB | 00m00s [117/157] Installing libnsl2-0:2.0.1-2. 100% | 91.2 MiB/s | 93.4 KiB | 00m00s [118/157] Installing pam-0:1.7.0-3.fc42 100% | 201.7 MiB/s | 4.2 MiB | 00m00s [119/157] Installing libssh-0:0.11.1-1. 100% | 188.1 MiB/s | 577.8 KiB | 00m00s [120/157] Installing json-c-0:0.18-1.fc 100% | 133.7 MiB/s | 137.0 KiB | 00m00s [121/157] Installing xxhash-libs-0:0.8. 100% | 208.7 MiB/s | 213.7 KiB | 00m00s [122/157] Installing libnghttp2-0:1.64. 100% | 257.1 MiB/s | 263.3 KiB | 00m00s [123/157] Installing libbrotli-0:1.1.0- 100% | 221.3 MiB/s | 906.6 KiB | 00m00s [124/157] Installing libtool-ltdl-0:2.5 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rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [138/157] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [139/157] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [140/157] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [141/157] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [142/157] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [143/157] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [144/157] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [145/157] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [146/157] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [147/157] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [148/157] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [149/157] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [150/157] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [151/157] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s [152/157] Installing rpm-build-0:4.20.0 100% | 171.0 MiB/s | 525.4 KiB | 00m00s [153/157] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [154/157] Installing util-linux-0:2.40. 100% | 339.1 MiB/s | 17.0 MiB | 00m00s [155/157] Installing authselect-0:1.5.0 100% | 60.0 MiB/s | 184.3 KiB | 00m00s [156/157] Installing which-0:2.21-42.fc 100% | 122.2 MiB/s | 250.4 KiB | 00m00s [157/157] Installing info-0:7.1.1-2.fc4 100% | 281.4 KiB/s | 614.0 KiB | 00m02s Warning: skipped OpenPGP checks for 81 packages from repositories: copr_base, https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.3-1.fc42.aarch64 alternatives-1.31-1.fc42.aarch64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc42.aarch64 authselect-1.5.0-8.fc42.aarch64 authselect-libs-1.5.0-8.fc42.aarch64 basesystem-11-21.fc41.noarch bash-5.2.37-1.fc42.aarch64 binutils-2.43.50-9.fc42.aarch64 build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch bzip2-1.0.8-19.fc42.aarch64 bzip2-libs-1.0.8-19.fc42.aarch64 ca-certificates-2024.2.69_v8.0.401-3.fc42.noarch coreutils-9.5-11.fc42.aarch64 coreutils-common-9.5-11.fc42.aarch64 cpio-2.15-2.fc41.aarch64 cracklib-2.9.11-6.fc42.aarch64 crypto-policies-20241128-1.gitbb7b0b0.fc42.noarch curl-8.11.1-2.fc42.aarch64 cyrus-sasl-lib-2.1.28-27.fc41.aarch64 debugedit-5.1-2.fc42.aarch64 diffutils-3.10-8.fc42.aarch64 dwz-0.15-8.fc42.aarch64 ed-1.20.2-2.fc41.aarch64 efi-srpm-macros-5-13.fc42.noarch elfutils-0.192-7.fc42.aarch64 elfutils-debuginfod-client-0.192-7.fc42.aarch64 elfutils-default-yama-scope-0.192-7.fc42.noarch elfutils-libelf-0.192-7.fc42.aarch64 elfutils-libs-0.192-7.fc42.aarch64 fedora-gpg-keys-42-0.3.noarch fedora-release-42-0.11.noarch fedora-release-common-42-0.11.noarch fedora-release-identity-basic-42-0.11.noarch fedora-repos-42-0.3.noarch fedora-repos-rawhide-42-0.3.noarch file-5.45-8.fc42.aarch64 file-libs-5.45-8.fc42.aarch64 filesystem-3.18-29.fc42.aarch64 filesystem-srpm-macros-3.18-29.fc42.noarch findutils-4.10.0-4.fc42.aarch64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.aarch64 gdb-minimal-15.2-4.fc42.aarch64 gdbm-1.23-7.fc41.aarch64 gdbm-libs-1.23-7.fc41.aarch64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-24.fc42.aarch64 glibc-common-2.40.9000-24.fc42.aarch64 glibc-gconv-extra-2.40.9000-24.fc42.aarch64 glibc-minimal-langpack-2.40.9000-24.fc42.aarch64 gmp-6.3.0-2.fc41.aarch64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-5.fc42.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc42.aarch64 gzip-1.13-2.fc42.aarch64 info-7.1.1-2.fc42.aarch64 jansson-2.14-1.fc42.aarch64 json-c-0.18-1.fc42.aarch64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc42.aarch64 krb5-libs-1.21.3-3.fc42.aarch64 libacl-2.3.2-2.fc42.aarch64 libarchive-3.7.7-1.fc42.aarch64 libattr-2.5.2-4.fc41.aarch64 libblkid-2.40.2-8.fc42.aarch64 libbrotli-1.1.0-5.fc42.aarch64 libcap-2.71-1.fc42.aarch64 libcap-ng-0.8.5-3.fc42.aarch64 libcom_err-1.47.1-6.fc42.aarch64 libcurl-8.11.1-2.fc42.aarch64 libeconf-0.7.5-1.fc42.aarch64 libevent-2.1.12-14.fc42.aarch64 libfdisk-2.40.2-8.fc42.aarch64 libffi-3.4.6-3.fc42.aarch64 libgcc-15.0.0-0.2.fc42.aarch64 libgomp-15.0.0-0.2.fc42.aarch64 libidn2-2.3.7-2.fc42.aarch64 libmount-2.40.2-8.fc42.aarch64 libnghttp2-1.64.0-1.fc42.aarch64 libnsl2-2.0.1-2.fc42.aarch64 libpkgconf-2.3.0-1.fc42.aarch64 libpsl-0.21.5-4.fc42.aarch64 libpwquality-1.4.5-11.fc42.aarch64 libselinux-3.8-0.rc3.1.fc42.aarch64 libsemanage-3.8-0.rc3.1.fc42.aarch64 libsepol-3.8-0.rc3.1.fc42.aarch64 libsmartcols-2.40.2-8.fc42.aarch64 libssh-0.11.1-1.fc42.aarch64 libssh-config-0.11.1-1.fc42.noarch libstdc++-15.0.0-0.2.fc42.aarch64 libtasn1-4.19.0-9.fc42.aarch64 libtirpc-1.3.6-1.fc42.aarch64 libtool-ltdl-2.5.4-1.fc42.aarch64 libunistring-1.1-8.fc42.aarch64 libuuid-2.40.2-8.fc42.aarch64 libverto-0.3.2-9.fc41.aarch64 libxcrypt-4.4.36-12.fc42.aarch64 libxml2-2.12.8-2.fc42.aarch64 libzstd-1.5.6-2.fc41.aarch64 lua-libs-5.4.7-1.fc42.aarch64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc42.aarch64 mpfr-4.2.1-5.fc42.aarch64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.aarch64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-6.fc42.aarch64 openssl-libs-3.2.2-8.fc42.aarch64 p11-kit-0.25.5-4.fc42.aarch64 p11-kit-trust-0.25.5-4.fc42.aarch64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.7.0-3.fc42.aarch64 pam-libs-1.7.0-3.fc42.aarch64 patch-2.7.6-25.fc42.aarch64 pcre2-10.44-1.fc42.1.aarch64 pcre2-syntax-10.44-1.fc42.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.aarch64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.aarch64 popt-1.19-7.fc42.aarch64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.3-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.1-4.fc42.noarch readline-8.2-11.fc42.aarch64 redhat-rpm-config-300-1.no_annobin.0.fc42.noarch rpm-4.20.0-1.fc42.aarch64 rpm-build-4.20.0-1.fc42.aarch64 rpm-build-libs-4.20.0-1.fc42.aarch64 rpm-libs-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc42.aarch64 setup-2.15.0-5.fc41.noarch shadow-utils-4.17.0~rc1-1.fc42.aarch64 sqlite-libs-3.47.2-1.fc42.aarch64 systemd-libs-257.1-1.fc42.aarch64 tar-1.35-4.fc41.aarch64 unzip-6.0-65.fc42.aarch64 util-linux-2.40.2-8.fc42.aarch64 util-linux-core-2.40.2-8.fc42.aarch64 which-2.21-42.fc41.aarch64 xxhash-libs-0.8.2-4.fc42.aarch64 xz-5.6.3-2.fc42.aarch64 xz-libs-5.6.3-2.fc42.aarch64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-42.fc42.aarch64 zlib-ng-compat-2.2.2-1.fc42.aarch64 zstd-1.5.6-2.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721433600 Wrote: /builddir/build/SRPMS/staden-io_lib-1.14.8-4.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1734878024.029913/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-0pym71f8/staden-io_lib/staden-io_lib.spec) Config(child) 0 minutes 26 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/staden-io_lib-1.14.8-4.fc42.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734878024.029913/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1734878024.029913/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1734878024.029913/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 dnf5-5.2.8.1-2.fc42.aarch64 dnf5-plugins-5.2.8.1-2.fc42.aarch64 Finish: chroot init Start: build phase for staden-io_lib-1.14.8-4.fc42.src.rpm Start: build setup for staden-io_lib-1.14.8-4.