%{?python_enable_dependency_generator} %global pkgname Theano %global srcname theano %global commit 819122e66bcd089b2a3f472542800feead0bf755 Name: python-%{srcname} Version: 1.0.13 Release: 3%{?dist} Summary: Mathematical expressions involving multidimensional arrays License: BSD URL: https://docs.pymc.io/PyMC3_and_Theano.html Source0: https://github.com/pymc-devs/%{pkgname}-PyMC/archive/rel-%{version}.tar.gz # Workarounds for ppc64le test failures. # FIXME: diagnose each of these and find code fixes # - The final assertion in test_nlinalg fails. # - An unexpected GradientError is thrown at theano/gradient.py line 1790. Source1: %{name}-ppc64le.patch # Fix the blas interface; see https://github.com/Theano/Theano/issues/6518 # If we fix the Fedora numpy package to specify flexiblas in its __config__.py # file, we can discard this patch. Patch0: %{name}-blas.patch # Do not try to invoke git to find the commit Patch1: %{name}-git.patch # Fix documentation bugs resulting in sphinx warnings Patch2: %{name}-doc.patch # Close files when they are no longer needed Patch3: %{name}-file-leak.patch # Fix a call to a deprecated function in the printing code Patch4: %{name}-printing.patch # Fix parsing of the numpy version Patch5: %{name}-numpy-version.patch BuildArch: noarch BuildRequires: gcc-c++ BuildRequires: gcc-gfortran BuildRequires: git-core BuildRequires: pkgconfig(flexiblas) BuildRequires: tex(latex) BuildRequires: tex(anyfontsize.sty) BuildRequires: tex-dvipng BuildRequires: python3-devel BuildRequires: python3-pygpu-devel BuildRequires: %{py3_dist cython} BuildRequires: %{py3_dist numpy} BuildRequires: %{py3_dist parameterized} BuildRequires: %{py3_dist pydot} BuildRequires: %{py3_dist pygments} BuildRequires: %{py3_dist pytest} BuildRequires: %{py3_dist scipy} BuildRequires: %{py3_dist setuptools} BuildRequires: %{py3_dist six} BuildRequires: %{py3_dist sphinx} BuildRequires: %{py3_dist sphinx-rtd-theme} %global _desc %{expand: Theano is a Python library that allows you to define, optimize, and evaluate mathematical expressions involving multi-dimensional arrays efficiently. Theano features: - tight integration with NumPy: Use numpy.ndarray in Theano-compiled functions. - transparent use of a GPU: Perform data-intensive calculations up to 140x faster than with CPU (float32 only). - efficient symbolic differentiation: Theano does your derivatives for function with one or many inputs. - speed and stability optimizations: Get the right answer for log(1+x) even when x is really tiny. - dynamic C code generation: Evaluate expressions faster. - extensive unit-testing and self-verification: Detect and diagnose many types of mistake.} %description %_desc %package -n python3-%{srcname} Summary: %{summary} Requires: flexiblas-devel Requires: gcc-c++ Requires: gcc-gfortran Recommends: python%{python3_version}dist(pygpu) Suggests: python%{python3_version}dist(pydot) %description -n python3-%{srcname} %_desc %package doc Summary: Theano documentation Requires: font(fontawesome) Requires: font(lato) Requires: font(robotoslab) %description doc User documentation for Theano. %prep %autosetup -n %{pkgname}-PyMC-rel-%{version} -p0 # We don't need to use /usr/bin/env for fil in $(grep -FRl /bin/env .); do sed -ri.orig 's,( )?(/usr)?/bin/env[[:blank:]]*python.