Warning: Permanently added '54.167.216.11' (ED25519) to the list of known hosts. Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-v4zniqz6/morphio/morphio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-v4zniqz6/morphio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1733998956.949809 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.13.0, NVR = mock-5.9-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-v4zniqz6/morphio/morphio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-v4zniqz6/morphio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1733998956.949809 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-v4zniqz6/morphio/morphio.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1733998956.949809/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1733998956.949809/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/8f2136a7e0a951d9dfe12bcc245bdf0dca1d2c4f60f5e7c0f4c1159571dd434c/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/8f2136a7e0a951d9dfe12bcc245bdf0dca1d2c4f60f5e7c0f4c1159571dd434c/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1733998956.949809/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 dnf5-5.2.8.1-2.fc42.aarch64 dnf5-plugins-5.2.8.1-2.fc42.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 50.2 KiB/s | 14.0 KiB | 00m00s Copr repository 100% | 26.1 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 11.7 MiB/s | 6.4 MiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.37-1.fc42 copr_base 8.1 MiB bzip2 aarch64 1.0.8-19.fc42 copr_base 168.7 KiB coreutils aarch64 9.5-11.fc42 copr_base 7.8 MiB cpio aarch64 2.15-2.fc42 copr_base 1.1 MiB diffutils aarch64 3.10-8.fc42 copr_base 1.7 MiB fedora-release-common noarch 42-0.11 fedora 19.8 KiB findutils aarch64 1:4.10.0-4.fc42 copr_base 1.9 MiB gawk aarch64 5.3.0-4.fc42 copr_base 2.4 MiB glibc-minimal-langpack aarch64 2.40.9000-21.fc42 copr_base 0.0 B grep aarch64 3.11-9.fc42 copr_base 1.0 MiB gzip aarch64 1.13-2.fc42 copr_base 422.7 KiB info aarch64 7.1.1-2.fc42 fedora 613.6 KiB patch aarch64 2.7.6-25.fc41 fedora 390.6 KiB redhat-rpm-config noarch 296-1.fc42 fedora 186.6 KiB rpm-build aarch64 4.20.0-1.fc42 fedora 1.4 MiB sed aarch64 4.9-3.fc41 fedora 1.0 MiB shadow-utils aarch64 2:4.17.0~rc1-1.fc42 fedora 4.5 MiB tar aarch64 2:1.35-4.fc41 fedora 3.1 MiB unzip aarch64 6.0-65.fc42 fedora 2.3 MiB util-linux aarch64 2.40.2-8.fc42 fedora 16.9 MiB which aarch64 2.21-42.fc41 fedora 248.2 KiB xz aarch64 1:5.6.3-2.fc42 fedora 1.5 MiB Installing dependencies: add-determinism aarch64 0.4.3-1.fc42 fedora 2.1 MiB alternatives aarch64 1.30-1.fc42 copr_base 88.7 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs aarch64 4.0.2-1.fc42 copr_base 415.2 KiB authselect aarch64 1.5.0-8.fc42 copr_base 179.9 KiB authselect-libs aarch64 1.5.0-8.fc42 copr_base 865.5 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils aarch64 2.43.50-9.fc42 copr_base 28.9 MiB build-reproducibility-srpm-macros noarch 0.4.3-1.fc42 fedora 735.0 B bzip2-libs aarch64 1.0.8-19.fc42 copr_base 71.1 KiB ca-certificates noarch 2024.2.69_v8.0.401-3.fc42 fedora 2.6 MiB coreutils-common aarch64 9.5-11.fc42 copr_base 11.2 MiB cracklib aarch64 2.9.11-6.fc42 copr_base 417.7 KiB crypto-policies noarch 20241128-1.gitbb7b0b0.fc42 fedora 137.3 KiB curl aarch64 8.11.1-1.fc42 fedora 452.0 KiB cyrus-sasl-lib aarch64 2.1.28-27.fc41 fedora 3.1 MiB debugedit aarch64 5.1-2.fc42 copr_base 241.5 KiB dwz aarch64 0.15-8.fc42 copr_base 319.6 KiB ed aarch64 1.20.2-2.fc42 copr_base 152.9 KiB efi-srpm-macros noarch 5-13.fc42 fedora 40.2 KiB elfutils aarch64 0.192-7.fc42 copr_base 3.1 MiB elfutils-debuginfod-client aarch64 0.192-7.fc42 copr_base 141.3 KiB elfutils-default-yama-scope noarch 0.192-7.fc42 copr_base 1.8 KiB elfutils-libelf aarch64 0.192-7.fc42 copr_base 1.2 MiB elfutils-libs aarch64 0.192-7.fc42 copr_base 734.9 KiB fedora-gpg-keys noarch 42-0.3 fedora 126.4 KiB fedora-release noarch 42-0.11 fedora 0.0 B fedora-release-identity-basic noarch 42-0.11 fedora 719.0 B fedora-repos noarch 42-0.3 fedora 4.9 KiB fedora-repos-rawhide noarch 42-0.3 fedora 2.2 KiB file aarch64 5.45-8.fc42 fedora 139.5 KiB file-libs aarch64 5.45-8.fc42 fedora 10.0 MiB filesystem aarch64 3.18-29.fc42 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal aarch64 15.2-4.fc42 fedora 12.7 MiB gdbm aarch64 1:1.23-7.fc42 copr_base 537.9 KiB gdbm-libs aarch64 1:1.23-7.fc42 copr_base 230.7 KiB ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B glibc aarch64 2.40.9000-21.fc42 copr_base 6.1 MiB glibc-common aarch64 2.40.9000-21.fc42 copr_base 1.3 MiB glibc-gconv-extra aarch64 2.40.9000-21.fc42 copr_base 18.3 MiB gmp aarch64 1:6.3.0-2.fc42 copr_base 651.1 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-5.fc42 fedora 60.8 KiB jansson aarch64 2.14-1.fc42 copr_base 90.8 KiB json-c aarch64 0.18-1.fc42 copr_base 135.7 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs aarch64 1.6.3-4.fc42 copr_base 96.8 KiB krb5-libs aarch64 1.21.3-3.fc42 fedora 2.6 MiB libacl aarch64 2.3.2-2.fc42 copr_base 66.3 KiB libarchive aarch64 3.7.7-1.fc42 fedora 912.2 KiB libattr aarch64 2.5.2-4.fc41 fedora 196.6 KiB libblkid aarch64 2.40.2-8.fc42 fedora 418.6 KiB libbrotli aarch64 1.1.0-5.fc42 copr_base 904.3 KiB libcap aarch64 2.71-1.fc42 fedora 509.8 KiB libcap-ng aarch64 0.8.5-3.fc41 fedora 417.2 KiB libcom_err aarch64 1.47.1-6.fc42 copr_base 109.9 KiB libcurl aarch64 8.11.1-1.fc42 fedora 845.2 KiB libeconf aarch64 0.7.5-1.fc42 fedora 78.7 KiB libevent aarch64 2.1.12-14.fc41 fedora 1.5 MiB libfdisk aarch64 2.40.2-8.fc42 fedora 482.9 KiB libffi aarch64 3.4.6-3.fc42 copr_base 152.5 KiB libgcc aarch64 14.2.1-6.fc42 fedora 222.2 KiB libgomp aarch64 14.2.1-6.fc42 fedora 503.2 KiB libidn2 aarch64 2.3.7-2.fc41 fedora 457.2 KiB libmount aarch64 2.40.2-8.fc42 fedora 483.9 KiB libnghttp2 aarch64 1.64.0-1.fc42 fedora 262.2 KiB libnsl2 aarch64 2.0.1-2.fc41 fedora 222.0 KiB libpkgconf aarch64 2.3.0-1.fc42 fedora 198.1 KiB libpsl aarch64 0.21.5-4.fc41 fedora 196.6 KiB libpwquality aarch64 1.4.5-11.fc41 fedora 1.1 MiB libselinux aarch64 3.8-0.rc1.2.fc42 fedora 195.6 KiB libsemanage aarch64 3.8-0.rc1.1.fc42 fedora 353.3 KiB libsepol aarch64 3.8-0.rc1.1.fc42 fedora 809.9 KiB libsmartcols aarch64 2.40.2-8.fc42 fedora 288.5 KiB libssh aarch64 0.11.1-1.fc42 fedora 649.6 KiB libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B libstdc++ aarch64 14.2.1-6.fc42 fedora 2.8 MiB libtasn1 aarch64 4.19.0-9.fc41 fedora 283.8 KiB libtirpc aarch64 1.3.6-1.fc42 copr_base 205.5 KiB libtool-ltdl aarch64 2.5.4-1.fc42 fedora 92.1 KiB libunistring aarch64 1.1-8.fc41 fedora 1.8 MiB libuuid aarch64 2.40.2-8.fc42 fedora 197.5 KiB libverto aarch64 0.3.2-9.fc41 fedora 197.5 KiB libxcrypt aarch64 4.4.36-11.fc42 copr_base 269.3 KiB libxml2 aarch64 2.12.8-2.fc41 fedora 2.1 MiB libzstd aarch64 1.5.6-2.fc41 fedora 796.0 KiB lua-libs aarch64 5.4.7-1.fc42 fedora 393.1 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs aarch64 1.10.0-1.fc41 fedora 261.6 KiB mpfr aarch64 4.2.1-5.fc41 fedora 818.9 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs aarch64 6.5-2.20240629.fc41 fedora 2.2 MiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap aarch64 2.6.8-6.fc42 fedora 747.0 KiB openssl-libs aarch64 1:3.2.2-8.fc42 fedora 7.2 MiB p11-kit aarch64 0.25.5-4.fc42 fedora 2.6 MiB p11-kit-trust aarch64 0.25.5-4.fc42 fedora 655.7 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam aarch64 1.7.0-3.fc42 fedora 4.3 MiB pam-libs aarch64 1.7.0-3.fc42 fedora 223.4 KiB pcre2 aarch64 10.44-1.fc41.1 fedora 905.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf aarch64 2.3.0-1.fc42 fedora 240.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB pkgconf-pkg-config aarch64 2.3.0-1.fc42 fedora 990.0 B popt aarch64 1.19-7.fc41 fedora 272.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.16.3-1.fc42 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 fedora 500.0 B qt6-srpm-macros noarch 6.8.1-4.fc42 fedora 456.0 B readline aarch64 8.2-11.fc42 fedora 753.3 KiB rpm aarch64 4.20.0-1.fc42 fedora 3.9 MiB rpm-build-libs aarch64 4.20.0-1.fc42 fedora 262.7 KiB rpm-libs aarch64 4.20.0-1.fc42 fedora 797.9 KiB rpm-sequoia aarch64 1.7.0-3.fc42 fedora 2.2 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs aarch64 3.47.2-1.fc42 fedora 1.4 MiB systemd-libs aarch64 257-1.fc42 fedora 2.4 MiB util-linux-core aarch64 2.40.2-8.fc42 fedora 6.2 MiB xxhash-libs aarch64 0.8.2-4.fc42 fedora 212.3 KiB xz-libs aarch64 1:5.6.3-2.fc42 fedora 266.4 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip aarch64 3.0-42.fc42 fedora 755.7 KiB zlib-ng-compat aarch64 2.2.2-1.fc42 fedora 133.8 KiB zstd aarch64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 51 MiB. Need to download 0 B. After this operation, 230 MiB extra will be used (install 230 MiB, remove 0 B). [1/1] tar-2:1.35-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] redhat-rpm-config-0:296-1.fc42.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/3] rpm-build-0:4.20.0-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [3/3] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/4] unzip-0:6.0-65.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [4/4] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/5] which-0:2.21-42.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded 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-------------------------------------------------------------------------------- [144/144] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/145] libpsl-0:0.21.5-4.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [145/145] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/146] libssh-0:0.11.1-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [146/146] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/147] openldap-0:2.6.8-6.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [147/147] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/148] libunistring-0:1.1-8.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [148/148] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/149] publicsuffix-list-dafsa-0:202 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [149/149] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/150] libssh-config-0:0.11.1-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [150/150] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/151] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [151/151] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/152] libevent-0:2.1.12-14.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [152/152] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/153] libtool-ltdl-0:2.5.4-1.fc42.a 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [153/153] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/154] libbrotli-0:1.1.0-5.fc42.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [154/154] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing OpenPGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing OpenPGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. 