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721433600 Wrote: /builddir/build/SRPMS/staden-io_lib-1.14.8-4.fc42.src.rpm Updating and loading repositories: Copr repository 100% | 96.1 KiB/s | 1.5 KiB | 00m00s Additional repo https_fedorapeople_org 100% | 24.6 KiB/s | 1.5 KiB | 00m00s fedora 100% | 72.5 KiB/s | 11.7 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: gcc aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 97.8 MiB libcurl-devel aarch64 8.11.1-2.fc42 copr_base 1.3 MiB make aarch64 1:4.4.1-9.fc42 copr_base 1.8 MiB zlib-ng-compat-devel aarch64 2.2.2-1.fc42 fedora 106.8 KiB Installing dependencies: annobin-docs noarch 12.79-1.fc42 copr_base 98.6 KiB annobin-plugin-gcc aarch64 12.79-1.fc42 copr_base 997.2 KiB brotli aarch64 1.1.0-5.fc42 copr_base 66.4 KiB brotli-devel aarch64 1.1.0-5.fc42 copr_base 65.6 KiB cmake-filesystem aarch64 3.31.2-1.fc42 copr_base 0.0 B cpp aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 35.3 MiB gcc-plugin-annobin aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 67.5 KiB glibc-devel aarch64 2.40.9000-24.fc42 copr_base 2.2 MiB kernel-headers aarch64 6.13.0-0.rc3.29.fc42 fedora 6.4 MiB keyutils-libs-devel aarch64 1.6.3-4.fc42 copr_base 48.2 KiB krb5-devel aarch64 1.21.3-3.fc42 copr_base 705.9 KiB libasan aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 1.5 MiB libatomic aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 66.1 KiB libcom_err-devel aarch64 1.47.1-6.fc42 fedora 16.7 KiB libidn2-devel aarch64 2.3.7-2.fc42 copr_base 252.1 KiB libkadm5 aarch64 1.21.3-3.fc42 copr_base 260.8 KiB libmpc aarch64 1.3.1-6.fc42 copr_base 149.9 KiB libnghttp2-devel aarch64 1.64.0-1.fc42 fedora 295.4 KiB libpsl-devel aarch64 0.21.5-4.fc42 copr_base 110.3 KiB libselinux-devel aarch64 3.8-0.rc3.1.fc42 fedora 126.8 KiB libsepol-devel aarch64 3.8-0.rc3.1.fc42 fedora 120.8 KiB libssh-devel aarch64 0.11.1-1.fc42 copr_base 178.0 KiB libubsan aarch64 15.0.0-0.2.fc42 https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch 460.6 KiB libverto-devel aarch64 0.3.2-9.fc41 fedora 25.7 KiB libxcrypt-devel aarch64 4.4.36-12.fc42 fedora 30.5 KiB openssl-devel aarch64 1:3.2.2-8.fc42 copr_base 4.3 MiB pcre2-devel aarch64 10.44-1.fc42.1 copr_base 2.0 MiB pcre2-utf16 aarch64 10.44-1.fc42.1 copr_base 578.3 KiB pcre2-utf32 aarch64 10.44-1.fc42.1 copr_base 514.3 KiB publicsuffix-list noarch 20240107-4.fc41 fedora 318.0 KiB Transaction Summary: Installing: 34 packages Total size of inbound packages is 56 MiB. Need to download 56 MiB. After this operation, 158 MiB extra will be used (install 158 MiB, remove 0 B). [ 1/34] zlib-ng-compat-devel-0:2.2.2-1. 100% | 2.7 MiB/s | 38.1 KiB | 00m00s [ 2/34] libcurl-devel-0:8.11.1-2.fc42.a 100% | 42.4 MiB/s | 781.7 KiB | 00m00s [ 3/34] make-1:4.4.1-9.fc42.aarch64 100% | 112.2 MiB/s | 574.2 KiB | 00m00s [ 4/34] libnghttp2-devel-0:1.64.0-1.fc4 100% | 27.2 MiB/s | 55.7 KiB | 00m00s [ 5/34] cmake-filesystem-0:3.31.2-1.fc4 100% | 8.8 MiB/s | 18.1 KiB | 00m00s [ 6/34] glibc-devel-0:2.40.9000-24.fc42 100% | 109.7 MiB/s | 561.6 KiB | 00m00s [ 7/34] kernel-headers-0:6.13.0-0.rc3.2 100% | 230.3 MiB/s | 1.6 MiB | 00m00s [ 8/34] libxcrypt-devel-0:4.4.36-12.fc4 100% | 27.1 MiB/s | 27.8 KiB | 00m00s [ 9/34] libmpc-0:1.3.1-6.fc42.aarch64 100% | 22.8 MiB/s | 70.0 KiB | 00m00s [10/34] libasan-0:15.0.0-0.2.fc42.aarch 100% | 3.1 MiB/s | 456.3 KiB | 00m00s [11/34] libatomic-0:15.0.0-0.2.fc42.aar 100% | 969.3 KiB/s | 17.4 KiB | 00m00s [12/34] libubsan-0:15.0.0-0.2.fc42.aarc 100% | 10.2 MiB/s | 188.3 KiB | 00m00s [13/34] brotli-devel-0:1.1.0-5.fc42.aar 100% | 16.8 MiB/s | 34.5 KiB | 00m00s [14/34] brotli-0:1.1.0-5.fc42.aarch64 100% | 9.3 MiB/s | 19.0 KiB | 00m00s [15/34] krb5-devel-0:1.21.3-3.fc42.aarc 100% | 65.8 MiB/s | 134.7 KiB | 00m00s [16/34] libcom_err-devel-0:1.47.1-6.fc4 100% | 8.0 MiB/s | 16.3 KiB | 00m00s [17/34] libverto-devel-0:0.3.2-9.fc41.a 100% | 14.0 MiB/s | 14.3 KiB | 00m00s [18/34] libidn2-devel-0:2.3.7-2.fc42.aa 100% | 31.0 MiB/s | 63.6 KiB | 00m00s [19/34] libpsl-devel-0:0.21.5-4.fc42.aa 100% | 16.5 MiB/s | 33.7 KiB | 00m00s [20/34] publicsuffix-list-0:20240107-4. 100% | 42.7 MiB/s | 87.5 KiB | 00m00s [21/34] libssh-devel-0:0.11.1-1.fc42.aa 100% | 20.9 MiB/s | 42.7 KiB | 00m00s [22/34] openssl-devel-1:3.2.2-8.fc42.aa 100% | 76.7 MiB/s | 2.7 MiB | 00m00s [23/34] keyutils-libs-devel-0:1.6.3-4.f 100% | 26.7 MiB/s | 54.6 KiB | 00m00s [24/34] libkadm5-0:1.21.3-3.fc42.aarch6 100% | 36.7 MiB/s | 75.1 KiB | 00m00s [25/34] libselinux-devel-0:3.8-0.rc3.1. 100% | 74.1 MiB/s | 151.7 KiB | 00m00s [26/34] libsepol-devel-0:3.8-0.rc3.1.fc 100% | 23.7 MiB/s | 48.4 KiB | 00m00s [27/34] cpp-0:15.0.0-0.2.fc42.aarch64 100% | 39.0 MiB/s | 11.4 MiB | 00m00s [28/34] pcre2-devel-0:10.44-1.fc42.1.aa 100% | 26.6 MiB/s | 489.9 KiB | 00m00s [29/34] pcre2-utf16-0:10.44-1.fc42.1.aa 100% | 50.2 MiB/s | 205.5 KiB | 00m00s [30/34] pcre2-utf32-0:10.44-1.fc42.1.aa 100% | 47.2 MiB/s | 193.2 KiB | 00m00s [31/34] annobin-plugin-gcc-0:12.79-1.fc 100% | 136.2 MiB/s | 976.3 KiB | 00m00s [32/34] annobin-docs-0:12.79-1.fc42.noa 100% | 30.3 MiB/s | 93.2 KiB | 00m00s [33/34] gcc-plugin-annobin-0:15.0.0-0.2 100% | 1.7 MiB/s | 30.8 KiB | 00m00s [34/34] gcc-0:15.0.0-0.2.fc42.aarch64 100% | 66.2 MiB/s | 35.1 MiB | 00m01s -------------------------------------------------------------------------------- [34/34] Total 100% | 7.1 MiB/s | 56.2 MiB | 00m08s Running transaction [ 1/36] Verify package files 100% | 170.0 B/s | 34.0 B | 00m00s [ 2/36] Prepare transaction 100% | 492.0 B/s | 34.0 B | 00m00s [ 3/36] Installing libmpc-0:1.3.1-6.fc4 100% | 74.0 MiB/s | 151.5 KiB | 00m00s [ 4/36] Installing cmake-filesystem-0:3 100% | 3.7 MiB/s | 7.6 KiB | 00m00s [ 5/36] Installing zlib-ng-compat-devel 100% | 105.8 MiB/s | 108.3 KiB | 00m00s [ 6/36] Installing libssh-devel-0:0.11. 100% | 176.3 MiB/s | 180.5 KiB | 00m00s [ 7/36] Installing cpp-0:15.0.0-0.2.fc4 100% | 304.4 MiB/s | 35.3 MiB | 00m00s [ 8/36] Installing annobin-docs-0:12.79 100% | 97.4 MiB/s | 99.7 KiB | 00m00s [ 9/36] Installing pcre2-utf32-0:10.44- 100% | 251.5 MiB/s | 515.1 KiB | 00m00s [10/36] Installing pcre2-utf16-0:10.44- 100% | 282.8 MiB/s | 579.1 KiB | 00m00s [11/36] Installing pcre2-devel-0:10.44- 100% | 199.5 MiB/s | 2.0 MiB | 00m00s [12/36] Installing libsepol-devel-0:3.8 100% | 41.8 MiB/s | 128.3 KiB | 00m00s [13/36] Installing libselinux-devel-0:3 100% | 26.3 MiB/s | 161.6 KiB | 00m00s [14/36] Installing libkadm5-0:1.21.3-3. 100% | 128.3 MiB/s | 262.8 KiB | 00m00s [15/36] Installing keyutils-libs-devel- 100% | 6.7 MiB/s | 55.2 KiB | 00m00s [16/36] Installing openssl-devel-1:3.2. 100% | 46.7 MiB/s | 5.2 MiB | 00m00s [17/36] Installing publicsuffix-list-0: 100% | 311.6 MiB/s | 319.1 KiB | 00m00s [18/36] Installing libpsl-devel-0:0.21. 100% | 110.9 MiB/s | 113.6 KiB | 00m00s [19/36] Installing libidn2-devel-0:2.3. 100% | 84.7 MiB/s | 260.1 KiB | 00m00s [20/36] Installing libverto-devel-0:0.3 100% | 0.0 B/s | 26.4 KiB | 00m00s [21/36] Installing libcom_err-devel-0:1 100% | 17.8 MiB/s | 18.3 KiB | 00m00s [22/36] Installing krb5-devel-0:1.21.3- 100% | 174.6 MiB/s | 715.2 KiB | 00m00s [23/36] Installing brotli-0:1.1.0-5.fc4 100% | 65.5 MiB/s | 67.0 KiB | 00m00s [24/36] Installing brotli-devel-0:1.1.0 100% | 66.4 MiB/s | 68.0 KiB | 00m00s [25/36] Installing libubsan-0:15.0.0-0. 100% | 225.3 MiB/s | 461.4 KiB | 00m00s [26/36] Installing libatomic-0:15.0.0-0 100% | 0.0 B/s | 66.9 KiB | 00m00s [27/36] Installing libasan-0:15.0.0-0.2 100% | 216.1 MiB/s | 1.5 MiB | 00m00s [28/36] Installing kernel-headers-0:6.1 100% | 145.1 MiB/s | 6.5 MiB | 00m00s [29/36] Installing libxcrypt-devel-0:4. 100% | 16.0 MiB/s | 32.9 KiB | 00m00s [30/36] Installing glibc-devel-0:2.40.9 100% | 120.4 MiB/s | 2.3 MiB | 00m00s [31/36] Installing libnghttp2-devel-0:1 100% | 289.5 MiB/s | 296.5 KiB | 00m00s [32/36] Installing make-1:4.4.1-9.fc42. 100% | 205.1 MiB/s | 1.8 MiB | 00m00s [33/36] Installing gcc-0:15.0.0-0.2.fc4 100% | 336.2 MiB/s | 97.8 MiB | 00m00s [34/36] Installing gcc-plugin-annobin-0 100% | 4.5 MiB/s | 69.0 KiB | 00m00s [35/36] Installing annobin-plugin-gcc-0 100% | 48.8 MiB/s | 998.9 KiB | 00m00s [36/36] Installing libcurl-devel-0:8.11 100% | 8.8 MiB/s | 1.4 MiB | 00m00s Warning: skipped OpenPGP checks for 25 packages from repositories: copr_base, https_fedorapeople_org_dmalcolm_gcc_gcc_15_mass_prebuild_basearch Complete! Finish: build setup for staden-io_lib-1.14.8-4.fc42.src.rpm Start: rpmbuild staden-io_lib-1.14.8-4.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721433600 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.3Xr0EI + umask 022 + cd /builddir/build/BUILD/staden-io_lib-1.14.8-build + test -d /builddir/build/BUILD/staden-io_lib-1.14.8-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/staden-io_lib-1.14.8-build + /usr/bin/rm -rf /builddir/build/BUILD/staden-io_lib-1.14.8-build + /usr/bin/mkdir -p /builddir/build/BUILD/staden-io_lib-1.14.8-build + /usr/bin/mkdir -p /builddir/build/BUILD/staden-io_lib-1.14.8-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Q1jHEf + umask 022 + cd /builddir/build/BUILD/staden-io_lib-1.14.8-build + cd /builddir/build/BUILD/staden-io_lib-1.14.8-build + rm -rf io_lib-1.14.8 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/io_lib-1.14.8.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd io_lib-1.14.8 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/staden-libs-config.