*,%{_bindir}/python3,' $fil touch -r $fil.orig $fil rm $fil.orig done # We don't have a git checkout, so don't invoke git to find the commit sed -i 's/@@tag@@/%{commit}/' doc/conf.py %build # Regenerate the Cython files cython -3 -o theano/scan/c_code/scan_perform.c \ theano/scan/scan_perform.pyx %py3_build # Build the documentation export PYTHONPATH=$PWD %{python3} doc/scripts/docgen.py --nopdf rst2html --no-datestamp README.rst README.html # Remove build artifacts rm -fr html/.buildinfo html/.doctrees %install %py3_install # Restore executable permission on the scripts chmod a+x $(find %{buildroot} -name \*.py -o -name \*.sh | xargs grep -l '^#!') # Do not ship the tests rm -fr %{buildroot}%{python3_sitelib}/tests %check # Workaround for ppc64le test failures; see comment above Source1. if [ "$(uname -m)" = "ppc64le" ]; then patch -p0 < %{SOURCE1} fi pytest %files -n python3-%{srcname} %doc DESCRIPTION.txt HISTORY.txt NEWS.txt README.html %license doc/LICENSE.txt %{_bindir}/theano-* %{python3_sitelib}/Theano*.egg-info/ %{python3_sitelib}/theano/ %{python3_sitelib}/bin/ %files doc %doc html %changelog * Wed Jan 27 2021 Fedora Release Engineering - 1.0.13-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild * Mon Jan 11 2021 Jerry James - 1.0.13-2 - Add -numpy-version patch to fix FTBFS (bz 1914890) * Thu Dec 24 2020 Jerry James - 1.0.13-1 - Version 1.0.13 * Mon Nov 23 2020 Jerry James - 1.0.11-1 - Version 1.0.11 - Switch to the PyMC fork, now the official version - Drop the -future-warning patch; it yields incorrect answers - Test with pytest instead of nose * Fri Aug 7 2020 Jerry James - 1.0.5-1 - Version 1.0.5 - Drop upstreamed patches: -ceil-floor-trunc, -clip, -format, -gammaq, -has-sorted-indices, -is, -iterable, -ordered-dict, -random, -sort, -sphinx3, -traceback - Add patches: -file-leak, -printing - Build with flexiblas instead of with openblas directly * Wed Jul 29 2020 Fedora Release Engineering - 1.0.4-6.2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Tue May 26 2020 Miro Hrončok - 1.0.4-6.1 - Rebuilt for Python 3.9 * Tue Feb 4 2020 Jerry James - 1.0.4-6 - Add -ordered-dict patch, thanks to Miro Hrončok (bz 1797982) * Thu Jan 30 2020 Fedora Release Engineering - 1.0.4-5.1 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild * Mon Nov 25 2019 Jerry James - 1.0.4-5 - Drop epydoc BR since it has been retired - Unbundle fonts from the documentation - Ship an HTML form of the README - Add -has-sorted-indices patch * Thu Oct 03 2019 Miro Hrončok - 1.0.4-4.1 - Rebuilt for Python 3.8.0rc1 (#1748018) * Thu Aug 29 2019 Jerry James - 1.0.4-4 - Add -iterable, -git, -format, -is, and -doc patches to fix warnings * Fri Aug 23 2019 Robert-André Mauchin - 1.0.4-3 - Fix FTBFS with python-theano-sort patch (#1737011) * Mon Aug 19 2019 Miro Hrončok - 1.0.4-2.1 - Rebuilt for Python 3.8 * Fri Aug 16 2019 Jerry James - 1.0.4-2 - Add -future-warning, -gammaq, -ceil-floor-trunc, -traceback, -clip, and -random patches to fix FTBFS (bz 1737011) * Fri Jul 26 2019 Fedora Release Engineering - 1.0.4-1.2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Sat Feb 02 2019 Fedora Release Engineering - 1.0.4-1.1 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Sat Jan 19 2019 Jerry James - 1.0.4-1 - New upstream release * Thu Dec 27 2018 Igor Gnatenko - 1.0.3-2 - Drop duplicated dependencies * Sat Oct 6 2018 Jerry James - 1.0.3-1 - New upstream release - Partially