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Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [138/156] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [139/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [140/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [141/156] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [142/156] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [143/156] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [144/156] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [145/156] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [146/156] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [147/156] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [148/156] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [149/156] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [150/156] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s [151/156] Installing rpm-build-0:4.20.0 100% | 279.4 MiB/s | 1.4 MiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 360.7 MiB/s | 17.0 MiB | 00m00s [154/156] Installing authselect-0:1.5.0 100% | 60.0 MiB/s | 184.3 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 122.2 MiB/s | 250.4 KiB | 00m00s [156/156] Installing info-0:7.1.1-2.fc4 100% | 284.9 KiB/s | 614.0 KiB | 00m02s Warning: skipped OpenPGP checks for 41 packages from repository: copr_base Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.4.3-1.fc42.aarch64 alternatives-1.30-1.fc42.aarch64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc42.aarch64 authselect-1.5.0-8.fc42.aarch64 authselect-libs-1.5.0-8.fc42.aarch64 basesystem-11-21.fc41.noarch bash-5.2.37-1.fc42.aarch64 binutils-2.43.50-9.fc42.aarch64 build-reproducibility-srpm-macros-0.4.3-1.fc42.noarch bzip2-1.0.8-19.fc42.aarch64 bzip2-libs-1.0.8-19.fc42.aarch64 ca-certificates-2024.2.69_v8.0.401-3.fc42.noarch coreutils-9.5-11.fc42.aarch64 coreutils-common-9.5-11.fc42.aarch64 cpio-2.15-2.fc42.aarch64 cracklib-2.9.11-6.fc42.aarch64 crypto-policies-20241128-1.gitbb7b0b0.fc42.noarch curl-8.11.1-1.fc42.aarch64 cyrus-sasl-lib-2.1.28-27.fc41.aarch64 debugedit-5.1-2.fc42.aarch64 diffutils-3.10-8.fc42.aarch64 dwz-0.15-8.fc42.aarch64 ed-1.20.2-2.fc42.aarch64 efi-srpm-macros-5-13.fc42.noarch elfutils-0.192-7.fc42.aarch64 elfutils-debuginfod-client-0.192-7.fc42.aarch64 elfutils-default-yama-scope-0.192-7.fc42.noarch elfutils-libelf-0.192-7.fc42.aarch64 elfutils-libs-0.192-7.fc42.aarch64 fedora-gpg-keys-42-0.3.noarch fedora-release-42-0.11.noarch fedora-release-common-42-0.11.noarch fedora-release-identity-basic-42-0.11.noarch fedora-repos-42-0.3.noarch fedora-repos-rawhide-42-0.3.noarch file-5.45-8.fc42.aarch64 file-libs-5.45-8.fc42.aarch64 filesystem-3.18-29.fc42.aarch64 findutils-4.10.0-4.fc42.aarch64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc42.aarch64 gdb-minimal-15.2-4.fc42.aarch64 gdbm-1.23-7.fc42.aarch64 gdbm-libs-1.23-7.fc42.aarch64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-21.fc42.aarch64 glibc-common-2.40.9000-21.fc42.aarch64 glibc-gconv-extra-2.40.9000-21.fc42.aarch64 glibc-minimal-langpack-2.40.9000-21.fc42.aarch64 gmp-6.3.0-2.fc42.aarch64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-5.fc42.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc42.aarch64 gzip-1.13-2.fc42.aarch64 info-7.1.1-2.fc42.aarch64 jansson-2.14-1.fc42.aarch64 json-c-0.18-1.fc42.aarch64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc42.aarch64 krb5-libs-1.21.3-3.fc42.aarch64 libacl-2.3.2-2.fc42.aarch64 libarchive-3.7.7-1.fc42.aarch64 libattr-2.5.2-4.fc41.aarch64 libblkid-2.40.2-8.fc42.aarch64 libbrotli-1.1.0-5.fc42.aarch64 libcap-2.71-1.fc42.aarch64 libcap-ng-0.8.5-3.fc41.aarch64 libcom_err-1.47.1-6.fc42.aarch64 libcurl-8.11.1-1.fc42.aarch64 libeconf-0.7.5-1.fc42.aarch64 libevent-2.1.12-14.fc41.aarch64 libfdisk-2.40.2-8.fc42.aarch64 libffi-3.4.6-3.fc42.aarch64 libgcc-14.2.1-6.fc42.aarch64 libgomp-14.2.1-6.fc42.aarch64 libidn2-2.3.7-2.fc41.aarch64 libmount-2.40.2-8.fc42.aarch64 libnghttp2-1.64.0-1.fc42.aarch64 libnsl2-2.0.1-2.fc41.aarch64 libpkgconf-2.3.0-1.fc42.aarch64 libpsl-0.21.5-4.fc41.aarch64 libpwquality-1.4.5-11.fc41.aarch64 libselinux-3.8-0.rc1.2.fc42.aarch64 libsemanage-3.8-0.rc1.1.fc42.aarch64 libsepol-3.8-0.rc1.1.fc42.aarch64 libsmartcols-2.40.2-8.fc42.aarch64 libssh-0.11.1-1.fc42.aarch64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-6.fc42.aarch64 libtasn1-4.19.0-9.fc41.aarch64 libtirpc-1.3.6-1.fc42.aarch64 libtool-ltdl-2.5.4-1.fc42.aarch64 libunistring-1.1-8.fc41.aarch64 libuuid-2.40.2-8.fc42.aarch64 libverto-0.3.2-9.fc41.aarch64 libxcrypt-4.4.36-11.fc42.aarch64 libxml2-2.12.8-2.fc41.aarch64 libzstd-1.5.6-2.fc41.aarch64 lua-libs-5.4.7-1.fc42.aarch64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.aarch64 mpfr-4.2.1-5.fc41.aarch64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.aarch64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-6.fc42.aarch64 openssl-libs-3.2.2-8.fc42.aarch64 p11-kit-0.25.5-4.fc42.aarch64 p11-kit-trust-0.25.5-4.fc42.aarch64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.7.0-3.fc42.aarch64 pam-libs-1.7.0-3.fc42.aarch64 patch-2.7.6-25.fc41.aarch64 pcre2-10.44-1.fc41.1.aarch64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.aarch64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.aarch64 popt-1.19-7.fc41.aarch64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.16.3-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.1-4.fc42.noarch readline-8.2-11.fc42.aarch64 redhat-rpm-config-296-1.fc42.noarch rpm-4.20.0-1.fc42.aarch64 rpm-build-4.20.0-1.fc42.aarch64 rpm-build-libs-4.20.0-1.fc42.aarch64 rpm-libs-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.aarch64 setup-2.15.0-5.fc41.noarch shadow-utils-4.17.0~rc1-1.fc42.aarch64 sqlite-libs-3.47.2-1.fc42.aarch64 systemd-libs-257-1.fc42.aarch64 tar-1.35-4.fc41.aarch64 unzip-6.0-65.fc42.aarch64 util-linux-2.40.2-8.fc42.aarch64 util-linux-core-2.40.2-8.fc42.aarch64 which-2.21-42.fc41.aarch64 xxhash-libs-0.8.2-4.fc42.aarch64 xz-5.6.3-2.fc42.aarch64 xz-libs-5.6.3-2.fc42.aarch64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-42.fc42.aarch64 zlib-ng-compat-2.2.2-1.fc42.aarch64 zstd-1.5.6-2.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1732492800 Wrote: /builddir/build/SRPMS/morphio-3.4.0-7.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1733998956.949809/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-v4zniqz6/morphio/morphio.spec) Config(child) 0 minutes 13 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/morphio-3.4.0-7.fc42.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1733998956.949809/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1733998956.949809/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1733998956.949809/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc42.aarch64 rpm-sequoia-1.7.0-3.fc42.aarch64 dnf5-5.2.8.1-2.fc42.aarch64 dnf5-plugins-5.2.8.1-2.fc42.aarch64 Finish: chroot init Start: build phase for morphio-3.4.0-7.fc42.src.rpm Start: build setup for morphio-3.4.0-7.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1732492800 Wrote: /builddir/build/SRPMS/morphio-3.4.0-7.fc42.src.rpm Updating and loading repositories: Copr repository 100% | 109.8 KiB/s | 1.5 KiB | 00m00s fedora 100% | 148.4 KiB/s | 14.0 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: boost-devel aarch64 1.83.0-9.fc42 fedora 143.0 MiB catch2-devel aarch64 2.13.10-5.fc42 copr_base 952.9 KiB cmake aarch64 3.31.2-1.fc42 fedora 28.8 MiB gcc-c++ aarch64 14.2.1-6.fc42 fedora 36.8 MiB gsl-lite-devel aarch64 0.42.0-1.fc42 copr_base 310.4 KiB gulrak-filesystem-devel aarch64 1.5.14-9.fc42 copr_base 272.2 KiB hdf5-devel aarch64 1.14.5-1.fc42 copr_base 3.2 MiB highfive-devel aarch64 2.10.0-2.fc42 copr_base 377.1 KiB lexertl14-devel aarch64 1:0.1.0^20240506gitbca1359-3.fc42 fedora 573.7 KiB ninja-build aarch64 1.12.1-3.fc41 fedora 459.7 KiB pybind11-devel aarch64 2.13.6-1.fc42 fedora 847.8 KiB python3-devel aarch64 3.13.1-2.fc42 fedora 1.8 MiB tomcli noarch 0.8.0-1.fc42 fedora 125.7 KiB Installing dependencies: annobin-docs noarch 12.79-1.fc42 fedora 98.6 KiB annobin-plugin-gcc aarch64 12.79-1.fc42 fedora 997.2 KiB boost aarch64 1.83.0-9.fc42 fedora 1.3 KiB boost-atomic aarch64 1.83.0-9.fc42 fedora 67.6 KiB boost-chrono aarch64 1.83.0-9.fc42 fedora 67.7 KiB boost-container aarch64 1.83.0-9.fc42 fedora 67.7 KiB boost-context aarch64 1.83.0-9.fc42 fedora 67.4 KiB boost-contract aarch64 1.83.0-9.fc42 fedora 131.8 KiB boost-coroutine aarch64 1.83.0-9.fc42 fedora 67.7 KiB boost-date-time aarch64 1.83.0-9.fc42 fedora 67.3 KiB boost-fiber aarch64 1.83.0-9.fc42 fedora 131.8 KiB boost-filesystem aarch64 1.83.0-9.fc42 fedora 132.0 KiB boost-graph aarch64 1.83.0-9.fc42 fedora 324.2 KiB boost-iostreams aarch64 1.83.0-9.fc42 fedora 131.7 KiB boost-json aarch64 1.83.0-9.fc42 fedora 324.0 KiB boost-locale aarch64 1.83.0-9.fc42 fedora 580.4 KiB boost-log aarch64 1.83.0-9.fc42 fedora 1.4 MiB boost-math aarch64 1.83.0-9.fc42 fedora 847.2 KiB boost-nowide aarch64 1.83.0-9.fc42 fedora 67.7 KiB boost-numpy3 aarch64 1.83.0-9.fc42 fedora 67.7 KiB boost-program-options aarch64 1.83.0-9.fc42 fedora 259.7 KiB boost-python3 aarch64 1.83.0-9.fc42 fedora 263.1 KiB boost-random aarch64 1.83.0-9.fc42 fedora 67.7 KiB boost-regex aarch64 1.83.0-9.fc42 fedora 259.7 KiB boost-serialization aarch64 1.83.0-9.fc42 fedora 454.1 KiB boost-stacktrace aarch64 1.83.0-9.fc42 fedora 200.0 KiB boost-system aarch64 1.83.0-9.fc42 fedora 67.3 KiB boost-test aarch64 1.83.0-9.fc42 fedora 646.6 KiB boost-thread aarch64 1.83.0-9.fc42 fedora 131.8 KiB boost-timer aarch64 1.83.0-9.fc42 fedora 67.7 KiB boost-type_erasure aarch64 1.83.0-9.fc42 fedora 67.7 KiB boost-wave aarch64 1.83.0-9.fc42 fedora 644.4 KiB cmake-data noarch 3.31.2-1.fc42 fedora 8.5 MiB cmake-filesystem aarch64 3.31.2-1.fc42 fedora 0.0 B cmake-rpm-macros noarch 3.31.2-1.fc42 fedora 7.5 KiB cpp aarch64 14.2.1-6.fc42 fedora 33.7 MiB emacs-filesystem noarch 1:30.0-3.fc41 fedora 0.0 B expat aarch64 2.6.4-1.fc42 copr_base 343.6 KiB flexiblas aarch64 3.4.4-3.fc42 copr_base 48.5 KiB flexiblas-netlib aarch64 3.4.4-3.fc42 copr_base 9.2 MiB flexiblas-openblas-openmp aarch64 3.4.4-3.fc42 copr_base 66.3 KiB gcc aarch64 14.2.1-6.fc42 fedora 96.6 MiB gcc-gfortran aarch64 14.2.1-6.fc42 fedora 35.7 MiB gcc-plugin-annobin aarch64 14.2.1-6.fc42 fedora 73.5 KiB glibc-devel aarch64 2.40.9000-21.fc42 copr_base 2.2 MiB hdf5 aarch64 1.14.5-1.fc42 copr_base 8.0 MiB jsoncpp aarch64 1.9.5-8.fc42 copr_base 268.8 KiB kernel-headers aarch64 6.13.0-0.rc1.e70140ba0d2b.14.fc42 fedora 6.4 MiB libaec aarch64 1.1.3-1.fc42 fedora 410.2 KiB libaec-devel aarch64 1.1.3-1.fc42 fedora 12.5 KiB libasan aarch64 14.2.1-6.fc42 fedora 1.5 MiB libatomic aarch64 14.2.1-6.fc42 fedora 69.0 KiB libb2 aarch64 0.98.1-12.fc41 fedora 202.2 KiB libgfortran aarch64 14.2.1-6.fc42 fedora 1.5 MiB libicu aarch64 76.1-1.fc42 fedora 36.5 MiB libicu-devel aarch64 76.1-1.fc42 fedora 5.1 MiB libmpc aarch64 1.3.1-6.fc41 fedora 280.8 KiB libstdc++-devel aarch64 14.2.1-6.fc42 fedora 15.1 MiB libubsan aarch64 14.2.1-6.fc42 fedora 475.2 KiB libuv aarch64 1:1.49.2-1.fc42 fedora 664.8 KiB libxcrypt-devel aarch64 4.4.36-11.fc42 copr_base 30.5 KiB make aarch64 1:4.4.1-9.fc42 fedora 1.8 MiB mpdecimal aarch64 2.5.1-16.fc41 fedora 328.9 KiB openblas aarch64 0.3.28-2.fc42 fedora 106.6 KiB openblas-openmp aarch64 0.3.28-2.fc42 fedora 20.6 MiB pyproject-rpm-macros noarch 1.16.3-1.fc42 fedora 113.7 KiB python-pip-wheel noarch 24.3.1-1.fc42 fedora 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB python3 aarch64 3.13.1-2.fc42 fedora 82.5 KiB python3-click noarch 8.1.7-6.fc41 fedora 1.1 MiB python3-libs aarch64 3.13.1-2.fc42 fedora 41.7 MiB python3-numpy aarch64 1:1.26.4-8.fc41 fedora 41.2 MiB python3-packaging noarch 24.2-2.fc42 fedora 555.7 KiB python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB python3-tomlkit noarch 0.13.2-1.fc42 fedora 453.7 KiB rhash aarch64 1.4.5-1.fc42 fedora 587.1 KiB tomcli+tomlkit noarch 0.8.0-1.fc42 fedora 7.8 KiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB vim-filesystem noarch 2:9.1.906-1.fc42 fedora 40.0 B zlib-ng-compat-devel aarch64 2.2.2-1.fc42 fedora 106.8 KiB Transaction Summary: Installing: 94 packages Total size of inbound packages is 146 MiB. Need to download 12 MiB. After this operation, 601 MiB extra will be used (install 601 MiB, remove 0 B). 