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + mv io_lib-config.in staden-io_lib-config.in + sed -i s/libread/libstaden-read/g io_lib/Makefile.in progs/Makefile.in + sed -i s/lread/lstaden-read/ staden-io_lib-config.in + sed -i s/io_lib-config/staden-io_lib-config/g configure Makefile.in + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.rQlD4z + umask 022 + cd /builddir/build/BUILD/staden-io_lib-1.14.8-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd io_lib-1.14.8 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2024-12-22 14:34:24.922609975 +0000 +++ ./configure 2024-12-22 14:34:24.946609783 +0000 @@ -1759,7 +1759,7 @@ #ifdef __cplusplus extern "C" #endif -char $2 (); +__attribute__ ((used)) char $2 (); /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2024-12-22 14:34:24.946609783 +0000 +++ ./configure 2024-12-22 14:34:24.963609647 +0000 @@ -15110,7 +15110,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' nm_file_list_spec='`$ECHO "$nm_file_list_spec" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./config.guess ++ basename ./config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess '/usr/lib/rpm/redhat/config.guess' -> './config.guess' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./config.sub ++ basename ./config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub '/usr/lib/rpm/redhat/config.sub' -> './config.sub' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh ++ grep -q runstatedir=DIR ./configure + ./configure --build=aarch64-redhat-linux --host=aarch64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-static checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for aarch64-redhat-linux-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking build system type... aarch64-redhat-linux-gnu checking host system type... aarch64-redhat-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert aarch64-redhat-linux-gnu file names to aarch64-redhat-linux-gnu format... func_convert_file_noop checking how to convert aarch64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for aarch64-redhat-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for aarch64-redhat-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for aarch64-redhat-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for aarch64-redhat-linux-strip... no checking for strip... strip checking for aarch64-redhat-linux-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for aarch64-redhat-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for C compiler warning flags... -Wall checking for gawk... (cached) gawk checking for curl-config... /usr/bin/curl-config checking for the version of libcurl... 8.11.1 checking whether libcurl just needs -lcurl... yes checking whether libcurl is usable... yes checking for curl_free... yes checking for inflateEnd in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for library containing gethostbyname... none required checking for library containing socket... none required checking for BZ2_bzBuffToBuffCompress in -lbz2... no checking for lzma_easy_buffer_encode in -llzma... no checking whether byte ordering is bigendian... no checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for unistd.h... (cached) yes checking for zlib.h... (cached) yes checking stdio_ext.h usability... yes checking stdio_ext.h presence... yes checking for stdio_ext.h... yes checking whether byte ordering is bigendian... (cached) no checking size of short... 2 checking size of int... 4 checking size of long... 8 checking for inline... inline checking for mode_t... yes checking for fileno... yes checking for fstat... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... yes checking for getpagesize... yes checking for working mmap... yes checking for library containing pthread_join... none required checking for library containing cos... -lm checking for strdup... yes checking for fsync... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating io_lib/Makefile config.status: creating progs/Makefile config.status: creating tests/Makefile config.status: creating staden-io_lib-config config.status: creating io_lib/os.h config.status: creating io_lib_config.h config.status: executing depfiles commands config.status: executing libtool commands + sed -i 's+\(search_path_spec=\"\)+\1/lib64 /usr/lib64 +' libtool + /usr/bin/make -O -j4 V=1 VERBOSE=1 /usr/bin/make all-recursive Making all in io_lib make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo './'`scf_extras.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c scf_extras.c -fPIC -DPIC -o .libs/libstaden_read_la-scf_extras.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo './'`Read.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Read.c -fPIC -DPIC -o .libs/libstaden_read_la-Read.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo './'`translate.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c translate.c -fPIC -DPIC -o .libs/libstaden_read_la-translate.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo './'`ztr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ztr.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo './'`fpoint.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fpoint.c -fPIC -DPIC -o .libs/libstaden_read_la-fpoint.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo './'`ztr_translate.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ztr_translate.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr_translate.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' ztr_translate.c: In function 'ztr_encode_samples_4': ztr_translate.c:99:20: warning: '%s' directive writing up to 255 bytes into a region of size 12 [-Wformat-overflow=] 99 | *mdbytes = sprintf(*mdata, "OFFS%c%s", 0, buf) + 1; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from ztr_translate.c:73: In function 'sprintf', inlined from 'ztr_encode_samples_4' at ztr_translate.c:99:13: /usr/include/bits/stdio2.h:30:10: note: '__sprintf_chk' output between 6 and 261 bytes into a destination of size 17 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo './'`seqIOALF.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c seqIOALF.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOALF.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo './'`compression.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c compression.c -fPIC -DPIC -o .libs/libstaden_read_la-compression.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo './'`seqIOABI.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c seqIOABI.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOABI.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-seqIOPlain.lo `test -f 'seqIOPlain.c' || echo './'`seqIOPlain.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c seqIOPlain.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOPlain.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo './'`deflate_interlaced.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c deflate_interlaced.c -fPIC -DPIC -o .libs/libstaden_read_la-deflate_interlaced.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-misc_scf.lo `test -f 'misc_scf.c' || echo './'`misc_scf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c misc_scf.c -fPIC -DPIC -o .libs/libstaden_read_la-misc_scf.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-read_scf.lo `test -f 'read_scf.c' || echo './'`read_scf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c read_scf.c -fPIC -DPIC -o .libs/libstaden_read_la-read_scf.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-sff.lo `test -f 'sff.c' || echo './'`sff.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sff.c -fPIC -DPIC -o .libs/libstaden_read_la-sff.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-write_scf.lo `test -f 'write_scf.c' || echo './'`write_scf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c write_scf.c -fPIC -DPIC -o .libs/libstaden_read_la-write_scf.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-expFileIO.lo `test -f 'expFileIO.c' || echo './'`expFileIO.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c expFileIO.c -fPIC -DPIC -o .libs/libstaden_read_la-expFileIO.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-array.lo `test -f 'array.c' || echo './'`array.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c array.c -fPIC -DPIC -o .libs/libstaden_read_la-array.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-error.lo `test -f 'error.c' || echo './'`error.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c error.c -fPIC -DPIC -o .libs/libstaden_read_la-error.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-find.lo `test -f 'find.c' || echo './'`find.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c find.c -fPIC -DPIC -o .libs/libstaden_read_la-find.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-files.lo `test -f 'files.c' || echo './'`files.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c files.c -fPIC -DPIC -o .libs/libstaden_read_la-files.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-compress.lo `test -f 'compress.c' || echo './'`compress.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c compress.c -fPIC -DPIC -o .libs/libstaden_read_la-compress.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-mach-io.lo `test -f 'mach-io.c' || echo './'`mach-io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mach-io.c -fPIC -DPIC -o .libs/libstaden_read_la-mach-io.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-read_alloc.lo `test -f 'read_alloc.c' || echo './'`read_alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c read_alloc.c -fPIC -DPIC -o .libs/libstaden_read_la-read_alloc.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-strings.lo `test -f 'strings.c' || echo './'`strings.