revert the previous commit; the gcc Requires is needed - Build with openblas instead of atlas - Send cython output to the correct directory - Build with pygpu support * Sun Aug 12 2018 Igor Gnatenko - 1.0.2-2 - Drop python2 subpackage * Sat Jul 14 2018 Fedora Release Engineering - 1.0.2-1.2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Miro Hrončok - 1.0.2-1.1 - Rebuilt for Python 3.7 * Wed May 23 2018 Jerry James - 1.0.2-1 - New upstream release * Fri Feb 09 2018 Fedora Release Engineering - 1.0.1-1.1 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Fri Dec 22 2017 Jerry James - 1.0.1-1 - New upstream release - Add -blas patch to fix compilation errors when using the blas interface - Reenable the tests - Pass nose flags to prevent memory exhaustion while running the tests * Fri Nov 17 2017 Igor Gnatenko - 1.0.0-1 - Update to 1.0.0 * Thu Jul 27 2017 Fedora Release Engineering - 0.9.0-1.1 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Wed Mar 22 2017 Jerry James - 0.9.0-1 - New upstream release * Sat Feb 11 2017 Fedora Release Engineering - 0.8.2-1.3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild * Mon Dec 19 2016 Miro Hrončok - 0.8.2-1.2 - Rebuild for Python 3.6 * Tue Jul 19 2016 Fedora Release Engineering - 0.8.2-1.1 - https://fedoraproject.org/wiki/Changes/Automatic_Provides_for_Python_RPM_Packages * Thu Apr 21 2016 Jerry James - 0.8.2-1 - New upstream release * Fri Apr 15 2016 Jerry James - 0.8.1-2 - Remove python2 dependency from the python3 subpackage (bz 1324232) - Recommend pydot instead of requiring it * Sat Apr 2 2016 Jerry James - 0.8.1-1 - New upstream release - Fix the pydot dependencies * Wed Mar 23 2016 Jerry James - 0.8.0-1 - New upstream release * Thu Feb 04 2016 Fedora Release Engineering - 0.7.1-0.2.a1 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild * Mon Feb 1 2016 Jerry James - 0.7.1-0.1.a1 - Comply with latest python packaging guidelines * Thu Nov 12 2015 Igor Gnatenko - 0.7.1-0.1.a1 - Update to 0.7.1a1 * Tue Nov 10 2015 Fedora Release Engineering - 0.7.0-2.2 - Rebuilt for https://fedoraproject.org/wiki/Changes/python3.5 * Wed Nov 4 2015 Toshio Kuratomi - 0.7.0-2.1 - Fix python3 package requiring python2. * Thu Jun 18 2015 Fedora Release Engineering - 0.7.0-1.1 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild * Wed Apr 1 2015 Jerry James - 0.7.0-1 - New upstream release - Drop upstreamed -arm patch - Regenerate cython files to fix build failure * Sat Feb 21 2015 Jerry James - 0.6.0-5 - Add -arm patch to fix build failure on arm builders due to inverted test * Sat Feb 21 2015 Jerry James - 0.6.0-4 - Drop workaround for fixed bug (bz 1075826) - Use license macro * Sat Jun 07 2014 Fedora Release Engineering - 0.6.0-3.1 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild * Wed May 14 2014 Jerry James - 0.6.0-3 - Rebuild for https://fedoraproject.org/wiki/Changes/Python_3.4 * Thu Mar 13 2014 Jerry James - 0.6.0-2 - Add python3 subpackage - Add another icon to the -missing tarball - Update source icons - Unbundle python-six - Add workaround for bz 1075826 * Sat Dec 7 2013 Jerry James - 0.6.0-1 - New upstream release - Drop upstreamed -import patch * Mon Oct 21 2013 Jerry James - 0.6.0-0.1.rc3 - Add the -import patch to fix an exception - Add more files to the base package docs * Tue Aug 27 2013 Jerry James - 0.6.0-0.rc3 - Initial RPM