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cmake-data-0:3.31.2- 100% | 80.2 MiB/s | 9.1 MiB | 00m00s [82/96] Installing cmake-0:3.31.2-1.fc4 100% | 347.0 MiB/s | 28.8 MiB | 00m00s [83/96] Installing libstdc++-devel-0:14 100% | 276.9 MiB/s | 15.2 MiB | 00m00s [84/96] Installing gcc-c++-0:14.2.1-6.f 100% | 329.1 MiB/s | 36.9 MiB | 00m00s [85/96] Installing pybind11-devel-0:2.1 100% | 209.0 MiB/s | 856.0 KiB | 00m00s [86/96] Installing hdf5-devel-0:1.14.5- 100% | 295.7 MiB/s | 3.3 MiB | 00m00s [87/96] Installing gcc-plugin-annobin-0 100% | 4.9 MiB/s | 75.1 KiB | 00m00s [88/96] Installing annobin-plugin-gcc-0 100% | 51.3 MiB/s | 998.9 KiB | 00m00s [89/96] Installing python3-devel-0:3.13 100% | 36.3 MiB/s | 1.8 MiB | 00m00s [90/96] Installing boost-devel-0:1.83.0 100% | 202.2 MiB/s | 145.8 MiB | 00m01s [91/96] Installing ninja-build-0:1.12.1 100% | 150.7 MiB/s | 463.0 KiB | 00m00s [92/96] Installing lexertl14-devel-1:0. 100% | 114.3 MiB/s | 585.5 KiB | 00m00s [93/96] Installing catch2-devel-0:2.13. 100% | 234.6 MiB/s | 960.8 KiB | 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Finish: build setup for morphio-3.4.0-7.fc42.src.rpm Start: rpmbuild morphio-3.4.0-7.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1732492800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.i5aV8v + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + test -d /builddir/build/BUILD/morphio-3.4.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/morphio-3.4.0-build + /usr/bin/rm -rf /builddir/build/BUILD/morphio-3.4.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/morphio-3.4.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.xwUNlX + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd /builddir/build/BUILD/morphio-3.4.0-build + rm -rf MorphIO-3.4.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/MorphIO-3.4.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd MorphIO-3.4.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/stop-them-using-a-random-env-var.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/remove-upstreams-flags.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/install-python-shared-object.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-Downstream-only-Allow-passing-CMake-defs-through-an-.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/pytest-float32.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/use-lib_install_dir.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/allow_use_of_external_ghc_filesystem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/dont_use_cmake_for_finding_ghc_filesystem.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/515.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/512.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + rm -rvf 3rdparty/GSL_LITE removed directory '3rdparty/GSL_LITE' + sed -r -i /GSL_LITE/d MANIFEST.in + sed -r -i '/director.*\(.*(gsl-lite|GSL_LITE).*\)/d' 3rdparty/CMakeLists.txt + sed -r -i -e /TARGET_PROPERTY:gsl-lite,INTERFACE_INCLUDE_DIRECTORIES/d -e 's/PUBLIC[[:blank:]]+gsl-lite[[:blank:]]+(PRIVATE)/\1/' src/CMakeLists.txt + grep -ErIl '#[[:blank:]]*include[[:blank:]]+["<]gsl/gsl[">]' . + xargs -r sed -r -i 's@(#[[:blank:]]*include[[:blank:]]+["<]gsl/gsl)([">])@\1-lite\.hpp\2@' + rm -rvf 3rdparty/lexertl + ln -s /usr/include/lexertl 3rdparty/ + find . -type f -name .gitignore -print -delete ./.gitignore ./doc/source/doxygen/.gitignore + tomcli set pyproject.toml lists delitem --type regex --no-first build-system.requires '^(cmake|ninja)$' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Bsisw8 + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement not satisfied: h5py>=2.9.0 Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement not satisfied: pytest>=6.0 Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 1.26.4) Exiting dependency generation pass: all requirements files + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/morphio-3.4.0-7.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 232.6 KiB/s | 14.0 KiB | 00m00s Copr repository 100% | 6.0 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "boost-devel-1.83.0-9.fc42.aarch64" is already installed. Package "cmake-3.31.2-1.fc42.aarch64" is already installed. Package "catch2-devel-2.13.10-5.fc42.aarch64" is already installed. Package "gulrak-filesystem-devel-1.5.14-9.fc42.aarch64" is already installed. Package "gsl-lite-devel-0.42.0-1.fc42.aarch64" is already installed. Package "highfive-devel-2.10.0-2.fc42.aarch64" is already installed. Package "pybind11-devel-2.13.6-1.fc42.aarch64" is already installed. Package "gcc-c++-14.2.1-6.fc42.aarch64" is already installed. Package "gsl-lite-devel-0.42.0-1.fc42.aarch64" is already installed. Package "gulrak-filesystem-devel-1.5.14-9.fc42.aarch64" is already installed. Package "hdf5-devel-1.14.5-1.fc42.aarch64" is already installed. Package "highfive-devel-2.10.0-2.fc42.aarch64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-3.fc42.aarch64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-3.fc42.aarch64" is already installed. Package "ninja-build-1.12.1-3.fc41.aarch64" is already installed. Package "pybind11-devel-2.13.6-1.fc42.aarch64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.aarch64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.aarch64" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "tomcli-0.8.0-1.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-h5py aarch64 3.12.1-3.fc42 copr_base 4.5 MiB python3-pip noarch 24.3.1-1.fc42 fedora 11.3 MiB python3-pytest noarch 8.3.4-1.fc42 fedora 20.8 MiB Installing dependencies: liblzf aarch64 3.6-29.fc41 fedora 409.8 KiB python3-cached_property noarch 2.0.1-1.fc42 fedora 34.8 KiB python3-iniconfig noarch 1.1.1-23.fc41 fedora 20.6 KiB python3-pluggy noarch 1.5.0-1.fc41 fedora 193.2 KiB python3-six noarch 1.16.0-23.fc41 fedora 118.3 KiB Transaction Summary: Installing: 8 packages Total size of inbound packages is 6 MiB. Need to download 6 MiB. After this operation, 37 MiB extra will be used (install 37 MiB, remove 0 B). [1/8] liblzf-0:3.6-29.fc41.aarch64 100% | 1.8 MiB/s | 27.9 KiB | 00m00s [2/8] python3-pip-0:24.3.1-1.fc42.noarc 100% | 129.6 MiB/s | 2.7 MiB | 00m00s [3/8] python3-cached_property-0:2.0.1-1 100% | 3.2 MiB/s | 19.9 KiB | 00m00s [4/8] python3-six-0:1.16.0-23.fc41.noar 100% | 20.1 MiB/s | 41.2 KiB | 00m00s [5/8] python3-iniconfig-0:1.1.1-23.fc41 100% | 5.9 MiB/s | 18.1 KiB | 00m00s [6/8] python3-pytest-0:8.3.4-1.fc42.noa 100% | 215.0 MiB/s | 2.2 MiB | 00m00s [7/8] python3-pluggy-0:1.5.0-1.fc41.noa 100% | 14.3 MiB/s | 58.6 KiB | 00m00s [8/8] python3-h5py-0:3.12.1-3.fc42.aarc 100% | 4.5 MiB/s | 1.0 MiB | 00m00s -------------------------------------------------------------------------------- [8/8] Total 100% | 23.4 MiB/s | 6.1 MiB | 00m00s Running transaction [ 1/10] Verify package files 100% | 347.0 B/s | 8.0 B | 00m00s [ 2/10] Prepare transaction 100% | 160.0 B/s | 8.0 B | 00m00s [ 3/10] Installing python3-pluggy-0:1.5 100% | 97.4 MiB/s | 199.4 KiB | 00m00s [ 4/10] Installing python3-iniconfig-0: 100% | 23.0 MiB/s | 23.6 KiB | 00m00s [ 5/10] Installing python3-six-0:1.16.0 100% | 117.9 MiB/s | 120.7 KiB | 00m00s [ 6/10] Installing python3-cached_prope 100% | 36.6 MiB/s | 37.5 KiB | 00m00s [ 7/10] Installing liblzf-0:3.6-29.fc41 100% | 201.3 MiB/s | 412.2 KiB | 00m00s [ 8/10] Installing python3-h5py-0:3.12. 100% | 227.9 MiB/s | 4.6 MiB | 00m00s [ 9/10] Installing python3-pytest-0:8.3 100% | 304.5 MiB/s | 21.0 MiB | 00m00s [10/10] Installing python3-pip-0:24.3.1 100% | 115.0 MiB/s | 11.6 MiB | 00m00s Warning: skipped OpenPGP checks for 1 package from repository: copr_base Complete! Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1732492800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.4spvK2 + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement satisfied: h5py>=2.9.0 (installed: h5py 3.12.1) Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement satisfied: pytest>=6.0 (installed: pytest 8.3.4) Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 1.26.4) Handling setuptools>=24.2.0 from build-system.requires Requirement not satisfied: setuptools>=24.2.0 Handling wheel from build-system.requires Requirement not satisfied: wheel Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/morphio-3.4.0-7.