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c strings.c -fPIC -DPIC -o .libs/libstaden_read_la-strings.o strings.c: In function 'c2fstr': strings.c:117:5: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-truncation] 117 | strncpy(f,c,i); | ^ In file included from strings.c:87: strings.c:116:18: note: length computed here 116 | i = MIN((int)strlen(c),max_f); | ^~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-xalloc.lo `test -f 'xalloc.c' || echo './'`xalloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c xalloc.c -fPIC -DPIC -o .libs/libstaden_read_la-xalloc.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-traceType.lo `test -f 'traceType.c' || echo './'`traceType.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c traceType.c -fPIC -DPIC -o .libs/libstaden_read_la-traceType.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-vlen.lo `test -f 'vlen.c' || echo './'`vlen.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c vlen.c -fPIC -DPIC -o .libs/libstaden_read_la-vlen.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-srf.lo `test -f 'srf.c' || echo './'`srf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c srf.c -fPIC -DPIC -o .libs/libstaden_read_la-srf.o srf.c: In function 'srf_write_cont_hdr': srf.c:334:24: warning: the comparison will always evaluate as 'true' for the address of 'version' will never be NULL [-Waddress] 334 | + (ch->version ? strlen(ch->version) : 0) + 1 | ^ In file included from srf.c:47: ../io_lib/srf.h:58:10: note: 'version' declared here 58 | char version[256]; | ^~~~~~~ srf.c:335:28: warning: the comparison will always evaluate as 'true' for the address of 'base_caller' will never be NULL [-Waddress] 335 | + (ch->base_caller ? strlen(ch->base_caller) : 0) + 1 | ^ ../io_lib/srf.h:60:10: note: 'base_caller' declared here 60 | char base_caller[256]; | ^~~~~~~~~~~ srf.c:336:36: warning: the comparison will always evaluate as 'true' for the address of 'base_caller_version' will never be NULL [-Waddress] 336 | + (ch->base_caller_version ? strlen(ch->base_caller_version) : 0) + 1; | ^ ../io_lib/srf.h:61:10: note: 'base_caller_version' declared here 61 | char base_caller_version[256]; | ^~~~~~~~~~~~~~~~~~~ srf.c: In function 'srf_write_trace_hdr': srf.c:500:26: warning: the comparison will always evaluate as 'true' for the address of 'id_prefix' will never be NULL [-Waddress] 500 | + (th->id_prefix ? strlen(th->id_prefix) : 0) + 1 | ^ ../io_lib/srf.h:68:10: note: 'id_prefix' declared here 68 | char id_prefix[256]; | ^~~~~~~~~ srf.c: In function 'srf_index_write': srf.c:1010:27: warning: the comparison will always evaluate as 'true' for the address of 'ch_file' will never be NULL [-Waddress] 1010 | 1 + (idx->ch_file ? strlen(idx->ch_file) : 0) + | ^ ../io_lib/srf.h:118:10: note: 'ch_file' declared here 118 | char ch_file[PATH_MAX+1]; | ^~~~~~~ srf.c:1011:27: warning: the comparison will always evaluate as 'true' for the address of 'th_file' will never be NULL [-Waddress] 1011 | 1 + (idx->th_file ? strlen(idx->th_file) : 0); | ^ ../io_lib/srf.h:119:10: note: 'th_file' declared here 119 | char th_file[PATH_MAX+1]; | ^~~~~~~ srf.c:1036:9: warning: the comparison will always evaluate as 'true' for the address of 'th_file' will never be NULL [-Waddress] 1036 | if (idx->th_file) | ^~~ ../io_lib/srf.h:119:10: note: 'th_file' declared here 119 | char th_file[PATH_MAX+1]; | ^~~~~~~ srf.c:1040:9: warning: the comparison will always evaluate as 'true' for the address of 'ch_file' will never be NULL [-Waddress] 1040 | if (idx->ch_file) | ^~~ ../io_lib/srf.h:118:10: note: 'ch_file' declared here 118 | char ch_file[PATH_MAX+1]; | ^~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-open_trace_file.lo `test -f 'open_trace_file.c' || echo './'`open_trace_file.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c open_trace_file.c -fPIC -DPIC -o .libs/libstaden_read_la-open_trace_file.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-jenkins_lookup3.lo `test -f 'jenkins_lookup3.c' || echo './'`jenkins_lookup3.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c jenkins_lookup3.c -fPIC -DPIC -o .libs/libstaden_read_la-jenkins_lookup3.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-pooled_alloc.lo `test -f 'pooled_alloc.c' || echo './'`pooled_alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pooled_alloc.c -fPIC -DPIC -o .libs/libstaden_read_la-pooled_alloc.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-mFILE.lo `test -f 'mFILE.c' || echo './'`mFILE.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mFILE.c -fPIC -DPIC -o .libs/libstaden_read_la-mFILE.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-hash_table.lo `test -f 'hash_table.c' || echo './'`hash_table.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c hash_table.c -fPIC -DPIC -o .libs/libstaden_read_la-hash_table.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-sam_header.lo `test -f 'sam_header.c' || echo './'`sam_header.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sam_header.c -fPIC -DPIC -o .libs/libstaden_read_la-sam_header.o In file included from sam_header.c:43: sam_header.c: In function 'sam_hdr_vadd': sam_header.c:451:16: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 451 | assert(p->next = t); | ^ make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-rANS_static.lo `test -f 'rANS_static.c' || echo './'`rANS_static.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rANS_static.c -fPIC -DPIC -o .libs/libstaden_read_la-rANS_static.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-bam.lo `test -f 'bam.c' || echo './'`bam.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bam.c -fPIC -DPIC -o .libs/libstaden_read_la-bam.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-cram_codecs.lo `test -f 'cram_codecs.c' || echo './'`cram_codecs.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cram_codecs.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_codecs.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-cram_stats.lo `test -f 'cram_stats.c' || echo './'`cram_stats.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cram_stats.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_stats.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-cram_index.lo `test -f 'cram_index.c' || echo './'`cram_index.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cram_index.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_index.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-zfio.lo `test -f 'zfio.c' || echo './'`zfio.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c zfio.c -fPIC -DPIC -o .libs/libstaden_read_la-zfio.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-cram_encode.lo `test -f 'cram_encode.c' || echo './'`cram_encode.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cram_encode.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_encode.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-string_alloc.lo `test -f 'string_alloc.c' || echo './'`string_alloc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c string_alloc.c -fPIC -DPIC -o .libs/libstaden_read_la-string_alloc.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-dstring.lo `test -f 'dstring.c' || echo './'`dstring.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dstring.c -fPIC -DPIC -o .libs/libstaden_read_la-dstring.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-crc32.lo `test -f 'crc32.c' || echo './'`crc32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c crc32.c -fPIC -DPIC -o .libs/libstaden_read_la-crc32.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-md5.lo `test -f 'md5.c' || echo './'`md5.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c md5.c -fPIC -DPIC -o .libs/libstaden_read_la-md5.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-scram.lo `test -f 'scram.c' || echo './'`scram.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c scram.c -fPIC -DPIC -o .libs/libstaden_read_la-scram.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-binning.lo `test -f 'binning.c' || echo './'`binning.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c binning.c -fPIC -DPIC -o .libs/libstaden_read_la-binning.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-thread_pool.lo `test -f 'thread_pool.c' || echo './'`thread_pool.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c thread_pool.c -fPIC -DPIC -o .libs/libstaden_read_la-thread_pool.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-cram_bambam.lo `test -f 'cram_bambam.c' || echo './'`cram_bambam.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cram_bambam.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_bambam.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-cram_decode.lo `test -f 'cram_decode.c' || echo './'`cram_decode.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cram_decode.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_decode.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' cram_decode.c: In function 'cram_to_bam': cram_decode.c:2980:30: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2980 | *aux++ = 'R'; *aux++ = 'G'; *aux++ = 'Z'; | ~~~~~~~^~~~~ In file included from ../io_lib/cram_structs.h:67, from ../io_lib/cram.h:57, from cram_decode.c:56: ../io_lib/bam.h:96:19: note: at offset 1 into destination object 'data' of size 1 96 | unsigned char data; /* unknown size */ | ^~~~ ../io_lib/bam.h:96:19: note: at offset 1 into destination object 'data' of size 1 cram_decode.c:2980:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2980 | *aux++ = 'R'; *aux++ = 'G'; *aux++ = 'Z'; | ~~~~~~~^~~~~ ../io_lib/bam.h:96:19: note: at offset [2, 3] into destination object 'data' of size 1 96 | unsigned char data; /* unknown size */ | ^~~~ ../io_lib/bam.h:96:19: note: at offset [2, 3] into destination object 'data' of size 1 make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o libstaden_read_la-cram_io.lo `test -f 'cram_io.c' || echo './'`cram_io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cram_io.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_io.o make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' cram_io.c: In function 'cram_populate_ref': cram_io.c:2863:34: warning: '.tmp_' directive writing 5 bytes into a region of size between 1 and 4096 [-Wformat-overflow=] 2863 | sprintf(path_tmp, "%s.tmp_%d", path, /*getpid(),*/ i); | ^~~~~ cram_io.c:2863:31: note: directive argument in the range [0, 2147483647] 2863 | sprintf(path_tmp, "%s.tmp_%d", path, /*getpid(),*/ i); | ^~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from cram_io.c:56: In function 'sprintf', inlined from 'cram_populate_ref' at cram_io.c:2863:6: /usr/include/bits/stdio2.h:30:10: note: '__sprintf_chk' output between 7 and 4111 bytes into a destination of size 4096 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ cram_io.c: In function 'cram_write_SAM_hdr': cram_io.c:4256:13: warning: 'strncpy' specified bound 4096 equals destination size [-Wstringop-truncation] 4256 | strncpy(out, in, PATH_MAX); | ^ cram_io.c:4248:9: warning: 'strncpy' specified bound 4096 equals destination size [-Wstringop-truncation] 4248 | strncpy(out, in, PATH_MAX); | ^ cram_io.c: In function 'cram_open': cram_io.c:4813:9: warning: 'strncpy' specified bound 20 equals destination size [-Wstringop-truncation] 4813 | strncpy(def.file_id, filename, 20); | ^ cram_io.c: In function 'cram_openw_by_callbacks': cram_io.c:5039:13: warning: 'strncpy' specified bound 20 equals destination size [-Wstringop-truncation] 5039 | strncpy(def.file_id, filename, 20); | ^ make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -version-info 11:6:0 -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o libstaden-read.la -rpath /usr/lib64 libstaden_read_la-Read.lo libstaden_read_la-scf_extras.lo libstaden_read_la-translate.lo libstaden_read_la-compression.lo libstaden_read_la-ztr.lo libstaden_read_la-ztr_translate.lo libstaden_read_la-deflate_interlaced.lo libstaden_read_la-fpoint.lo libstaden_read_la-seqIOABI.lo libstaden_read_la-seqIOALF.lo libstaden_read_la-expFileIO.lo libstaden_read_la-seqIOPlain.lo libstaden_read_la-misc_scf.lo libstaden_read_la-read_scf.lo libstaden_read_la-write_scf.lo libstaden_read_la-sff.lo libstaden_read_la-srf.lo libstaden_read_la-array.lo libstaden_read_la-compress.lo libstaden_read_la-error.lo libstaden_read_la-files.lo libstaden_read_la-find.lo libstaden_read_la-mach-io.lo libstaden_read_la-open_trace_file.lo libstaden_read_la-read_alloc.lo libstaden_read_la-strings.lo libstaden_read_la-traceType.lo libstaden_read_la-xalloc.lo libstaden_read_la-vlen.lo libstaden_read_la-hash_table.lo libstaden_read_la-jenkins_lookup3.lo libstaden_read_la-mFILE.lo libstaden_read_la-pooled_alloc.lo libstaden_read_la-bam.lo libstaden_read_la-sam_header.lo libstaden_read_la-rANS_static.lo libstaden_read_la-cram_codecs.lo libstaden_read_la-cram_encode.lo libstaden_read_la-cram_decode.lo libstaden_read_la-cram_stats.lo libstaden_read_la-cram_io.lo libstaden_read_la-cram_index.lo libstaden_read_la-zfio.lo libstaden_read_la-dstring.lo libstaden_read_la-string_alloc.lo libstaden_read_la-md5.lo libstaden_read_la-crc32.lo libstaden_read_la-scram.lo libstaden_read_la-thread_pool.lo libstaden_read_la-binning.lo libstaden_read_la-cram_bambam.lo -lz -lcurl -lm libtool: link: gcc -shared -fPIC -DPIC .libs/libstaden_read_la-Read.o .libs/libstaden_read_la-scf_extras.o .libs/libstaden_read_la-translate.o .libs/libstaden_read_la-compression.o .libs/libstaden_read_la-ztr.o .libs/libstaden_read_la-ztr_translate.o .libs/libstaden_read_la-deflate_interlaced.o .libs/libstaden_read_la-fpoint.o .libs/libstaden_read_la-seqIOABI.o .libs/libstaden_read_la-seqIOALF.o .libs/libstaden_read_la-expFileIO.o .libs/libstaden_read_la-seqIOPlain.o .libs/libstaden_read_la-misc_scf.o .libs/libstaden_read_la-read_scf.o .libs/libstaden_read_la-write_scf.o .libs/libstaden_read_la-sff.o .libs/libstaden_read_la-srf.o .libs/libstaden_read_la-array.o .libs/libstaden_read_la-compress.o .libs/libstaden_read_la-error.o .libs/libstaden_read_la-files.o .libs/libstaden_read_la-find.o .libs/libstaden_read_la-mach-io.o .libs/libstaden_read_la-open_trace_file.o .libs/libstaden_read_la-read_alloc.o .libs/libstaden_read_la-strings.o .libs/libstaden_read_la-traceType.o .libs/libstaden_read_la-xalloc.o .libs/libstaden_read_la-vlen.o .libs/libstaden_read_la-hash_table.o .libs/libstaden_read_la-jenkins_lookup3.o .libs/libstaden_read_la-mFILE.o .libs/libstaden_read_la-pooled_alloc.o .libs/libstaden_read_la-bam.o .libs/libstaden_read_la-sam_header.o .libs/libstaden_read_la-rANS_static.o .libs/libstaden_read_la-cram_codecs.o .libs/libstaden_read_la-cram_encode.o .libs/libstaden_read_la-cram_decode.o .libs/libstaden_read_la-cram_stats.o .libs/libstaden_read_la-cram_io.o .libs/libstaden_read_la-cram_index.o .libs/libstaden_read_la-zfio.o .libs/libstaden_read_la-dstring.o .libs/libstaden_read_la-string_alloc.o .libs/libstaden_read_la-md5.o .libs/libstaden_read_la-crc32.o .libs/libstaden_read_la-scram.o .libs/libstaden_read_la-thread_pool.o .libs/libstaden_read_la-binning.o .libs/libstaden_read_la-cram_bambam.o -lz -lcurl -lm -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -flto=auto -mbranch-protection=standard -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -Wl,--build-id=sha1 -Wl,-soname -Wl,libstaden-read.so.11 -o .libs/libstaden-read.so.11.0.6 libtool: link: (cd ".libs" && rm -f "libstaden-read.so.11" && ln -s "libstaden-read.so.11.0.6" "libstaden-read.so.11") libtool: link: (cd ".libs" && rm -f "libstaden-read.so" && ln -s "libstaden-read.so.11.0.6" "libstaden-read.so") libtool: link: ( cd ".libs" && rm -f "libstaden-read.la" && ln -s "../libstaden-read.la" "libstaden-read.la" ) make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' Making all in progs ../io_lib/rANS_static.h:6:16: warning: type of 'rans_uncompress' does not match original declaration [-Wlto-type-mismatch] 6 | unsigned char *rans_uncompress(unsigned char *in, unsigned int in_size, | ^ rANS_static.c:1256:16: note: type mismatch in parameter 4 1256 | unsigned char *rans_uncompress(unsigned char *in, unsigned int in_size, | ^ rANS_static.c:1256:16: note: type 'void' should match type 'int' rANS_static.c:1256:16: note: 'rans_uncompress' was previously declared here cram_decode.c: In function 'cram_to_bam': cram_decode.c:2980:30: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2980 | *aux++ = 'R'; *aux++ = 'G'; *aux++ = 'Z'; | ^ ../io_lib/bam.h:96:19: note: at offset 1 into destination object 'data' of size 1 96 | unsigned char data; /* unknown size */ | ^ ../io_lib/bam.h:96:19: note: at offset 1 into destination object 'data' of size 1 cram_decode.c:2980:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2980 | *aux++ = 'R'; *aux++ = 'G'; *aux++ = 'Z'; | ^ ../io_lib/bam.h:96:19: note: at offset [2, 3] into destination object 'data' of size 1 96 | unsigned char data; /* unknown size */ | ^ ../io_lib/bam.h:96:19: note: at offset [2, 3] into destination object 'data' of size 1 make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o extract_seq.o extract_seq.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o extract_qual.o extract_qual.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o makeSCF.o makeSCF.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o extract_fastq.o extract_fastq.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o index_tar.o index_tar.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o scf_info.o scf_info.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o scf_update.o scf_update.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o scf_dump.o scf_dump.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o convert_trace.o convert_trace.c convert_trace.c: In function ‘main’: convert_trace.c:811:37: warning: ‘%s’ directive writing up to 8191 bytes into a region of size 2042 [-Wformat-overflow=] 792 | infname = line2; | ~~~~~ ...... 811 | sprintf(buf, "ERROR %s", infname); | ^~ In file included from /usr/include/stdio.h:970, from convert_trace.c:73: In function ‘sprintf’, inlined from ‘main’ at convert_trace.c:811:3: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 7 and 8198 bytes into a destination of size 2048 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o hash_extract.o hash_extract.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o get_comment.o get_comment.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o hash_list.o hash_list.