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 160.4 KiB/s | 14.0 KiB | 00m00s Copr repository 100% | 76.9 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "boost-devel-1.83.0-9.fc42.aarch64" is already installed. Package "cmake-3.31.2-1.fc42.aarch64" is already installed. Package "catch2-devel-2.13.10-5.fc42.aarch64" is already installed. Package "gulrak-filesystem-devel-1.5.14-9.fc42.aarch64" is already installed. Package "gsl-lite-devel-0.42.0-1.fc42.aarch64" is already installed. Package "highfive-devel-2.10.0-2.fc42.aarch64" is already installed. Package "pybind11-devel-2.13.6-1.fc42.aarch64" is already installed. Package "gcc-c++-14.2.1-6.fc42.aarch64" is already installed. Package "gsl-lite-devel-0.42.0-1.fc42.aarch64" is already installed. Package "gulrak-filesystem-devel-1.5.14-9.fc42.aarch64" is already installed. Package "hdf5-devel-1.14.5-1.fc42.aarch64" is already installed. Package "highfive-devel-2.10.0-2.fc42.aarch64" is already installed. Package Arch Version Repository Size Installing: python3-setuptools noarch 74.1.3-4.fc42 fedora 8.4 MiB python3-wheel noarch 1:0.44.0-1.fc42 fedora 521.0 KiB Transaction Summary: Installing: 2 packages Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-3.fc42.aarch64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-3.fc42.aarch64" is already installed. Package "ninja-build-1.12.1-3.fc41.aarch64" is already installed. Package "pybind11-devel-2.13.6-1.fc42.aarch64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.aarch64" is already installed. Package "python3-h5py-3.12.1-3.fc42.aarch64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.aarch64" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "tomcli-0.8.0-1.fc42.noarch" is already installed. Total size of inbound packages is 2 MiB. Need to download 2 MiB. After this operation, 9 MiB extra will be used (install 9 MiB, remove 0 B). [1/2] python3-wheel-1:0.44.0-1.fc42.noa 100% | 11.0 MiB/s | 168.8 KiB | 00m00s [2/2] python3-setuptools-0:74.1.3-4.fc4 100% | 75.5 MiB/s | 2.0 MiB | 00m00s -------------------------------------------------------------------------------- [2/2] Total 100% | 36.1 MiB/s | 2.1 MiB | 00m00s Running transaction [1/4] Verify package files 100% | 285.0 B/s | 2.0 B | 00m00s [2/4] Prepare transaction 100% | 95.0 B/s | 2.0 B | 00m00s [3/4] Installing python3-wheel-1:0.44.0 100% | 75.4 MiB/s | 540.6 KiB | 00m00s [4/4] Installing python3-setuptools-0:7 100% | 118.9 MiB/s | 8.6 MiB | 00m00s Complete! Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1732492800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.7asL3w + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement satisfied: h5py>=2.9.0 (installed: h5py 3.12.1) Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement satisfied: pytest>=6.0 (installed: pytest 8.3.4) Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 1.26.4) Handling setuptools>=24.2.0 from build-system.requires Requirement satisfied: setuptools>=24.2.0 (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.44.0) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling setuptools_scm from get_requires_for_build_wheel Requirement not satisfied: setuptools_scm Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/morphio-3.4.0-7.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: Copr repository 100% | 40.5 KiB/s | 1.5 KiB | 00m00s fedora 100% | 150.0 KiB/s | 14.0 KiB | 00m00s Repositories loaded. Package "boost-devel-1.83.0-9.fc42.aarch64" is already installed. Package "cmake-3.31.2-1.fc42.aarch64" is already installed. Package "catch2-devel-2.13.10-5.fc42.aarch64" is already installed. Package "gulrak-filesystem-devel-1.5.14-9.fc42.aarch64" is already installed. Package "gsl-lite-devel-0.42.0-1.fc42.aarch64" is already installed. Package "highfive-devel-2.10.0-2.fc42.aarch64" is already installed. Package "pybind11-devel-2.13.6-1.fc42.aarch64" is already installed. Package "gcc-c++-14.2.1-6.fc42.aarch64" is already installed. Package "gsl-lite-devel-0.42.0-1.fc42.aarch64" is already installed. Package "gulrak-filesystem-devel-1.5.14-9.fc42.aarch64" is already installed. Package "hdf5-devel-1.14.5-1.fc42.aarch64" is already installed. Package "highfive-devel-2.10.0-2.fc42.aarch64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-3.fc42.aarch64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-3.fc42.aarch64" is already installed. Package "ninja-build-1.12.1-3.fc41.aarch64" is already installed. Package "pybind11-devel-2.13.6-1.fc42.aarch64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.aarch64" is already installed. Package "python3-h5py-3.12.1-3.fc42.aarch64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.aarch64" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package Arch Version Repository Size Installing: python3-setuptools_scm noarch 8.1.0-1.fc42 fedora 320.0 KiB Transaction Summary: Installing: 1 package Package "python3-setuptools-74.1.3-4.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-4.fc42.noarch" is already installed. Package "python3-wheel-1:0.44.0-1.fc42.noarch" is already installed. Package "tomcli-0.8.0-1.fc42.noarch" is already installed. Total size of inbound packages is 117 KiB. Need to download 117 KiB. After this operation, 320 KiB extra will be used (install 320 KiB, remove 0 B). [1/1] python3-setuptools_scm-0:8.1.0-1. 100% | 11.4 MiB/s | 117.0 KiB | 00m00s -------------------------------------------------------------------------------- [1/1] Total 100% | 3.1 MiB/s | 117.0 KiB | 00m00s Running transaction [1/3] Verify package files 100% | 0.0 B/s | 1.0 B | 00m00s [2/3] Prepare transaction 100% | 90.0 B/s | 1.0 B | 00m00s [3/3] Installing python3-setuptools_scm 100% | 16.6 MiB/s | 339.7 KiB | 00m00s Complete! Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1732492800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Q2ta7D + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement satisfied: h5py>=2.9.0 (installed: h5py 3.12.1) Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement satisfied: pytest>=6.0 (installed: pytest 8.3.4) Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 1.26.4) Handling setuptools>=24.2.0 from build-system.requires Requirement satisfied: setuptools>=24.2.0 (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.44.0) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling setuptools_scm from get_requires_for_build_wheel Requirement satisfied: setuptools_scm (installed: setuptools_scm 8.1.0) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info creating morphio.egg-info writing morphio.egg-info/PKG-INFO writing dependency_links to morphio.egg-info/dependency_links.txt writing requirements to morphio.egg-info/requires.txt writing top-level names to morphio.egg-info/top_level.txt writing manifest file 'morphio.egg-info/SOURCES.txt' reading manifest file 'morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'morphio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/morphio-3.4.0.dist-info' Handling numpy>=1.14.1 from hook generated metadata: Requires-Dist (morphio) Requirement satisfied: numpy>=1.14.1 (installed: numpy 1.26.4) Handling sphinx-bluebrain-theme; extra == "docs" from hook generated metadata: Requires-Dist (morphio) Ignoring alien requirement: sphinx-bluebrain-theme; extra == "docs" + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires + rm -rfv morphio-3.4.0.dist-info/ removed 'morphio-3.4.0.dist-info/top_level.txt' removed 'morphio-3.4.0.dist-info/METADATA' removed 'morphio-3.4.0.dist-info/LICENSE.txt' removed 'morphio-3.4.0.dist-info/AUTHORS.txt' removed directory 'morphio-3.4.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/morphio-3.4.0-7.fc42.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires Updating and loading repositories: fedora 100% | 465.1 KiB/s | 14.0 KiB | 00m00s Copr repository 100% | 8.2 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "boost-devel-1.83.0-9.fc42.aarch64" is already installed. Package "cmake-3.31.2-1.fc42.aarch64" is already installed. Package "catch2-devel-2.13.10-5.fc42.aarch64" is already installed. Package "gulrak-filesystem-devel-1.5.14-9.fc42.aarch64" is already installed. Package "gsl-lite-devel-0.42.0-1.fc42.aarch64" is already installed. Package "highfive-devel-2.10.0-2.fc42.aarch64" is already installed. Package "pybind11-devel-2.13.6-1.fc42.aarch64" is already installed. Package "gcc-c++-14.2.1-6.fc42.aarch64" is already installed. Package "gsl-lite-devel-0.42.0-1.fc42.aarch64" is already installed. Package "gulrak-filesystem-devel-1.5.14-9.fc42.aarch64" is already installed. Package "hdf5-devel-1.14.5-1.fc42.aarch64" is already installed. Package "highfive-devel-2.10.0-2.fc42.aarch64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-3.fc42.aarch64" is already installed. Package "lexertl14-devel-1:0.1.0^20240506gitbca1359-3.fc42.aarch64" is already installed. Package "ninja-build-1.12.1-3.fc41.aarch64" is already installed. Package "pybind11-devel-2.13.6-1.fc42.aarch64" is already installed. Package "pyproject-rpm-macros-1.16.3-1.fc42.noarch" is already installed. Package "python3-devel-3.13.1-2.fc42.aarch64" is already installed. Package "python3-h5py-3.12.1-3.fc42.aarch64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.aarch64" is already installed. Package "python3-numpy-1:1.26.4-8.fc41.aarch64" is already installed. Package "python3-packaging-24.2-2.fc42.noarch" is already installed. Package "python3-pip-24.3.1-1.fc42.noarch" is already installed. Package "python3-pytest-8.3.4-1.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-4.fc42.noarch" is already installed. Package "python3-setuptools-74.1.3-4.fc42.noarch" is already installed. Package "python3-setuptools_scm-8.1.0-1.fc42.noarch" is already installed. Package "python3-wheel-1:0.44.0-1.fc42.noarch" is already installed. Package "tomcli-0.8.0-1.fc42.noarch" is already installed. Nothing to do. Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1732492800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.iD4kg0 + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(packaging)' + echo 'python3dist(pip) >= 19' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires tests/requirement_tests.txt Handling h5py>=2.9.0 from requirements file tests/requirement_tests.txt Requirement satisfied: h5py>=2.9.0 (installed: h5py 3.12.1) Handling pytest>=6.0 from requirements file tests/requirement_tests.txt Requirement satisfied: pytest>=6.0 (installed: pytest 8.3.4) Handling numpy>=1.14.2 from requirements file tests/requirement_tests.txt Requirement satisfied: numpy>=1.14.2 (installed: numpy 1.26.4) Handling setuptools>=24.2.0 from build-system.requires Requirement satisfied: setuptools>=24.2.0 (installed: setuptools 74.1.3) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.44.0) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 74.1.3) Handling setuptools_scm from get_requires_for_build_wheel Requirement satisfied: setuptools_scm (installed: setuptools_scm 8.1.0) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info writing morphio.egg-info/PKG-INFO writing dependency_links to morphio.egg-info/dependency_links.txt writing requirements to morphio.egg-info/requires.txt writing top-level names to morphio.egg-info/top_level.txt reading manifest file 'morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'morphio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/morphio-3.4.0.dist-info' Handling numpy>=1.14.1 from hook generated metadata: Requires-Dist (morphio) Requirement satisfied: numpy>=1.14.1 (installed: numpy 1.26.4) Handling sphinx-bluebrain-theme; extra == "docs" from hook generated metadata: Requires-Dist (morphio) Ignoring alien requirement: sphinx-bluebrain-theme; extra == "docs" + cat /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-buildrequires + rm -rfv morphio-3.4.0.dist-info/ removed 'morphio-3.4.0.dist-info/top_level.txt' removed 'morphio-3.4.0.dist-info/METADATA' removed 'morphio-3.4.0.dist-info/LICENSE.txt' removed 'morphio-3.4.0.dist-info/AUTHORS.txt' removed directory 'morphio-3.4.0.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ehBlM7 + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.4.0 + export SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + SETUPTOOLS_SCM_PRETEND_VERSION=3.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_BINDINGS:BOOL=FALSE -DEXTERNAL_CATCH2:BOOL=TRUE -DEXTERNAL_GHC_FILESYSTEM:BOOL=TRUE -DEXTERNAL_HIGHFIVE:BOOL=TRUE -DEXTERNAL_PYBIND11:BOOL=TRUE -DMORPHIO_ENABLE_COVERAGE:BOOL=FALSE -DMORPHIO_TESTS:BOOL=TRUE -DMORPHIO_USE_DOUBLE:BOOL=TRUE -DMORPHIO_VERSION_STRING:STRING=3.4.0 -DMorphIO_CXX_WARNINGS:BOOL=FALSE -GNinja -Wno-dev -- The C compiler identification is GNU 14.2.1 -- The CXX compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Floating Point Type: double -- HIGHFIVE 2.10.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO) -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.14.5") -- Found Boost: /usr/include (found version "1.83.0") found components: system serialization -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13.1", minimum required is "3.7") -- Found PythonLibs: /usr/lib64/libpython3.13.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.13.6") -- Configuring done (1.4s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build' Run Build Command(s): /usr/bin/ninja-build -v -j 4 [1/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/enums.cpp.o -MF src/CMakeFiles/morphio_obj.dir/enums.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/enums.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/enums.cpp [2/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -MF src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/endoplasmic_reticulum.cpp [3/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o -MF src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/errorMessages.cpp [4/55] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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tests/CMakeFiles/unittests.dir/main.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/tests/main.cpp [55/55] : && /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -rdynamic -Wl,--dependency-file=tests/CMakeFiles/unittests.dir/link.d tests/CMakeFiles/unittests.dir/main.cpp.o tests/CMakeFiles/unittests.dir/test_collection.cpp.o tests/CMakeFiles/unittests.dir/test_enums.cpp.o tests/CMakeFiles/unittests.dir/test_immutable_morphology.cpp.o tests/CMakeFiles/unittests.dir/test_mitochondria.cpp.o tests/CMakeFiles/unittests.dir/test_morphology_readers.cpp.o tests/CMakeFiles/unittests.dir/test_mutable_morphology.cpp.o tests/CMakeFiles/unittests.dir/test_point_utils.cpp.o tests/CMakeFiles/unittests.dir/test_properties.cpp.o tests/CMakeFiles/unittests.dir/test_soma.cpp.o tests/CMakeFiles/unittests.dir/test_swc_reader.cpp.o tests/CMakeFiles/unittests.dir/test_utilities.cpp.o tests/CMakeFiles/unittests.dir/test_vasculature_morphology.cpp.o -o /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/bin/unittests src/libmorphio_static.a -lstdc++fs -lhdf5 && : + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_VERBOSE_MAKEFILE:BOOL=ON + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_VERBOSE_MAKEFILE:BOOL=ON,CMAKE_INSTALL_DO_STRIP:BOOL=OFF + mcd=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_VERBOSE_MAKEFILE:BOOL=ON,CMAKE_INSTALL_DO_STRIP:BOOL=OFF,CMAKE_STRIP=/bin/true + export MORPHIO_CMAKE_DEFS=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_VERBOSE_MAKEFILE:BOOL=ON,CMAKE_INSTALL_DO_STRIP:BOOL=OFF,CMAKE_STRIP=/bin/true + MORPHIO_CMAKE_DEFS=EXTERNAL_GHC_FILESYSTEM:BOOL=TRUE,MORPHIO_USE_DOUBLE:BOOL=TRUE,MorphIO_CXX_WARNINGS:BOOL=FALSE,EXTERNAL_HIGHFIVE:BOOL=TRUE,EXTERNAL_PYBIND11:BOOL=TRUE,CMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG,CMAKE_VERBOSE_MAKEFILE:BOOL=ON,CMAKE_INSTALL_DO_STRIP:BOOL=OFF,CMAKE_STRIP=/bin/true + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + VALAFLAGS=-g + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LT_SYS_LIBRARY_PATH=/usr/lib64: + CC=gcc + CXX=g++ + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir Processing /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running dist_info creating /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio.egg-info writing /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-modern-metadata-60ssfxon/morphio-3.4.0.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: morphio Building wheel for morphio (pyproject.toml): started Running command Building wheel for morphio (pyproject.toml) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/usr/lib/python3.13/site-packages/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running bdist_wheel running build running build_py creating build creating build/lib.linux-aarch64-cpython-313 creating build/lib.linux-aarch64-cpython-313/morphio copying morphio/__init__.py -> build/lib.linux-aarch64-cpython-313/morphio creating build/lib.linux-aarch64-cpython-313/morphio/mut copying morphio/mut/__init__.py -> build/lib.linux-aarch64-cpython-313/morphio/mut creating build/lib.linux-aarch64-cpython-313/morphio/vasculature copying morphio/vasculature/__init__.py -> build/lib.linux-aarch64-cpython-313/morphio/vasculature running build_ext CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The C compiler identification is GNU 14.2.1 -- The CXX compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Floating Point Type: double -- HIGHFIVE 2.10.0: (Re)Detecting Highfive dependencies (HIGHFIVE_USE_INSTALL_DEPS=NO) -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.14.5") CMake Warning (dev) at /usr/lib64/cmake/HighFive/HighFiveTargetDeps.cmake:55 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/lib64/cmake/HighFive/HighFiveConfig.cmake:93 (include) CMakeLists.txt:42 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/include (found version "1.83.0") found components: system serialization CMake Warning (dev) at /usr/share/cmake/pybind11/FindPythonLibsNew.cmake:101 (message): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning, or preferably upgrade to using FindPython, either by calling it explicitly before pybind11, or by setting PYBIND11_FINDPYTHON ON before pybind11. Call Stack (most recent call first): /usr/share/cmake/pybind11/pybind11Tools.cmake:50 (find_package) /usr/share/cmake/pybind11/pybind11Common.cmake:228 (include) /usr/share/cmake/pybind11/pybind11Config.cmake:250 (include) CMakeLists.txt:45 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.13.1", minimum required is "3.7") -- Found PythonLibs: /usr/lib64/libpython3.13.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.13.6") -- Warning: this does not have an effect - use NO_SYSTEM_FROM_IMPORTED if using imported targets -- Found Python3: /usr/bin/python3.13 (found version "3.13.1") found components: Interpreter -- Configuring done (1.6s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP HIGHFIVE_EXAMPLES HIGHFIVE_UNIT_TESTS -- Build files have been written to: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/temp.linux-aarch64-cpython-313 Change Dir: '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/temp.linux-aarch64-cpython-313' Run Build Command(s): /usr/bin/ninja-build -v _morphio [1/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/enums.cpp.o -MF src/CMakeFiles/morphio_obj.dir/enums.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/enums.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/enums.cpp [2/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -MF src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/endoplasmic_reticulum.cpp [3/48] /usr/bin/g++ 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-I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 -I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/warning_handling.cpp.o -MF src/CMakeFiles/morphio_obj.dir/warning_handling.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/warning_handling.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/warning_handling.cpp [38/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE 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-I/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/../include -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/3rdparty/lexertl14/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++14 -fPIC -MD -MT src/CMakeFiles/morphio_obj.dir/readers/morphologyASC.cpp.o -MF src/CMakeFiles/morphio_obj.dir/readers/morphologyASC.cpp.o.d -o src/CMakeFiles/morphio_obj.dir/readers/morphologyASC.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/src/readers/morphologyASC.cpp [40/48] : && /usr/bin/cmake -E rm -f src/libmorphio_static.a && /usr/bin/ar qc src/libmorphio_static.a src/CMakeFiles/morphio_obj.dir/collection.cpp.o src/CMakeFiles/morphio_obj.dir/dendritic_spine.cpp.o src/CMakeFiles/morphio_obj.dir/endoplasmic_reticulum.cpp.o src/CMakeFiles/morphio_obj.dir/enums.cpp.o src/CMakeFiles/morphio_obj.dir/errorMessages.cpp.o src/CMakeFiles/morphio_obj.dir/error_message_generation.cpp.o src/CMakeFiles/morphio_obj.dir/glial_cell.cpp.o src/CMakeFiles/morphio_obj.dir/mito_section.cpp.o src/CMakeFiles/morphio_obj.dir/mitochondria.cpp.o src/CMakeFiles/morphio_obj.dir/morphology.cpp.o src/CMakeFiles/morphio_obj.dir/mut/dendritic_spine.cpp.o src/CMakeFiles/morphio_obj.dir/mut/endoplasmic_reticulum.cpp.o src/CMakeFiles/morphio_obj.dir/mut/glial_cell.cpp.o src/CMakeFiles/morphio_obj.dir/mut/mito_section.cpp.o src/CMakeFiles/morphio_obj.dir/mut/mitochondria.cpp.o src/CMakeFiles/morphio_obj.dir/mut/modifiers.cpp.o src/CMakeFiles/morphio_obj.dir/mut/morphology.cpp.o src/CMakeFiles/morphio_obj.dir/mut/section.cpp.o src/CMakeFiles/morphio_obj.dir/mut/soma.cpp.o src/CMakeFiles/morphio_obj.dir/mut/writer_asc.cpp.o src/CMakeFiles/morphio_obj.dir/mut/writer_hdf5.cpp.o src/CMakeFiles/morphio_obj.dir/mut/writer_swc.cpp.o src/CMakeFiles/morphio_obj.dir/mut/writer_utils.cpp.o src/CMakeFiles/morphio_obj.dir/point_utils.cpp.o src/CMakeFiles/morphio_obj.dir/properties.cpp.o src/CMakeFiles/morphio_obj.dir/readers/morphologyASC.cpp.o src/CMakeFiles/morphio_obj.dir/readers/morphologyHDF5.cpp.o src/CMakeFiles/morphio_obj.dir/readers/morphologySWC.cpp.o src/CMakeFiles/morphio_obj.dir/readers/utils.cpp.o src/CMakeFiles/morphio_obj.dir/readers/vasculatureHDF5.cpp.o src/CMakeFiles/morphio_obj.dir/section.cpp.o src/CMakeFiles/morphio_obj.dir/shared_utils.cpp.o src/CMakeFiles/morphio_obj.dir/soma.cpp.o src/CMakeFiles/morphio_obj.dir/vasc/properties.cpp.o src/CMakeFiles/morphio_obj.dir/vasc/section.cpp.o src/CMakeFiles/morphio_obj.dir/vasc/vasculature.cpp.o src/CMakeFiles/morphio_obj.dir/version.cpp.o src/CMakeFiles/morphio_obj.dir/warning_handling.cpp.o && /usr/bin/ranlib src/libmorphio_static.a && : [41/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_enums.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_enums.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_enums.