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o trace_dump.o trace_dump.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o hash_tar.o hash_tar.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o append_sff.o append_sff.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o hash_sff.o hash_sff.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o ztr_dump.o ztr_dump.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf_extract_linear.o srf_extract_linear.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf_index_hash.o srf_index_hash.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf_extract_hash.o srf_extract_hash.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf2fasta.o srf2fasta.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf2fastq.o srf2fastq.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf_info.o srf_info.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf_dump_all.o srf_dump_all.c srf_dump_all.c: In function ‘read_filter_from_file’: srf_dump_all.c:580:49: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 580 | fprintf(stderr, "Bad read \"%s\" in read filter \"%s\".\n", read, cThisLine); | ^~ srf_dump_all.c:569:51: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 569 | fprintf(stderr, "Bad prefix \"%s\" in read filter \"%s\".\n", prefix, cThisLine); | ^~ srf_dump_all.c: In function ‘get_read_filter’: srf_dump_all.c:665:41: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 665 | fprintf(stderr, "Bad read \"%s\" in read filter \"%s\".\n", read, filter_value); | ^~ srf_dump_all.c:654:43: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 654 | fprintf(stderr, "Bad prefix \"%s\" in read filter \"%s\".\n", prefix, filter_value); | ^~ srf_dump_all.c:636:46: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 636 | fprintf(stderr, "Bad file name \"%s\" in read filter \"%s\".\n", file_name, filter_value); | ^~ srf_dump_all.c: In function ‘process_srf_to_text_files’: srf_dump_all.c:954:20: warning: ‘/s_’ directive writing 3 bytes into a region of size between 1 and 1024 [-Wformat-overflow=] 954 | sprintf(fn, "%s/s_%d_%04d_dump.txt", dir, lane, tile); | ^~~ In file included from /usr/include/stdio.h:970, from srf_dump_all.c:46: In function ‘sprintf’, inlined from ‘fopen_text’ at srf_dump_all.c:954:5, inlined from ‘process_srf_to_text_files’ at srf_dump_all.c:1002:14: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 19 and 1059 bytes into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf_list.o srf_list.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o hash_exp.o hash_exp.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o cram_index.o cram_index.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o srf_filter.o srf_filter.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' srf_filter.c: In function ‘read_filter_from_file’: srf_filter.c:254:49: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 254 | fprintf(stderr, "Bad read \"%s\" in read filter \"%s\".\n", read, cThisLine); | ^~ srf_filter.c:243:51: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 243 | fprintf(stderr, "Bad prefix \"%s\" in read filter \"%s\".\n", prefix, cThisLine); | ^~ srf_filter.c: In function ‘get_read_filter’: srf_filter.c:356:41: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 356 | fprintf(stderr, "Bad read \"%s\" in read filter \"%s\".\n", read, filter_value); | ^~ srf_filter.c:345:43: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 345 | fprintf(stderr, "Bad prefix \"%s\" in read filter \"%s\".\n", prefix, filter_value); | ^~ srf_filter.c:327:46: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 327 | fprintf(stderr, "Bad file name \"%s\" in read filter \"%s\".\n", file_name, filter_value); | ^~ make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o scramble.o scramble.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o scram_merge.o scram_merge.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o scram_flagstat.o scram_flagstat.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o scram_pileup.o scram_pileup.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o scram_test.o scram_test.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o cram_dump.o cram_dump.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o cram_size.o cram_size.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o makeSCF makeSCF.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/makeSCF makeSCF.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_seq extract_seq.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/extract_seq extract_seq.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o convert_trace convert_trace.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/convert_trace convert_trace.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_qual extract_qual.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/extract_qual extract_qual.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o index_tar index_tar.o -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o index_tar index_tar.o -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_fastq extract_fastq.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/extract_fastq extract_fastq.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scf_dump scf_dump.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scf_dump scf_dump.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scf_info scf_info.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables 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-Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scf_update scf_update.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o get_comment get_comment.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/get_comment get_comment.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_extract hash_extract.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_extract hash_extract.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_list hash_list.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_list hash_list.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_tar hash_tar.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_tar hash_tar.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trace_dump trace_dump.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/trace_dump trace_dump.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_sff hash_sff.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_sff hash_sff.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o append_sff append_sff.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/append_sff append_sff.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o ztr_dump ztr_dump.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/ztr_dump ztr_dump.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_index_hash srf_index_hash.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_index_hash srf_index_hash.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_extract_linear srf_extract_linear.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_extract_linear srf_extract_linear.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_extract_hash srf_extract_hash.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_extract_hash srf_extract_hash.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_dump_all srf_dump_all.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_dump_all srf_dump_all.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf2fasta srf2fasta.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf2fasta srf2fasta.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf2fastq srf2fastq.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf2fastq srf2fastq.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_list srf_list.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_list srf_list.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_filter srf_filter.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_filter srf_filter.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o srf_info srf_info.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/srf_info srf_info.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o hash_exp hash_exp.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/hash_exp hash_exp.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o cram_index cram_index.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/cram_index cram_index.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scram_merge scram_merge.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scram_merge scram_merge.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scramble scramble.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scramble scramble.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o cram_dump cram_dump.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/cram_dump cram_dump.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scram_pileup scram_pileup.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scram_pileup scram_pileup.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scram_flagstat scram_flagstat.