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_enums.cpp [42/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_vasculature.cpp [43/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_misc.cpp [44/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bindings_utils.cpp [45/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_immutable.cpp [46/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_warnings_exceptions.cpp [47/48] /usr/bin/g++ -DMORPHIO_USE_DOUBLE -D_morphio_EXPORTS -isystem /usr/include/python3.13 -isystem /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o -MF binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o.d -o binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o -c /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/binds/python/bind_mutable.cpp [48/48] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -flto -Wl,--dependency-file=binds/python/CMakeFiles/_morphio.dir/link.d -shared -o /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/lib.linux-aarch64-cpython-313/morphio/_morphio.cpython-313-aarch64-linux-gnu.so binds/python/CMakeFiles/_morphio.dir/morphio.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_enums.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_immutable.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_misc.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_mutable.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_vasculature.cpp.o binds/python/CMakeFiles/_morphio.dir/bind_warnings_exceptions.cpp.o binds/python/CMakeFiles/_morphio.dir/bindings_utils.cpp.o src/libmorphio_static.a -lhdf5 && cd /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/temp.linux-aarch64-cpython-313/binds/python && /bin/true /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/build/lib.linux-aarch64-cpython-313/morphio/_morphio.cpython-313-aarch64-linux-gnu.so installing to build/bdist.linux-aarch64/wheel running install running install_lib creating build/bdist.linux-aarch64 creating build/bdist.linux-aarch64/wheel creating build/bdist.linux-aarch64/wheel/morphio copying build/lib.linux-aarch64-cpython-313/morphio/__init__.py -> build/bdist.linux-aarch64/wheel/./morphio creating build/bdist.linux-aarch64/wheel/morphio/mut copying build/lib.linux-aarch64-cpython-313/morphio/mut/__init__.py -> build/bdist.linux-aarch64/wheel/./morphio/mut creating build/bdist.linux-aarch64/wheel/morphio/vasculature copying build/lib.linux-aarch64-cpython-313/morphio/vasculature/__init__.py -> build/bdist.linux-aarch64/wheel/./morphio/vasculature copying build/lib.linux-aarch64-cpython-313/morphio/_morphio.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./morphio running install_egg_info running egg_info writing morphio.egg-info/PKG-INFO writing dependency_links to morphio.egg-info/dependency_links.txt writing requirements to morphio.egg-info/requires.txt writing top-level names to morphio.egg-info/top_level.txt reading manifest file 'morphio.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '3rdparty/HighFive/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/HighFive/include' warning: no files found matching '*' under directory '3rdparty/HighFive/CMake' warning: no files found matching '*' under directory '3rdparty/HighFive/doc' warning: no files found matching '3rdparty/lexertl14/CMakeLists.txt' warning: no files found matching '*' under directory '3rdparty/lexertl14/include/lexertl' warning: no files found matching '*' under directory 'binds/python/pybind11/include' warning: no files found matching '*.cmake' under directory 'binds/python/pybind11/tools' warning: no files found matching 'binds/python/pybind11/CMakeLists.txt' warning: no files found matching 'binds/python/pybind11/LICENSE' no previously-included directories found matching 'ci' no previously-included directories found matching 'doc' no previously-included directories found matching 'scripts' no previously-included directories found matching 'examples' adding license file 'LICENSE.txt' adding license file 'AUTHORS.txt' writing manifest file 'morphio.egg-info/SOURCES.txt' Copying morphio.egg-info to build/bdist.linux-aarch64/wheel/./morphio-3.4.0-py3.13.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/morphio-3.4.0.dist-info/WHEEL creating '/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir/pip-wheel-qz3uxaud/.tmp-tq25263j/morphio-3.4.0-cp313-cp313-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'morphio/__init__.py' adding 'morphio/_morphio.cpython-313-aarch64-linux-gnu.so' adding 'morphio/mut/__init__.py' adding 'morphio/vasculature/__init__.py' adding 'morphio-3.4.0.dist-info/AUTHORS.txt' adding 'morphio-3.4.0.dist-info/LICENSE.txt' adding 'morphio-3.4.0.dist-info/METADATA' adding 'morphio-3.4.0.dist-info/WHEEL' adding 'morphio-3.4.0.dist-info/top_level.txt' adding 'morphio-3.4.0.dist-info/RECORD' removing build/bdist.linux-aarch64/wheel Building wheel for morphio (pyproject.toml): finished with status 'done' Created wheel for morphio: filename=morphio-3.4.0-cp313-cp313-linux_aarch64.whl size=13546070 sha256=e3fa8545a3fd916d3e952fb7474634b773acbf5a641f22a6f5ed36773a0a639c Stored in directory: /builddir/.cache/pip/wheels/ee/c3/10/370becb4d63347b21ed8b192db03b5bd7c455f6dcc44ad4816 Successfully built morphio + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.xSRF1e + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + '[' /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/morphio-3.4.0-build + mkdir /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.4.0 + DESTDIR=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "" -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/collection.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/dendritic_spine.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/endoplasmic_reticulum.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/enums.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/errorMessages.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/exceptions.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/glial_cell.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mito_section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mitochondria.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/morphology.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/dendritic_spine.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/endoplasmic_reticulum.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/glial_cell.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/mito_section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/mitochondria.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/modifiers.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/morphology.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/soma.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/mut/writers.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/properties.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/section_base.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/section_iterators.hpp -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/soma.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/types.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc/iterators.hpp -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc/properties.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc/section.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vasc/vasculature.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/vector_types.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/version.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/include/morphio/warning_handling.h -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/cmake/MorphIO/MorphIOTargets.cmake -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/cmake/MorphIO/MorphIOTargets-noconfig.cmake -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/cmake/MorphIO/MorphIOConfig.cmake -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/libmorphio.so.0.0.0 -- Installing: /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/libmorphio.so ++ ls /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir/morphio-3.4.0-cp313-cp313-linux_aarch64.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=morphio==3.4.0 + '[' -z morphio==3.4.0 ']' + TMPDIR=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir morphio==3.4.0 Using pip 24.3.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/pyproject-wheeldir Processing ./pyproject-wheeldir/morphio-3.4.0-cp313-cp313-linux_aarch64.whl Installing collected packages: morphio Successfully installed morphio-3.4.0 + '[' -d /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/bin ']' + rm -f /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + site_dirs+=("/usr/lib64/python3.13/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT --record /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/RECORD --output /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-record + rm -fv /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/RECORD removed '/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/RECORD' + rm -fv /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/REQUESTED removed '/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio-3.4.0.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-files --output-modules /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-modules --buildroot /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/morphio-3.4.0-build/morphio-3.4.0-7.fc42.aarch64-pyproject-record --prefix /usr -l morphio + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.4.0-7.fc42 --unique-debug-suffix -3.4.0-7.fc42.aarch64 --unique-debug-src-base morphio-3.4.0-7.fc42.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 find-debuginfo: starting Extracting debug info from 2 files DWARF-compressing 2 files sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/morphio-3.4.0-7.fc42.aarch64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio/mut/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio/vasculature/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages/morphio/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents Scanned 43 directories and 154 files, processed 3 inodes, 3 modified (0 replaced + 3 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/morphio-3.4.0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.rPm87p + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd MorphIO-3.4.0 + /usr/bin/ctest --test-dir redhat-linux-build --output-on-failure --force-new-ctest-process -j4 -VV Internal ctest changing into directory: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build UpdateCTestConfiguration from :/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build/DartConfiguration.tcl Test project /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/redhat-linux-build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: unittests 1: Test command: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/bin/unittests 1: Working Directory: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/tests 1: Test timeout computed to be: 10000000 1: 1: $STRING$:2:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:2:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:2:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:2:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:4:warning 1: Warning: found a disconnected neurite. 1: Neurites are not supposed to have parentId: -1 1: (although this is normal if this neuron has no soma) 1: 1: $STRING$:0:warning 1: Warning: no soma found in file 1: 1: $STRING$:3:warning 1: Warning: Type changed within section, without bifurcation 1: 1: $STRING$:4:warning 1: Warning: Type changed within section, without bifurcation 1: 1: $STRING$:5:warning 1: Warning: Type changed within section, without bifurcation 1: 1: data/single_point_root.asc:0:warning 1: Warning: no soma found in file 1: 1: Warning: section 1 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: section 2 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: section 3 is the only child of section: 0 1: It will be merged with the parent section 1: 1: Warning: Skipping an attempt to write an empty morphology. 1: 1: Warning: writing file without a soma 1: 1: Warning: writing soma set to SOMA_UNDEFINED 1: 1: Soma must be stacked cylinders or a point: see https://github.com/BlueBrain/MorphIO/issues/457 1: 1: Three Point Soma: Only one column has the same coordinates. 1: 1: data/h5/v1/Neuron-no-soma.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/single-neurite.h5:0:warning 1: Warning: no soma found in file 1: Skipping LoadSWCMorphologyLocale because `std::locale` failed. 1: 1: data/markers.asc:0:warning 1: Warning: no soma found in file 1: 1: data/annotations.asc:0:warning 1: Warning: no soma found in file 1: 1: Warning: section 1 is the only child of section: 0 1: It will be merged with the parent section 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: Warning: while appending section: 2 to parent: 1 1: The section first point should be parent section last point: 1: : X Y Z Diameter 1: parent last point :[0.000000, 15.900000, 0.000000, 2.400000] 1: child first point :[0.000000, 13.200000, 0.000000, 2.300000] 1: 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: data/h5/v1/simple-dendritric-spine.h5:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: 1: HDF5 GROUP:0:warning 1: Warning: no soma found in file 1: =============================================================================== 1: All tests passed (469 assertions in 60 test cases) 1: 1/1 Test #1: unittests ........................ Passed 0.06 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.06 sec ++ basename /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 + xdir=MorphIO-3.4.0 + cd .. + k='not test_v2' + k='not test_v2 and not test_neurolucida_markers' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read' + k='not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read and not test_dendritic_spine_round_trip_empty_postsynaptic_density' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest MorphIO-3.4.0/tests -k 'not test_v2 and not test_neurolucida_markers and not test_marker_with_string and not test_mitochondria and not test_mitochondria_read and not test_dendritic_spine_round_trip_empty_postsynaptic_density' -v ============================= test session starts ============================== platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0 configfile: pyproject.toml collecting ... collected 171 items / 8 deselected / 163 selected MorphIO-3.4.0/tests/test_0_API.py::test_doc_exists PASSED [ 0%] MorphIO-3.4.0/tests/test_0_API.py::test_mut_immut_have_same_methods PASSED [ 1%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_empty_vasculature PASSED [ 1%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_components_vasculature PASSED [ 2%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_section_types PASSED [ 3%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_section_offsets PASSED [ 3%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_section_connectivity PASSED [ 4%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_iterators_vasculature PASSED [ 4%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_from_pathlib PASSED [ 5%] MorphIO-3.4.0/tests/test_10_vasculature.py::test_section___str__ PASSED [ 6%] MorphIO-3.4.0/tests/test_11_collection.py::test_load_from_collection_with_context[collection_path0] PASSED [ 6%] MorphIO-3.4.0/tests/test_11_collection.py::test_load_from_collection_with_context[collection_path1] PASSED [ 7%] MorphIO-3.4.0/tests/test_11_collection.py::test_load_from_collection_without_context[collection_path0] PASSED [ 7%] MorphIO-3.4.0/tests/test_11_collection.py::test_load_from_collection_without_context[collection_path1] PASSED [ 8%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_unordered[collection_path0] PASSED [ 9%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_unordered[collection_path1] PASSED [ 9%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_unordered1[collection_path0] PASSED [ 10%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_unordered1[collection_path1] PASSED [ 11%] MorphIO-3.4.0/tests/test_11_collection.py::test_container_with_warning_handler PASSED [ 11%] MorphIO-3.4.0/tests/test_1_swc.py::test_basic PASSED [ 12%] MorphIO-3.4.0/tests/test_1_swc.py::test_build_from_string PASSED [ 12%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_single_neurite PASSED [ 13%] MorphIO-3.4.0/tests/test_1_swc.py::test_skip_comments PASSED [ 14%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_simple PASSED [ 14%] MorphIO-3.4.0/tests/test_1_swc.py::test_set_raise_warnings PASSED [ 15%] MorphIO-3.4.0/tests/test_1_swc.py::test_repeated_id PASSED [ 15%] MorphIO-3.4.0/tests/test_1_swc.py::test_neurite_followed_by_soma PASSED [ 16%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_split_soma PASSED [ 17%] MorphIO-3.4.0/tests/test_1_swc.py::test_weird_indent PASSED [ 17%] MorphIO-3.4.0/tests/test_1_swc.py::test_cyclic PASSED [ 18%] MorphIO-3.4.0/tests/test_1_swc.py::test_simple_reversed PASSED [ 19%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_1_point PASSED [ 19%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_2_point PASSED [ 20%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_many_point PASSED [ 20%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_3_point_neuromorpho PASSED [ 21%] MorphIO-3.4.0/tests/test_1_swc.py::test_soma_type_3_point PASSED [ 22%] MorphIO-3.4.0/tests/test_1_swc.py::test_swc_threepoint_soma_tolerance PASSED [ 22%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_weird_ids PASSED [ 23%] MorphIO-3.4.0/tests/test_1_swc.py::test_multiple_soma PASSED [ 23%] MorphIO-3.4.0/tests/test_1_swc.py::test_disconnected_neurite PASSED [ 24%] MorphIO-3.4.0/tests/test_1_swc.py::test_neurite_wrong_root_point_neuromorpho_3_point_soma PASSED [ 25%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_duplicate PASSED [ 25%] MorphIO-3.4.0/tests/test_1_swc.py::test_unsupported_section_type PASSED [ 26%] MorphIO-3.4.0/tests/test_1_swc.py::test_three_point_soma_neuromorpho PASSED [ 26%] MorphIO-3.4.0/tests/test_1_swc.py::test_three_point_soma_stacked_cylinders PASSED [ 27%] MorphIO-3.4.0/tests/test_1_swc.py::test_trailing_space PASSED [ 28%] MorphIO-3.4.0/tests/test_1_swc.py::test_zero_diameter PASSED [ 28%] MorphIO-3.4.0/tests/test_1_swc.py::test_version PASSED [ 29%] MorphIO-3.4.0/tests/test_1_swc.py::test_no_soma PASSED [ 30%] MorphIO-3.4.0/tests/test_1_swc.py::test_throw_on_missing_data PASSED [ 30%] MorphIO-3.4.0/tests/test_1_swc.py::test_throw_on_negative_id PASSED [ 31%] MorphIO-3.4.0/tests/test_1_swc.py::test_axon_carrying_dendrite PASSED [ 31%] MorphIO-3.4.0/tests/test_1_swc.py::test_multi_type_section PASSED [ 32%] MorphIO-3.4.0/tests/test_1_swc.py::test_missing_parent PASSED [ 33%] MorphIO-3.4.0/tests/test_1_swc.py::test_extra_column PASSED [ 33%] MorphIO-3.4.0/tests/test_1_swc.py::test_read_simple_windows_eol PASSED [ 34%] MorphIO-3.4.0/tests/test_1_swc.py::test_WarningHandlerCollector PASSED [ 34%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_soma PASSED [ 35%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_parse_number_with_plus_symbol PASSED [ 36%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_unknown_token PASSED [ 36%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_unfinished_point PASSED [ 37%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_multiple_soma PASSED [ 38%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_single_neurite_no_soma PASSED [ 38%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_skip_header PASSED [ 39%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_read_with_duplicates PASSED [ 39%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_read_without_duplicates PASSED [ 40%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_explicit_duplicates_with_arbitrary_diameter PASSED [ 41%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_unfinished_file PASSED [ 41%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_section_single_point PASSED [ 42%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_single_children PASSED [ 42%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_spine PASSED [ 43%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_single_point_section_duplicate_parent PASSED [ 44%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_single_point_section_duplicate_parent_complex PASSED [ 44%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_spine1 PASSED [ 45%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_markers PASSED [ 46%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_string_markers PASSED [ 46%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_invalid_incomplete PASSED [ 47%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_skip_font PASSED [ 47%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_skip_imagecoord PASSED [ 48%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_Sections_block PASSED [ 49%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_version PASSED [ 49%] MorphIO-3.4.0/tests/test_2_neurolucida.py::test_load_from_string PASSED [ 50%] MorphIO-3.4.0/tests/test_3_h5.py::test_v1 PASSED [ 50%] MorphIO-3.4.0/tests/test_3_h5.py::test_wrong_section_type PASSED [ 51%] MorphIO-3.4.0/tests/test_3_h5.py::test_soma_no_neurite PASSED [ 52%] MorphIO-3.4.0/tests/test_3_h5.py::test_single_children PASSED [ 52%] MorphIO-3.4.0/tests/test_4_immut.py::test_heterogeneous_sections PASSED [ 53%] MorphIO-3.4.0/tests/test_4_immut.py::test_components PASSED [ 53%] MorphIO-3.4.0/tests/test_4_immut.py::test_is_root PASSED [ 54%] MorphIO-3.4.0/tests/test_4_immut.py::test_distance PASSED [ 55%] MorphIO-3.4.0/tests/test_4_immut.py::test_iter PASSED [ 55%] MorphIO-3.4.0/tests/test_4_immut.py::test_section_offsets PASSED [ 56%] MorphIO-3.4.0/tests/test_4_immut.py::test_connectivity PASSED [ 57%] MorphIO-3.4.0/tests/test_4_immut.py::test_endoplasmic_reticulum