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scram_flagstat scram_flagstat.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scram_test scram_test.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/scram_test scram_test.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o cram_size cram_size.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/cram_size cram_size.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' Making all in tests make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/tests' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c -o cram_io_test.o cram_io_test.c make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/tests' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/tests' /bin/sh ../libtool --tag=CC --mode=link gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o cram_io_test cram_io_test.o ../io_lib/libstaden-read.la -lm libtool: link: gcc -Wall -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/cram_io_test cram_io_test.o ../io_lib/.libs/libstaden-read.so -lm make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/tests' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.DYkAYh + umask 022 + cd /builddir/build/BUILD/staden-io_lib-1.14.8-build + '[' /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT ++ dirname /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT + mkdir -p /builddir/build/BUILD/staden-io_lib-1.14.8-build + mkdir /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd io_lib-1.14.8 + /usr/bin/make install DESTDIR=/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT 'INSTALL=/usr/bin/install -p' Making install in io_lib make[1]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' /usr/bin/mkdir -p '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/lib64' /bin/sh ../libtool --mode=install /usr/bin/install -p libstaden-read.la '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/lib64' libtool: install: /usr/bin/install -p .libs/libstaden-read.so.11.0.6 /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/lib64/libstaden-read.so.11.0.6 libtool: install: (cd /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/lib64 && { ln -s -f libstaden-read.so.11.0.6 libstaden-read.so.11 || { rm -f libstaden-read.so.11 && ln -s libstaden-read.so.11.0.6 libstaden-read.so.11; }; }) libtool: install: (cd /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/lib64 && { ln -s -f libstaden-read.so.11.0.6 libstaden-read.so || { rm -f libstaden-read.so && ln -s libstaden-read.so.11.0.6 libstaden-read.so; }; }) libtool: install: /usr/bin/install -p .libs/libstaden-read.lai /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/lib64/libstaden-read.la libtool: install: warning: remember to run `libtool --finish /usr/lib64' make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' make[1]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/io_lib' Making install in progs make[1]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' /usr/bin/mkdir -p '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin' /bin/sh ../libtool --mode=install /usr/bin/install -p convert_trace makeSCF extract_seq extract_qual extract_fastq index_tar scf_dump scf_info scf_update get_comment hash_tar hash_extract hash_list trace_dump hash_sff append_sff ztr_dump srf_dump_all srf_index_hash srf_extract_linear srf_extract_hash srf2fastq srf2fasta srf_filter srf_info srf_list hash_exp cram_dump cram_index scramble scram_merge scram_pileup scram_flagstat scram_test cram_size '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin' libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/convert_trace /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/convert_trace libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/makeSCF /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/makeSCF libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/extract_seq /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/extract_seq libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/extract_qual /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/extract_qual libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/extract_fastq /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/extract_fastq libtool: install: /usr/bin/install -p index_tar /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/index_tar libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/scf_dump /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/scf_dump libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/scf_info /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/scf_info libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/scf_update /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/scf_update libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/get_comment /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/get_comment libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/hash_tar /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/hash_tar libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/hash_extract /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/hash_extract libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/hash_list /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/hash_list libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/trace_dump /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/trace_dump libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/hash_sff /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/hash_sff libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/append_sff /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/append_sff libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/ztr_dump /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/ztr_dump libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf_dump_all /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf_dump_all libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf_index_hash /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf_index_hash libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf_extract_linear /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf_extract_linear libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf_extract_hash /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf_extract_hash libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf2fastq /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf2fastq libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf2fasta /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf2fasta libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf_filter /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf_filter libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf_info /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf_info libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/srf_list /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/srf_list libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/hash_exp /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/hash_exp libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/cram_dump /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/cram_dump libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/cram_index /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/cram_index libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/scramble /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/scramble libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/scram_merge /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/scram_merge libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/scram_pileup /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/scram_pileup libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/scram_flagstat /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/scram_flagstat libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/scram_test /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/scram_test libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64' libtool: install: /usr/bin/install -p .libs/cram_size /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin/cram_size make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' make[1]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/progs' Making install in tests make[1]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/tests' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/tests' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/tests' make[1]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/tests' make[1]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8' make[2]: Entering directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8' /usr/bin/mkdir -p '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin' /usr/bin/install -p staden-io_lib-config '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/bin' /usr/bin/mkdir -p '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/man/man1' /usr/bin/install -p -m 644 