PASSED [ 57%] MorphIO-3.4.0/tests/test_4_immut.py::test_section___str__ PASSED [ 58%] MorphIO-3.4.0/tests/test_4_immut.py::test_section_has_same_shape PASSED [ 58%] MorphIO-3.4.0/tests/test_4_immut.py::test_from_pathlib PASSED [ 59%] MorphIO-3.4.0/tests/test_4_immut.py::test_more_iter PASSED [ 60%] MorphIO-3.4.0/tests/test_4_immut.py::test_glia PASSED [ 60%] MorphIO-3.4.0/tests/test_4_immut.py::test_dendritic_spine PASSED [ 61%] MorphIO-3.4.0/tests/test_4_immut.py::test_dendritic_spine_add_root_section PASSED [ 61%] MorphIO-3.4.0/tests/test_5_mut.py::test_heterogeneous_sections PASSED [ 62%] MorphIO-3.4.0/tests/test_5_mut.py::test_point_level PASSED [ 63%] MorphIO-3.4.0/tests/test_5_mut.py::test_connectivity PASSED [ 63%] MorphIO-3.4.0/tests/test_5_mut.py::test_empty_neurite PASSED [ 64%] MorphIO-3.4.0/tests/test_5_mut.py::test_single_neurite PASSED [ 65%] MorphIO-3.4.0/tests/test_5_mut.py::test_child_section PASSED [ 65%] MorphIO-3.4.0/tests/test_5_mut.py::test_append_no_duplicate PASSED [ 66%] MorphIO-3.4.0/tests/test_5_mut.py::test_mut_copy_ctor PASSED [ 66%] MorphIO-3.4.0/tests/test_5_mut.py::test_build_read_only PASSED [ 67%] MorphIO-3.4.0/tests/test_5_mut.py::test_mutable_immutable_equivalence PASSED [ 68%] MorphIO-3.4.0/tests/test_5_mut.py::test_sections_are_not_dereferenced PASSED [ 68%] MorphIO-3.4.0/tests/test_5_mut.py::test_append_mutable_section PASSED [ 69%] MorphIO-3.4.0/tests/test_5_mut.py::test_iterators PASSED [ 69%] MorphIO-3.4.0/tests/test_5_mut.py::test_non_C_nparray PASSED [ 70%] MorphIO-3.4.0/tests/test_5_mut.py::test_annotation PASSED [ 71%] MorphIO-3.4.0/tests/test_5_mut.py::test_empty_sibling PASSED [ 71%] MorphIO-3.4.0/tests/test_5_mut.py::test_nested_single_child PASSED [ 72%] MorphIO-3.4.0/tests/test_5_mut.py::test_section___str__ PASSED [ 73%] MorphIO-3.4.0/tests/test_5_mut.py::test_from_pathlib PASSED [ 73%] MorphIO-3.4.0/tests/test_5_mut.py::test_endoplasmic_reticulum PASSED [ 74%] MorphIO-3.4.0/tests/test_5_mut.py::test_remove_unifurcations PASSED [ 74%] MorphIO-3.4.0/tests/test_5_mut.py::test_remove_rootsection PASSED [ 75%] MorphIO-3.4.0/tests/test_5_mut.py::test_remove_rootsection_in_loop PASSED [ 76%] MorphIO-3.4.0/tests/test_5_mut.py::test_glia PASSED [ 76%] MorphIO-3.4.0/tests/test_5_mut.py::test_glia_round_trip PASSED [ 77%] MorphIO-3.4.0/tests/test_5_mut.py::test_dendritic_spine PASSED [ 77%] MorphIO-3.4.0/tests/test_5_mut.py::test_dendritic_spine_round_trip PASSED [ 78%] MorphIO-3.4.0/tests/test_5_mut.py::test_lifetime_destroyed_morphology PASSED [ 79%] MorphIO-3.4.0/tests/test_5_mut.py::test_lifetime_access_properties_no_morphology PASSED [ 79%] MorphIO-3.4.0/tests/test_5_mut.py::test_lifetime_copy_single_section PASSED [ 80%] MorphIO-3.4.0/tests/test_5_mut.py::test_lifetime_iteration_fails_with_orphan_section PASSED [ 80%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__maintain_children_order_non_root_section PASSED [ 81%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__maintain_children_order_non_root_section_multiple PASSED [ 82%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__maintain_children_order_root_section PASSED [ 82%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__unifurcation_bridge PASSED [ 83%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__remove_all_children PASSED [ 84%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__append_delete PASSED [ 84%] MorphIO-3.4.0/tests/test_5_mut.py::test_delete_section__traversals PASSED [ 85%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_empty_file PASSED [ 85%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_undefined_soma PASSED [ 86%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_soma_basic PASSED [ 87%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_basic PASSED [ 87%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_merge_only_child_asc_h5 PASSED [ 88%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_merge_only_child_swc PASSED [ 88%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_perimeter PASSED [ 89%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_no_soma PASSED [ 90%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_soma__points_no_diameters PASSED [ 90%] MorphIO-3.4.0/tests/test_6_writers.py::test_duplicate_different_diameter PASSED [ 91%] MorphIO-3.4.0/tests/test_6_writers.py::test_single_point_root_section PASSED [ 92%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_custom_property__throws PASSED [ 92%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_soma_types PASSED [ 93%] MorphIO-3.4.0/tests/test_6_writers.py::test_write_soma_invariants PASSED [ 93%] MorphIO-3.4.0/tests/test_6_writers.py::test_diameter_mismatch PASSED [ 94%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_no_modifier PASSED [ 95%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_nrn_order PASSED [ 95%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_nrn_order_stability PASSED [ 96%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_two_point_section PASSED [ 96%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_soma_sphere PASSED [ 97%] MorphIO-3.4.0/tests/test_7_modifiers.py::test_no_duplicate PASSED [ 98%] MorphIO-3.4.0/tests/test_8_all_morphologies.py::test_all SKIPPED (ba...) [ 98%] MorphIO-3.4.0/tests/test_9_surfaces.py::test_stacked_cylinder PASSED [ 99%] MorphIO-3.4.0/tests/test_9_surfaces.py::test_contour PASSED [100%] ================= 162 passed, 1 skipped, 8 deselected in 0.65s ================= + RPM_EC=0 ++ jobs -p + exit 0 Processing files: morphio-3.4.0-7.fc42.aarch64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.geYmPh + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + LICENSEDIR=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/LICENSE.txt /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio + RPM_EC=0 ++ jobs -p + exit 0 Provides: libmorphio.so.0.0.0()(64bit) morphio = 3.4.0-7.fc42 morphio(aarch-64) = 3.4.0-7.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.310()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: morphio-devel-3.4.0-7.fc42.aarch64 Provides: cmake(MorphIO) cmake(morphio) morphio-devel = 3.4.0-7.fc42 morphio-devel(aarch-64) = 3.4.0-7.fc42 morphio-static = 3.4.0-7.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: cmake-filesystem(aarch-64) libmorphio.so.0.0.0()(64bit) Processing files: python3-morphio-3.4.0-7.fc42.aarch64 Provides: python-morphio = 3.4.0-7.fc42 python3-morphio = 3.4.0-7.fc42 python3-morphio(aarch-64) = 3.4.0-7.fc42 python3.13-morphio = 3.4.0-7.fc42 python3.13dist(morphio) = 3.4 python3dist(morphio) = 3.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.310()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(numpy) >= 1.14.1 rtld(GNU_HASH) Processing files: morphio-doc-3.4.0-7.fc42.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.JiGqFL + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + DOCDIR=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/AUTHORS.txt /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/CHANGELOG.md /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/CONTRIBUTING.md /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/README.rst /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/examples /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/doc/morphio-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ws157f + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + cd MorphIO-3.4.0 + LICENSEDIR=/builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio-doc + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio-doc + cp -pr /builddir/build/BUILD/morphio-3.4.0-build/MorphIO-3.4.0/LICENSE.txt /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT/usr/share/licenses/morphio-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: morphio-doc = 3.4.0-7.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: morphio-debugsource-3.4.0-7.fc42.aarch64 Provides: morphio-debugsource = 3.4.0-7.fc42 morphio-debugsource(aarch-64) = 3.4.0-7.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: morphio-debuginfo-3.4.0-7.fc42.aarch64 Provides: debuginfo(build-id) = 5a034077f031561ded8ab7da6f9fa8802eb9ab12 libmorphio.so.0.0.0-3.4.0-7.fc42.aarch64.debug()(64bit) morphio-debuginfo = 3.4.0-7.fc42 morphio-debuginfo(aarch-64) = 3.4.0-7.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: morphio-debugsource(aarch-64) = 3.4.0-7.fc42 Processing files: python3-morphio-debuginfo-3.4.0-7.fc42.aarch64 Provides: debuginfo(build-id) = eff9d17c5af3e8d2a88104f995d8090936b7c907 python-morphio-debuginfo = 3.4.0-7.fc42 python3-morphio-debuginfo = 3.4.0-7.fc42 python3-morphio-debuginfo(aarch-64) = 3.4.0-7.fc42 python3.13-morphio-debuginfo = 3.4.0-7.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: morphio-debugsource(aarch-64) = 3.4.0-7.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/morphio-3.4.0-build/BUILDROOT Wrote: /builddir/build/SRPMS/morphio-3.4.0-7.fc42.src.rpm Wrote: /builddir/build/RPMS/morphio-3.4.0-7.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-debugsource-3.4.0-7.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/python3-morphio-3.4.0-7.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-devel-3.4.0-7.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/morphio-doc-3.4.0-7.fc42.noarch.rpm Wrote: /builddir/build/RPMS/morphio-debuginfo-3.4.0-7.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/python3-morphio-debuginfo-3.4.0-7.fc42.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.2i06Qh + umask 022 + cd /builddir/build/BUILD/morphio-3.4.0-build + test -d /builddir/build/BUILD/morphio-3.4.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/morphio-3.4.0-build + rm -rf /builddir/build/BUILD/morphio-3.4.0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild morphio-3.4.0-7.fc42.src.rpm Finish: build phase for morphio-3.4.0-7.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1733998956.949809/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/morphio-3.4.0-7.fc42.src.rpm) Config(child) 2 minutes 50 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "morphio-debuginfo", "epoch": null, "version": "3.4.0", "release": "7.fc42", "arch": "aarch64" }, { "name": "morphio-debugsource", "epoch": null, "version": "3.4.0", "release": "7.fc42", "arch": "aarch64" }, { "name": "morphio-doc", "epoch": null, "version": "3.4.0", "release": "7.fc42", "arch": "noarch" }, { "name": "python3-morphio", "epoch": null, "version": "3.4.0", "release": "7.fc42", "arch": "aarch64" }, { "name": "python3-morphio-debuginfo", "epoch": null, "version": "3.4.0", "release": "7.fc42", "arch": "aarch64" }, { "name": "morphio-devel", "epoch": null, "version": "3.4.0", "release": "7.fc42", "arch": "aarch64" }, { "name": "morphio", "epoch": null, "version": "3.4.0", "release": "7.fc42", "arch": "aarch64" }, { "name": "morphio", "epoch": null, "version": "3.4.0", "release": "7.fc42", "arch": "src" } ] } RPMResults finished