man/man1/srf_index_hash.1 man/man1/srf_info.1 man/man1/srf_list.1 man/man1/srf2fasta.1 man/man1/srf2fastq.1 man/man1/scramble.1 '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/man/man1' /usr/bin/mkdir -p '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/man/man3' /usr/bin/install -p -m 644 man/man3/read_scf_header.3 man/man3/read_allocate.3 man/man3/ExperimentFile.3 man/man3/write_reading.3 man/man3/write_scf.3 man/man3/read_deallocate.3 man/man3/fwrite_reading.3 man/man3/read2scf.3 man/man3/scf2read.3 man/man3/fwrite_scf.3 man/man3/write_scf_header.3 man/man3/read_reading.3 man/man3/read_scf.3 man/man3/exp2read.3 man/man3/fread_reading.3 man/man3/read2exp.3 man/man3/fread_scf.3 '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/man/man3' /usr/bin/mkdir -p '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/man/man4' /usr/bin/install -p -m 644 man/man4/Read.4 '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/man/man4' /usr/bin/mkdir -p '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/include/io_lib' /usr/bin/install -p -m 644 io_lib/Read.h io_lib/scf_extras.h io_lib/translate.h io_lib/abi.h io_lib/fpoint.h io_lib/seqIOABI.h io_lib/alf.h io_lib/expFileIO.h io_lib/plain.h io_lib/scf.h io_lib/sff.h io_lib/array.h io_lib/compress.h io_lib/error.h io_lib/mach-io.h io_lib/misc.h io_lib/open_trace_file.h io_lib/tar_format.h io_lib/traceType.h io_lib/xalloc.h io_lib/mFILE.h io_lib/stdio_hack.h io_lib/vlen.h io_lib/hash_table.h io_lib/jenkins_lookup3.h io_lib/os.h io_lib/compression.h io_lib/ztr.h io_lib/deflate_interlaced.h io_lib/srf.h io_lib/pooled_alloc.h io_lib/cram.h io_lib/cram_structs.h io_lib/cram_io.h io_lib/cram_encode.h io_lib/cram_decode.h io_lib/cram_codecs.h io_lib/cram_index.h io_lib/cram_stats.h io_lib/zfio.h '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/include/io_lib' /usr/bin/install -p -m 644 io_lib/scram.h io_lib/bam.h io_lib/sam_header.h io_lib/dstring.h io_lib/string_alloc.h io_lib_config.h io_lib/md5.h io_lib/thread_pool.h io_lib/binning.h '/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/include/io_lib' make[2]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8' make[1]: Leaving directory '/builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8' + find /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT -name '*.la' -delete + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.14.8-4.fc42 --unique-debug-suffix -1.14.8-4.fc42.aarch64 --unique-debug-src-base staden-io_lib-1.14.8-4.fc42.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8 find-debuginfo: starting Extracting debug info from 36 files DWARF-compressing 36 files sepdebugcrcfix: Updated 36 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/staden-io_lib-1.14.8-4.fc42.aarch64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/staden-io_lib-config from /bin/sh to #!/usr/bin/sh + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT Scanned 22 directories and 280 files, processed 0 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/staden-io_lib-1.14.8-build/SPECPARTS/rpm-debuginfo.specpart Processing files: staden-io_lib-1.14.8-4.fc42.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.t2OoH3 + umask 022 + cd /builddir/build/BUILD/staden-io_lib-1.14.8-build + cd io_lib-1.14.8 + DOCDIR=/builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/doc/staden-io_lib + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/doc/staden-io_lib + cp -pr /builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/README /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/doc/staden-io_lib + cp -pr /builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/COPYRIGHT /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/doc/staden-io_lib + cp -pr /builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/CHANGES /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/doc/staden-io_lib + cp -pr /builddir/build/BUILD/staden-io_lib-1.14.8-build/io_lib-1.14.8/docs /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT/usr/share/doc/staden-io_lib + RPM_EC=0 ++ jobs -p + exit 0 Provides: libstaden-read.so.11()(64bit) staden-io_lib = 1.14.8-4.fc42 staden-io_lib(aarch-64) = 1.14.8-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcurl.so.4()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.29)(64bit) libstaden-read.so.11()(64bit) libz.so.1()(64bit) libz.so.1(ZLIB_1.2.0.2)(64bit) rtld(GNU_HASH) Processing files: staden-io_lib-devel-1.14.8-4.fc42.aarch64 Provides: staden-io_lib-devel = 1.14.8-4.fc42 staden-io_lib-devel(aarch-64) = 1.14.8-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/sh libstaden-read.so.11()(64bit) Processing files: staden-io_lib-debugsource-1.14.8-4.fc42.aarch64 Provides: staden-io_lib-debugsource = 1.14.8-4.fc42 staden-io_lib-debugsource(aarch-64) = 1.14.8-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: staden-io_lib-debuginfo-1.14.8-4.fc42.aarch64 Provides: debuginfo(build-id) = 00ba4d7ed3fbc5e800554fdd528dbf7d6509e026 debuginfo(build-id) = 0136f67e2cd7428422f8f342711178ad63659d11 debuginfo(build-id) = 0c64c74c4e941de9fa4090003520e90c4f55b2da debuginfo(build-id) = 2a8b628fe6c36f56488a02d2a32672663c166a81 debuginfo(build-id) = 3e1f3c06d3bfd6b8142d6a2761e4eb45a4238ec6 debuginfo(build-id) = 448f66047b75ce0b4133911087c656c4b10f0e26 debuginfo(build-id) = 4843e4f5ab67101a38b2e7a8193eacadcc10c489 debuginfo(build-id) = 49bff8b41829f3fba337570e7b7461c58671f9f5 debuginfo(build-id) = 58efe0f02479e8bc08a6b0081c626314ecfcf03a debuginfo(build-id) = 5a5c4d27cef6b9755153b170aa7ee17ed425291c debuginfo(build-id) = 6d4a006e8e29989f05eac75d5b45e5c7b2df8fc9 debuginfo(build-id) = 715d081b1e528d01a54366102908947f5caea989 debuginfo(build-id) = 730bc1b424ef6befc58880f9996c6b066fd2813c debuginfo(build-id) = 76a8ce1acadb31d65d58dd46ea6d5ae53a57d170 debuginfo(build-id) = 7791d29deaf54ed0d1a57c48aa15a9460d1d43fa debuginfo(build-id) = 7a1fe3545e793ce62eb054401be9d040e8284acd debuginfo(build-id) = 7bbdb4b47e4a8a3a82b1e8202c8dcd3879b35cab debuginfo(build-id) = 7bed6ee6be8cc4bd408c1f68683748027b75b108 debuginfo(build-id) = 8643c61a51d269944b6a0ce8702b92ae5a7c5eb9 debuginfo(build-id) = 868978c8e55de29a16f6b37b5087e1715d6697d2 debuginfo(build-id) = 8e5f5412558604d9236a70f3e4c308d49f135617 debuginfo(build-id) = a5efc0a36e376e052354bdccd8b6addfed667598 debuginfo(build-id) = aafdcc3020d37422548f937a8895e0a8ef117058 debuginfo(build-id) = b21c0dd55323e7595d928cd0bc2a6c2b5f3a7289 debuginfo(build-id) = b4932b0e62dfe388cc6b62df6c230e001782483d debuginfo(build-id) = b49821ce661db9b3f498b47691d29da5c52590fd debuginfo(build-id) = c6de6307dcf2e632a747b00e131568385ce3613f debuginfo(build-id) = cc8e3bdae9a903e6410e9af84ea4a80718f00643 debuginfo(build-id) = d18e49d1ac7b21e80dae4a2e803f753d973feaf4 debuginfo(build-id) = db150065298214d4c737ff40d0e3e07a38d026ea debuginfo(build-id) = e86e900c372170a5cdfc20cf9d36a6ca456fc07d debuginfo(build-id) = eb3e6d64a560a4a3eb9a9d05339e53503a928393 debuginfo(build-id) = efb6b4763158a8fe84db23078105fda03323beaa debuginfo(build-id) = f47164bb6431f699f38c94699ee0cccf87b09707 debuginfo(build-id) = f4af15e69dd0964619e338979b805fcab1d3321d debuginfo(build-id) = f7a3b04e4d1d1317ba09676637f0b0a84f110975 libstaden-read.so.11.0.6-1.14.8-4.fc42.aarch64.debug()(64bit) staden-io_lib-debuginfo = 1.14.8-4.fc42 staden-io_lib-debuginfo(aarch-64) = 1.14.8-4.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: staden-io_lib-debugsource(aarch-64) = 1.14.8-4.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/staden-io_lib-1.14.8-build/BUILDROOT Wrote: /builddir/build/RPMS/staden-io_lib-devel-1.14.8-4.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/staden-io_lib-1.14.8-4.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/staden-io_lib-debugsource-1.14.8-4.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/staden-io_lib-debuginfo-1.14.8-4.fc42.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.YFHMEr + umask 022 + cd /builddir/build/BUILD/staden-io_lib-1.14.8-build + test -d /builddir/build/BUILD/staden-io_lib-1.14.8-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/staden-io_lib-1.14.8-build + rm -rf /builddir/build/BUILD/staden-io_lib-1.14.8-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild staden-io_lib-1.14.8-4.fc42.src.rpm Finish: build phase for staden-io_lib-1.14.8-4.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1734878024.029913/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/staden-io_lib-1.14.8-4.fc42.src.rpm) Config(child) 0 minutes 35 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "staden-io_lib-debuginfo", "epoch": null, "version": "1.14.8", "release": "4.fc42", "arch": "aarch64" }, { "name": "staden-io_lib", "epoch": null, "version": "1.14.8", "release": "4.fc42", "arch": "src" }, { "name": "staden-io_lib-debugsource", "epoch": null, "version": "1.14.8", "release": "4.fc42", "arch": "aarch64" }, { "name": "staden-io_lib-devel", "epoch": null, "version": "1.14.8", "release": "4.fc42", "arch": "aarch64" }, { "name": "staden-io_lib", "epoch": null, "version": "1.14.8", "release": "4.fc42", "arch": "aarch64" } ] } RPMResults finished